Marmota marmota marmota (Alpine marmot): 107153960
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Entry
107153960 CDS
T09644
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107153960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107153960
Spliceosome [BR:
mmma03041
]
Complex C
Other components
Step II factors
107153960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
107153960
NCBI-ProteinID:
XP_015355034
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSAAAVDTVNAAPLSGSKEMNLEEPKKMTREDWRKKKELEEQRKLGNSPAEVDEEGKDIN
PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGAC
ENCGAMTHKKKDCFERPRQVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMK
IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQTEKDHNSEDEDE
DKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANT
GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVK
KEDFKEQQKESILEKYGGQEHLDAPLAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYE
EDVKIHNHTHIWGSYWKDGRWGYKCCHSFFKYSYCTGEAGKDIVNSEECIINDVSGEESV
KKPQTLMVT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgcagctgtggacacggttaatgctgcacccttatcagggtccaaagaaatg
aatttggaggaaccaaagaagatgactcgagaggactggagaaagaagaaggagctagaa
gaacagcgaaaactgggtaattctccagcagaagttgatgaagagggaaaagacatcaac
cctcatattcctcagtatatttcttcagtgccatggtatattgatccatcaaaaagacct
actttaaagcatcagagaccacaaccagagaaacaaaagcaattcagctcatctggggaa
tggtacaagaggggagtaaaagagaattctataactactaagtaccgcaaaggagcgtgt
gaaaattgtggggccatgacacacaaaaagaaagactgctttgagagacctaggcaagtt
ggagccaaatttacaggtactaatatagctccagatgaacatgtccagcctcaactgatg
tttgattatgatgggaaaagagatcggtggaatggctataatccagaagaacacatgaaa
attgtggaagaatatgccaaagttgatctggccaaacgaactttgaaagcccagaaactg
caagaagaattagcctcaggaaaactagtggaacaagctaattctccaaaacaccagtgg
ggagaagaggaaccaaattctcaaacggaaaaagatcacaacagtgaagatgaggatgaa
gacaaatatgcagatgatattgacatgccaggacagaattttgactctaagagacgaatt
actgtccggaatctcaggattcgagaagatattgcaaaatacttgagaaatttagatcca
aattctgcctactatgatccaaaaactagagcaatgagagagaatccttatgccaacacc
ggaaagaatccagatgaagtgagttatgcaggagataactttgttagatacacaggagat
accatctcaatggctcagacacagttgtttgcttgggaagcctatgacaaaggatctgaa
gtgcatctacaggcagatcctacaaaactagagctgttgtataagtccttcaaagtcaaa
aaggaagacttcaaagaacagcaaaaagaaagcatcctagaaaagtatggtggccaagaa
cacttggatgctcctctagctgaattgcttttagcccagaccgaagactatgtagaatac
tcaagacatggtacagtcatcaaaggacaagagcgagctgttgcctgctccaaatatgag
gaggatgtaaagatccacaaccatacacatatctggggatcttactggaaggatggccga
tggggatacaaatgctgtcactcttttttcaagtattcctattgtactggagaagctgga
aaggatattgttaattcagaagaatgtattataaatgatgtaagtggagaagaatctgtg
aaaaaacctcaaaccctcatggtaacataa
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