Marmota marmota marmota (Alpine marmot): 107152628
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Entry
107152628 CDS
T09644
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04613
Neutrophil extracellular trap formation
mmma05034
Alcoholism
mmma05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
107152628 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
107152628 (Hdac9)
09165 Substance dependence
05034 Alcoholism
107152628 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107152628 (Hdac9)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107152628 (Hdac9)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107152628 (Hdac9)
BRITE hierarchy
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
107152628
NCBI-ProteinID:
XP_048655616
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MAGFCSLFDFLLIVRCSFINSLMPTSQIQLLSLPPRYAVFIKSWRSKEMSWKTDFASVAS
EKFRRTGLVFETTAHFGKEGMHNRTDGVCTGASLLGPEAVPGHGPCRYQGRYMLAEQSRG
SSLLSSIFTGQLPRKKLGAGLHEVPELLCSWQPSPDGVAGREQLLAQQRMHSMISSVDVK
SEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQ
HENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLPPLR
GKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQS
SPPLSGTSPSYKYTLPGAQDTKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDG
NVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHAEQLVSQQR
ILIHDDSMNLLSLYTSPSLPNITLGLPAGPSQLNASNSLKEKQKCETQTLRQGVPLPGQY
GGSVPASSSHPHVALEGKPNSSHQALLQHLLLKEQMRQQKLLVTGGVPLHPQSPLATKER
ISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLS
KSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSDNSSRSDSSACVDDTLGQVGAVKVKE
EPVDSDEDAQIQEMESGEQAAFMQQQPFLEPPHTRALSARQAQLAVVGMDGLEKHRLLSR
THSSPAASILPHPATDRPLQPGSATGIAYDPLMLKHQCVCGSSTTHPEHAGRIQSIWSRL
QETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTGPLDGQKLDPRILLGDDSQKFFSS
LPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASRVASGELKNGFAVVRPPGHHAEESA
AMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEG
NFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTVLMPVAKEFDPDMVL
VSAGFDALEGHTPPLGGYKVTAKCFGHLTEQLMTLADGRVVLALEGGHDLTAICDASEAC
VNALLGNELEPLAEDILHQTPNMNAVTSLQKIIEIQSKYWKSVRMVAVPRGCALPGTQLQ
EETETVSALASLTVDVEQPFAQEDSRTAGEPMEEEPAL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttctgtagtctatttgacttcttattaatagtaagatgttcattcattaac
tctctcatgcctacaagccagatacagttgctctctctgccccctcgttatgctgtcttc
ataaagtcatggcgtagcaaggaaatgagctggaaaactgattttgcttctgtagcatca
gaaaagttcagaaggactgggctagttttcgaaaccacagcacactttggtaaagaggga
atgcacaacagaacggatggtgtctgcactggtgcttcattgcttggacctgaggcagtg
cctggacatggaccgtgcaggtaccagggcagatatatgctagcagagcagagtagagga
tcatcactcctctccagcatattcacaggccaacttccaagaaagaagctgggagctggg
ctgcatgaagtgccggagctcctgtgtagctggcagccctctcccgatggggtggctgga
cgggagcagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtgaag
tcagaggttccagtgggtctggagcccatttcgcctttagacttaaggacagacctcagg
atgatgatgcctgtggtggaccctgttgtccgtgaaaagcaactgcagcaggagttactt
cttatccagcagcagcaacaaatccagaagcaactcctgatagcagagtttcagaaacaa
catgagaacttgacccggcaacaccaggctcagcttcaggaacacatcaagttgcaacag
