KEGG   Marmota marmota marmota (Alpine marmot): 107152988
Entry
107152988         CDS       T09644                                 
Symbol
Cul4b
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03420  Nucleotide excision repair
mmma04120  Ubiquitin mediated proteolysis
mmma05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107152988 (Cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107152988 (Cul4b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    107152988 (Cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmma04121]
    107152988 (Cul4b)
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107152988 (Cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmma04147]
    107152988 (Cul4b)
Ubiquitin system [BR:mmma04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     107152988 (Cul4b)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107152988 (Cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107152988 (Cul4b)
Exosome [BR:mmma04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107152988 (Cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 107152988
NCBI-ProteinID: XP_015353992
Ensembl: ENSMMMG00000006513
LinkDB
Position
Unknown
AA seq 876 aa
MFPTGFSSPNPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSSNSSNEREDFD
STSSSSSTPPLQPRDSASPSTSSYCLGVSVAASSHVPIQKKLRFEDTLEFVGFDAKMAEE
SSSSSSSSSPTAATSQQQQQLKNKSILISSVASVHHANGLAKSSTTVSSFANSKPGSAKK
LVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANL
YKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVL
QNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLS
DLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTT
QKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIE
YIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINKRP
NKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLL
VGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQVKYMQNQNVPGN
IELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKA
EFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLA
KNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAI
VRIMKMRKTLSHNLLVSEVYNQLKFPVKVGTYMFSY
NT seq 2631 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttttcttcccccaatccctcagctgctgctgctgctcaggaggtc
agatctgccactgatggtaataccagcaccactccgcccacctctgccaagaagagaaag
ttaaacagcagcagcagcagtagcagcagtaacagtagtaacgagagagaagactttgat
tccacgtcttcctcctcctccactcctcctttacaacccagggattcggcatccccttca
acctcgtcctactgcttgggggtttcagtggctgcttccagccacgtaccgatacagaag
aagctgcgttttgaagacaccctggagtttgtagggtttgatgcgaagatggctgaggaa
tcctcctcctcctcctcctcatcttcaccaactgctgcaacatctcagcagcagcagcaa
cttaaaaataagagtatattaatctcttctgtggcttcggtgcatcatgcaaacggccta
gccaaatcatctaccaccgtctctagctttgctaacagcaagcctggctctgctaagaag
ttagtgatcaagaactttaaagataaacctaaattaccagaaaactacacagatgaaaca
tggcagaaactgaaagaagcagtggaagctattcagaatagtacttcaattaaatacaat
ttagaagaactctaccaggctgtagaaaatctctgttcttacaagatttctgcaaacttg
tacaaacagctgagacagatttgtgaagatcatatcaaagcacagattcatcaattcaga
gaggattcattggatagtgttctttttctaaagaagattgacagatgctggcagaatcat
tgtaggcaaatgatcatgatcaggagcatttttttgtttctggatagaacttatgttctt
cagaattcaatgctaccctctatttgggacatgggactggagttatttagggctcatatt
ataagtgatcagaaagtccaaaataagacaattgatggcattcttctcttgatcgagaga
gaaagaaatggtgaagcaattgatagaagtttactccgaagccttttaagcatgctctct
gatttgcaaatttatcaagattcttttgaacaacgatttttggaagaaactaatcggctc
tatgcagctgaaggccaaaagttgatgcaagaaagagaggttcctgaatatcttcatcat
gttaacaaacgtctagaagaagaagcagacagacttattacttacttagatcagactacc
cagaagtcattaattgctactgtagaaaaacagcttctaggtgaacacttaacagctatt
cttcaaaaaggtttaaataatcttcttgatgaaaaccgaattcaagatttatctctcctg
tatcaactctttagcagagttcgaggtggcgttcaggtgctcttgcaacaatggattgaa
tatatcaaggcatttgggagcactattgttattaatcctgaaaaagataaaactatggtt
caagaattgctagattttaaagataaggttgaccatataattgatatctgctttctgaag
aatgaaaaatttatcaatgccatgaaagaagcttttgaaacattcattaacaaaagacca
aataaacctgctgaacttatagctaagtatgtagattcaaagcttcgtgcaggaaacaaa
gaagctacagatgaagaacttgagaaaatgttggataaaattatgatcatatttagattt
atctatgggaaggatgtttttgaagccttctataagaaggatttagccaagcgcctatta
gttggaaagagtgcatctgtagatgctgaaaaatcaatgctgtccaaacttaaacatgaa
tgtggagctgcttttaccagcaaacttgaaggaatgtttaaagacatggaactttctaaa
gacatcatgattcagttcaaacaggtaaaatatatgcagaatcagaatgtacctgggaat
attgaattaactgtgaatatcctgacgatgggttattggccaacatatgtgcctatggaa
gtccatttgccaccggagatggtaaaacttcaggaaattttcaagacattttacctaggc
aaacatagtggcaggaaacttcagtggcaatcaaccctaggacactgtgtgctaaaagca
gaatttaaagagggtaaaaaagaactccaggtctctctttttcaaacactggtgctgcta
atgtttaatgagggagaggagttcagtttagaagagatcaagcaagctaccgggatagag
gatggagagttaaggagaacactgcaatcattagcctgtggcaaagctagagttctggca
aaaaatccaaagggcaaagatatcgaagatggtgacaagttcatttgtaatgatgatttc
aaacacaaacttttcaggataaagatcaatcaaatccagatgaaagaaacggttgaggag
caagcaagcactacagaaagagtatttcaagatagacagtatcaaattgatgctgcaatt
gttcggattatgaagatgaggaagacacttagtcacaatctccttgtttctgaagtgtac
aaccagttaaaatttccagttaaggtaggtacttacatgttttcatattaa

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