Marmota marmota marmota (Alpine marmot): 107153909
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Entry
107153909 CDS
T09644
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma03015
mRNA surveillance pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107153909
09122 Translation
03013 Nucleocytoplasmic transport
107153909
03015 mRNA surveillance pathway
107153909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107153909
03041 Spliceosome [BR:
mmma03041
]
107153909
03009 Ribosome biogenesis [BR:
mmma03009
]
107153909
03012 Translation factors [BR:
mmma03012
]
107153909
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107153909
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107153909
mRNA cycle factors
Stress granule specific factors
107153909
Spliceosome [BR:
mmma03041
]
Complex C
Other components
EJC/TREX
107153909
Ribosome biogenesis [BR:
mmma03009
]
Eukaryotic type
90S particles
Helicases
107153909
Translation factors [BR:
mmma03012
]
Eukaryotic type
Initiation factors
eIF-4
107153909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
107153909
NCBI-ProteinID:
XP_048657516
Ensembl:
ENSMMMG00000013633
UniProt:
A0A8C5ZID9
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYTYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTPA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
SFTVSSMHEDMPQKERESIMKEFRSGASRVLISTDFWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacggccacgatggcgacttcgggctcggcacggaagcgtctgctcaaagag
gaggacatgaccaaagtggagttcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaggacctgctgcgcggcatctacacctatggttttgaaaaa
ccatcagcaatccaacagcgagctatcaagcagataattaaagggagagacgtcattgca
cagtcccaatctggtacaggcaagacagccaccttcagtatttcagtcctccagtgttta
gacatacaggttcgagaaacccaggctttgatcttggctccaacaagagagttagctgta
cagattcaaaagggcctgctcgctctgggagactacatgaatgtccagtgccatgcctgt
attgggggcaccaacgtcggggaggacatccggaagctggactatgggcagcatgttgtc
gctggcactccagggcgtgtctttgatatgattcgtcgcagaagtttaaggactccggca
atcaagatgctggttttggatgaggctgatgagatgttgaataaaggtttcaaagagcag
atttacgatgtgtaccggtacctgcccccagccacacaggtggtcctcatcagcgccact
ctgcctcacgagatcctggaaatgaccaacaagttcatgacagaccccatccgtatcctg
gtgaagcgtgatgaactgaccctggaaggcatcaaacagtttttcgtggcagtggaaaga
gaagagtggaagtttgacaccttgtgtgacctctatgacactctgaccatcactcaggcg
gtcatcttctgtaacaccaagaggaaggttgactggctgacggagaaaatgagagaagcc
agtttcaccgtgtcctcaatgcacgaagacatgcctcagaaggagcgggagtccatcatg
aaggaattccggtctggtgccagccgagtgctcatttccacagacttctgggcccggggg
ctggatgtcccccaggtatccctcatcatcaactatgacctgcccaacaacagagaactg
tacatacacagaattgggagatcgggtcgatatggcaggaagggtgtggccatcaatttt
gtgaagaatgatgacatccgcatcctcagagacatcgagcagtactattccactcagatt
gacgaaatgcctatgaatgttgctgacctgatctga
DBGET
integrated database retrieval system
