Marmota marmota marmota (Alpine marmot): 107153710
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Entry
107153710 CDS
T09644
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107153710 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107153710 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107153710 (Nup54)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107153710 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
107153710
NCBI-ProteinID:
XP_015354759
Ensembl:
ENSMMMG00000006548
UniProt:
A0A8C6EQH4
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAFNFGAPSGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQQNTLGGLFSQPAQAPTQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKILGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
SELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNEAIHVRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttggggctccctcgggcacctcgggcaccgctgcagccaccgcggca
cccgccggtgggtttggaggatttggtacaacatctacaactgcaggttctgcgttcagc
ttttctgccccaactaacacaggcactactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaacaggaactagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttaacacacagcagcagcaacagcagcaaaat
acattaggtggtctcttcagtcaacctgcccaagctcctacccagtccaaccagctgata
aatactgcaagtgctctttctgctccaacactattgggagatgaaagagatgctattttg
gcaaaatggaatcaactgcaggcattttggggaacaggaaaaggatatttcaataataat
attccaccagtggaattcacgcaagaaaatcccttttgccgatttaaggcagtaggttat
agttgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaag
gaaacagatattcgaagccaacaacagcagttggtagaatcattgcacaaaattttggga
ggaaaccagaccttaactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttatgttgttgaacgttctccaaatggtacatcaagaagagttccagct
acaacattatatgcacattttgaacaagctaatataaaaacacaattgcagcaacttggt
gtaacactttctatgactagaacagaactatctcctgcacagattaaacagcttttacag
aatcctcctgctggtgttgatcctattatttgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtaccaatggtgggtttcaaagagctgctacgaagattgaag
gttcaggatcagatgactaagcagcatcagaccagattagatattatatctgaagatatt
agtgagctacaaaagaatcaaactacaactatggccaaaattgcacaatacaagaggaaa
ctcatggatctttcccatagaaccttacaggtcctaatcaaacaggaaattcaaaggaaa
agtggttatgccatccaagctgatgaagagcagctgcgggttcagctagatacaattcag
tgtgaactgaatgcacctactcagttcaaaggccgactaaatgaactgatgtcccaaatc
agaatgcaaaatcattttggagcagtcaaatctgaagaaagatattatatagatgcagat
ctattgcgagaaataaagcagcatttgaaacaacaacaggaaggccttagtcacttgatt
agcatcataaaagatgatctagaagacattaagttggtagaacatggattgaatgaagcc
atccatgtcagaggtggtgtctttagttga
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