Marmota marmota marmota (Alpine marmot): 107153511
Help
Entry
107153511 CDS
T09644
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107153511 (Nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107153511 (Nfrkb)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107153511 (Nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
107153511
NCBI-ProteinID:
XP_015354525
Ensembl:
ENSMMMG00000002220
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPHFPADSVEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFHRLLKQILASRSDLLEMARRSGPTLPFRQKRPSPSRS
PEEREWRTQQRYLKVLREVKEECGDTAPSSDEEATLDLQEKFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLSTTDMKTTDKIELGDSDLKIMLKKHHEKRKHQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKLIKSEAEDLAETLSNTEGVPPLSQ
APSPLAIPSIKEEPLEDLKPCLGINEISSSFFSLLLEILLLENQASLPMLEERVLDWQSS
PASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNE
KELAALFQLWLETKDQAFCKQENEDSSDATTPVPRVRTDYVVRPSTGEEKRVFQEQERYR
YSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAA
RLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWI
YLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSSKETSLKVLSSGPSEQSQM
SLSDSSMPPTPVTPVTPTTPALPTTPISPPPVSSVNKSGSTSVSEPAKSSSGVLLVSSPT
MPQLGTMLSPASSQTPPSSQAAARVVSHSGSAGLPQVRVVAQPSLPAVPQQSAGPAQTLP
QMPPGPQIRVPATATQTKVVPQAVMATVPIKAQTGAPSVQRPGPMQTGLTVTSLPAAASP
VSKPATSSPGSSAPSASTTAVIQNVTGQNIIKQVAITGQLGVKPQTGNSIPLTATNFRIQ
GKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGGGTAGKGISA
TLHVTSNPVHATDSPAKASSANAPSSAPAGTTVVKVTPDLKPAEPSSSAFRLMPALGVSV
ADQKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVASGSGTVHSSA
VSLPSMNAAVSKTVAVASGAANTPISIGTGAPTVRQVPVSTTVVSTSQAGKLPTRITVPL
SVISQPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQ
QLQQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccatatgctgacagatcccctggaactaggtccatgtggagatggc
catggtacacgaattatggaagactgcctcttgggaggcaccagagttagtctacctgag
gaccttctggaggatcctgagatattctttgatgtcgtcagtctctcaacatggcaggaa
gtattaagcgactctcagcgggaacacctccagcagtttctgcctcattttcctgcagac
agtgtggagcagcagaatgaactcatcctagctctgttcagtggggagaactttcgcttt
ggaaaccctttacacattgctcagaagcttttccgagatggacactttaaccctgaggtg
gtcaagtatcgacagctatgcttcaagtcacagtacaagcgatacctcaactctcagcag
cagtatttccatcgactgctaaagcagattcttgcttcccggagtgacttactggagatg
gcccgaaggagtggcccaacccttcccttcaggcagaagcgtccttcaccatcccgaagc
cctgaggagcgggagtggcggacccagcagcgctacttgaaggtcttgagggaagtgaag
gaggagtgtggcgacactgccccgtcctctgatgaagaggccacgttggatttacaagaa
aaattttcttttgaagatctcagctcatggcttccgagctctccagcgcgttctcctagt
cctgcggtgcccctgagggtggtgcccacgctttccaccacggatatgaaaactacagat
aaaatagaactgggggacagtgacctgaagataatgttaaagaagcaccatgagaagcgg
aaacatcaaccagatcacccggaccttttgacaggggacctgaccctcagtgacatcatg
actcgagtaaatgctggcaggaagggctcactagcagccttatatgacttggctgtcctt
aaaaaaaaggtgaaggaaaaagaggaaaagaaaaagaagaaaataaagctgatcaaatca
gaggcagaggatctggctgaaactctgagcaacactgaaggggttccacctctttcacag
gccccatctccactggcaataccttctatcaaggaagagcccctggaagacctcaagcct
