Marmota marmota marmota (Alpine marmot): 107153084
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Entry
107153084 CDS
T09644
Symbol
Psmb1
Name
(RefSeq) LOW QUALITY PROTEIN: proteasome subunit beta type-1
KO
K02732
20S proteasome subunit beta 6 [EC:
3.4.25.1
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03050
Proteasome
mmma05010
Alzheimer disease
mmma05012
Parkinson disease
mmma05014
Amyotrophic lateral sclerosis
mmma05016
Huntington disease
mmma05017
Spinocerebellar ataxia
mmma05020
Prion disease
mmma05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107153084 (Psmb1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
107153084 (Psmb1)
05012 Parkinson disease
107153084 (Psmb1)
05014 Amyotrophic lateral sclerosis
107153084 (Psmb1)
05016 Huntington disease
107153084 (Psmb1)
05017 Spinocerebellar ataxia
107153084 (Psmb1)
05020 Prion disease
107153084 (Psmb1)
05022 Pathways of neurodegeneration - multiple diseases
107153084 (Psmb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmma01002
]
107153084 (Psmb1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mmma03051
]
107153084 (Psmb1)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
107153084 (Psmb1)
Peptidases and inhibitors [BR:
mmma01002
]
Threonine peptidases
Family T1: proteasome family
107153084 (Psmb1)
Proteasome [BR:
mmma03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
107153084 (Psmb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Cytochrom_C1
FAM165
Motif
Other DBs
NCBI-GeneID:
107153084
NCBI-ProteinID:
XP_015354064
Ensembl:
ENSMMMG00000007812
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MSSAVSRWGCGGQPEMEALGAAGPXRLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGF
SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLS
TILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQV
GFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcagtctcgcgctggggttgcggcgggcagccggagatggaggcgctgggc
gccgcgggtcctnggcggctgcgcttctcgccctacgccttcaacggaggtactgtattg
gcaattgctggtgaagacttttcgattgttgcttctgacactcggctcagtgaaggcttt
tctattcacactcgggacagccccaaatgttacaagttaacagacaaaacagtcattgga
tgtagcggttttcatggagactgccttaccctgacaaagattattgaagcaagactgaag
atgtacaagcattccaataataaggccatgacaacgggggccattgctgcgatgctgtct
accatcctgtactcaaggcgcttcttcccatactatgtctacaacatcatcggtggactt
gatgaagaaggaaaaggagctgtgtacagctttgacccagtaggctcctaccagagagac
tccttcaaggctggaggctcagcaagtgctatgctgcagcccctgctcgacaaccaggtt
ggtttcaagaacatgcagaatgtggagcatgtgccattgtctttggacagagccatgagg
ctggtgaaagatgtcttcatttctgcagctgagagggacgtatacaccggggatgccctc
aggatctgcattgtgaccaaagagggaatccgggaggagactgttcccctgcggaaggac
tga
DBGET
integrated database retrieval system