gaacttctagccataaaacagcaacaagaactcctagaaaaggagcagaaactggagcag
cagaggcaagaacaggaagtagagaggcatcgcagagaacagcagcttcctcctctcaga
ggcaaagatagaggacgagaaagggcagtggcaagtacagaagtaaagcagaagcttcaa
gaattcctgttgagtaaatcagcaacgaaagacactccaactaatggaaaaaatcattcc
gtgagccgccatcccaagctctggtacacggctgcccaccacacatcattggatcaaagc
tctccgcccctaagtggaacatctccatcctacaaatacacattaccaggagcacaagat
accaaggacgattttccccttcgaaaaactgcctctgagcccaacttgaaggtgcggtcc
aggttaaaacagaaagtggcagagaggagaagcagccccttactcaggcggaaggatgga
aatgttgtcacttcattcaagaagcgaatgtttgaggtgacagaatcctcagtcagtagc
agttctccagggtctggccccagttcacccaacaatgggccaactggaagtgttactgaa
aatgagacttcggttttgccccctactcctcatgcagagcagctggtttcacagcaacgc
attctaattcatgacgattccatgaacctgctaagtctttatacctctccttctttgccc
aatatcaccttgggacttccagcaggaccatcccagctcaatgcttcgaattcgctcaaa
gaaaagcagaagtgtgagacacagacgctcaggcaaggtgttcctctgcctgggcagtat
gggggcagcgtcccagcatcttcaagccatcctcacgtggctttagaggggaagcccaac
agcagccaccaggctctcctgcagcatttattattgaaagaacaaatgcggcaacaaaag
cttcttgtgactggtggagttcccttacatcctcagtctcccttggcaacgaaagagaga
atttcacctggtattagaggtacccacaaacttccccgtcacagacccctgaatcgaacc
cagtcggcacctttgcctcagagcacgttggctcagctggtcattcagcagcaacaccag
caattcctggagaagcagaaacaataccagcagcagatccacatgaacaaactgctttcg
aaatctattgaacaactgaagcaaccaggcagtcacctggaggaagctgaggaagagctt
cagggggaccaggccatgcaggaagacagagcgccctctagtgacaacagcagtaggagc
gacagcagtgcttgtgtggatgacacactgggacaagttggggctgtgaaggtcaaggaa
gagccagtggacagtgatgaagatgctcagatccaggaaatggaatctggggagcaggct
gcttttatgcaacagcagcccttcctggagcccccgcacacacgtgcgctctcggcgcgc
caggctcagctggctgtggttggcatggatggattagagaaacatcgccttctctccagg
actcattcttcccctgctgcctccattttaccacaccctgcaacggaccgccccctccag
cctggctctgcaactggaattgcctatgaccctctgatgctgaaacaccagtgcgtttgt
ggcagttccaccacccaccctgagcatgctggacgaatacagagcatctggtcacggctg
caagaaactgggctgctaaataaatgtgagaggattcaaggtcgaaaagccagcttggag
gaaatacagcttgttcattctgaacatcactcactgttgtatggcaccggccccctggat
ggacagaagctggaccccaggatactcctaggtgatgactctcaaaagtttttttcctcc
ttaccttgtggtggacttggggtggacagtgacaccatttggaacgagctgcactcgtcc
ggtgctgcacgcatggctgttggctgtgtcatcgagctggcttccagagtggcctcagga
gagctgaagaatgggtttgctgttgtgcggcccccaggccatcacgctgaagaatctgca
gccatggggttctgcttttttaattcagttgcaattaccgccaaatacttgagagaccaa
ctaaatataagcaagatattgattgtagatctggatgttcaccatggaaacggtacacag
caggccttttatgctgaccccagcatcctgtacatttcactccatcgctatgatgaaggg
aactttttccctggcagtggagccccaaatgaggttgggacaggccttggagaaggctac
aatataaatattgcctggacaggtggccttgatccccccatgggagatgttgagtacctt
gaagcattcaggactgtcctgatgcctgtggccaaagagtttgatccagacatggtcctg
gtttccgctggatttgatgcattagaaggccacacccctcctctgggggggtacaaggtg
acagcaaagtgctttggtcatttgacggagcaactgatgacactggctgatggacgtgtg
gtgttggctctggaaggaggacacgatctcacggccatctgtgatgcgtcggaagcctgt
gtaaatgcccttctaggaaatgagctggagccacttgctgaagatattctccatcaaacc
ccgaacatgaatgctgttacttctttacagaagatcattgagattcagagcaagtactgg
aagtcggtaaggatggttgctgtgccaaggggttgtgctctgcctggcactcagttgcaa
gaagagacagagaccgtttctgctctggcctccctgacggtggatgtggaacagcccttt
gctcaggaagacagcagaactgctggtgagcccatggaagaggagccagccttgtga
DBGET
integrated database retrieval system