tgccttggaatcaatgagatttcttccagttttttctctcttctattagagatcttgctt
ctggagaatcaagctagccttcctatgctggaggaaagagttttggattggcagtcatct
ccagccagctccctcaacagctggttctctgcagcccccaactgggctgagttggtattg
cctgccctccagtatcttgctggagaaagccgagctgttccttccagtttctctccattt
gttgaattcaaagagaaaacccagcagtggaaattgcttggccagtctcaagataatgaa
aaggaattagctgcgctcttccagctgtggctagagaccaaagaccaggccttttgtaag
caagaaaatgaagacagctcagatgctacaacacctgtccctcgggtaagaactgactat
gtggtgcggcccagcactggggaggagaaacgggtttttcaggagcaggagcgttacaga
tacagccaaccccataaggcattcacctttcgcatgcatggctttgagtctgtggtgggg
ccagtgaagggtgtgtttgacaaggagacttccctcaacaaagctcgggaacattccctt
ctgcgctctgaccggcctgcctatgtcaccatcctgtctcttgttcgggatgcagcagct
cggctgcctaatggagaaggcacacgggcagagatctgcgaactgctcaaggactcccag
tttcttgcaccagatgttaccagcactcaggtcaacacagtagtgagtggtgccctggat
cgactacattatgaaaaagatccttgtgtgaaatatgacattggacggaagctgtggatc
tacctgcatcgtgaccggagcgaagaagagtttgagcggattcaccaagcacaagcagct
gcggctaaagccagaaaagcccttcagcaaaaacccaagcccccttccaaggtgaagtcc
agtagcaaggagacttcattaaaagtcctcagcagtggaccttctgagcaaagccagatg
agcctcagtgactctagtatgccacccaccccagtaactcctgtaacccccaccacacca
gcattgcctaccactccaatttcccctccgcctgtgtcatcagtgaacaaaagtggctct
acttctgtctcagaaccagctaagtctagttcaggggttcttctggtgtcctcaccaaca
atgccacagctaggaacaatgctatccccagcttccagccagactccacccagttcacag
gctgctgcccgggttgtaagccactctggctcagctggactgccccaggtgcgggtggtg
gctcaacctagccttcctgctgtcccacagcagtcagcaggaccagcacagacactgcca
cagatgccaccaggaccacagatccgggtgccagccactgccacacagaccaaagtagta
ccccaggcagtcatggccactgttccaatcaaagcacaaactggggcacccagtgtacag
cggcctggacccatgcagacagggcttacggtgacaagtctccctgctgcagccagccct
gtgagcaagccagccacaagttcccctgggagctcggctccaagtgcctctacaactgca
gtcattcaaaatgttacaggacagaacatcatcaagcaggtggccatcactgggcagctt
ggtgtgaagccccagacaggcaacagcatcccactcacagccacaaacttccgaattcag
ggtaaggatgtactgcgactgccgccctcttccatcaccacagatgccaagggccagacg
gttcttcgaatcacaccggacatgatggccacattggctaagtcccaggttaccacagta
aaattgactcaggacctcttcgggacaggaggtggtactgcaggcaaaggcatctctgcc
accttacatgtcacttccaatccagtccatgcaactgatagccctgccaaggccagttca
gccaatgctccttcatctgctccagcaggcaccactgtggtcaaagtgactcccgacctc
aagccagcagagccctccagttcagcttttcgcttgatgccagcccttggtgtgagtgtg
gcagatcagaagggaaaaaatacagtggcctcttcagaagcgaagccagctgccacaatt
cgcatcgtgcagggcctgggagtaatgcctcccaaagcaggccagaccatcactgttgca
gcccatgccaagcaaggggcctcagtggccagtgggtctggaactgttcattcttcagca
gtatccttgcccagtatgaatgctgctgtgtccaagactgtggctgtagcttctggggct
gcaaacacacccatcagcatcgggacaggagcccccactgtgcggcaggtccccgtcagc
accacggttgtgtccacgtcccaggctgggaagctacctacacggatcacagttccactg
tctgtgattagccagccaatgaagggcaagagtgtggtcacagcccctatcatcaaaggc
aacctgggagccaacctgagtgggttgggccgcaatatcatcctcaccaccatgccagca
ggtactaagctcattgctggcaataagcctgttagtttcctcactgcccagcagttgcag
caacttcagcagcaaggtcaggccacacaggtgcgcatccagactgtccccgcatctcat
ctccagcagggcacagcttctggttcctccaaagcagtctccactgttgttgtgaccaca
gctccatctcctaaacaggcacctgaacagcagtga
DBGET
integrated database retrieval system
