Marmota marmota marmota (Alpine marmot): 107153964 Help Entry 107153964         CDS       T09644                                  Symbol Rttn Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism mmma  Marmota marmota marmota (Alpine marmot) Brite KEGG Orthology (KO) [BR:mmma00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:mmma03037]     107153964 (Rttn) Cilium and associated proteins [BR:mmma03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    107153964 (Rttn) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N Motif Other DBs NCBI-GeneID:  107153964 NCBI-ProteinID:  XP_048662589 Ensembl:  ENSMMMG00000018533 LinkDB All DBs Position Unknown AA seq 2250 aa AA seqDB search MVLSGLIRKLGHQLAEIRERALRSIICKVEHNLIGYADLIQERLLFLRLLEWFNFPSVPM KEDVLSLLSRLVKYPPAVQHLVDLGAVEFFSKLRPNVEPNLQTEIDGILDGLFVLLSEAP VLYSASHQTNQTEMSQQPEILIGYFPQDKSNFQQTEVPVPPVGKSFLRMPDPFMINQAQC SDQPQVSQTVKCLKFSTFPWLPLTTTDRHVLSSNESSLRSSNQTLIWNTCELLKDVIMQD FPAEIFLQRPKIVQNLLSLLKLAFGGDGKHRLALQAVSCLQQLCIYLRNRLNFHRDPHFF SNKQDIISQNSSLSYCHEVRVIHHSPNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSS GSNSHAHINSRISILSPLDMGHIDLPELETEDTLELQFQQLSLPQFCVFILESAVPLLKT GSRQMIMRVLELLAEDMILIGEAISADIWDDKSLFAINMKEKLLLVFGSLGETMCYHKSS VDLEQTEMLLVHHRMAFVSTSLFAVRLLQTLLPVEKASEFLPETMSTALFLLSLDMPVSL EYPTIHEAVVAYLEQLNSENYSIYKRAAEAIYSIECTCNFLSDVGKEGEKNLLELVELAD QALCSFSYHQHFPLIKEIICICSKIWKSAQASPLLQGESQKVFLHMLSHPLPQVKAETYN CCLEMVKECLGVHNVTKPVSSLCNGIHFLLHPKVLYEISAFGMQEPQNEVNAAAKAILLY LLQGRMMMTLLTWNKFIESLCPVLPVLQGYADLEDSLGNCILLLSQAGSEAGEGILPCTT RLKSVLRLLLVKKLSVRSLALKLLAFYLANEEGADTKRPIIDARILSRVTNLFIVKKPIE LKLDDRKELLIKLDTVEKVHEIFTSDDVDLVLRKSAAEQLAVILQDIKMHAAVKKLCLID KIIEYLNECVGQDGKVVECLVQPCLTLLRKVLCADPVMRVSLSQQSSLLTLLFRVSLIFH EDCTVVTEVAALFCLLLFDEVSRMEMWSVNPSSNPSLPSVFSLPVSIFRRYHLPVHVIGH HAVSPYAIVLPLSDFLALKPVSDMLRIAWNLSWYHGSDNLLKQVNSGTDNQEFLDTLKLS TKDSLIVKITYAASGLQDCFCSIVQATAHRDVRAAVTRMSFYLLNDKLSLKGGIGPCGVA LKSLAWHTVLNRFLQVLPACTEDEKLLIDIIHFLNKLMKEQRKNPSVEFLNWILELLLRH SPNPLLDLLVLTETQAREEIDDIRTAIRQQLQKELIALFNTLLLSFMAVTDRECLELLYV FQTQLALKLLQCLRVTDAPHFYGLPSLERTLRGMAHLTAFQGWSSHSPLTRPLDICMKYL SGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMAHARSSEWISLWFLPLGS LSEEQTPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTFEAGCVALTNSCQNISGGLWG TVVNILLDQSECSMVRREAAFILQNLLVIPMPMETIKDYTWQGPCVHDEDSGLSLIGKPA LQALLYHCHFYEHLNQMVKHCYLGLYRFDLNSSAFVISEGRDSNGLDDSFKFWRAPSRMS SQDHDPSSLSTTETMVAASVGSAEIQPPVQSVVLLPEASRDQPMAQGEHEPTSSRPPPHS PLSAPLPQQCVFVTASLLSAICSLLDNLLVIAPRDTVNAFGKAHLIELLCGIVDATFIEA CVQELRTSLPSSPPVEHVQAQVSFFLEYLSSLSRLLQSCLLVEPNLVTQDDLLKPLINNI IRVLTVCINNALDVELISAFYHTWTHLFDLLAALLRKAGAVSHSSITSALARHWAAMMDV FCECVGLSSRCPALYTASLHFLSVLLTEEARRHCQDKDKASSLSHPTITSLLDETQDNQK SPDRLNEVILQCYEGKSSRDTLKRVAANALLSLLAVSRRTQKHALKADLIDNCMEQMKHI NAQLNLDSLRPGKAVLKKKEDGFIKELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSL WPWLLMDDSLMQNALQLLCVYTANFPNGCSSLCWSSYGQYPVHAAHRGASSSSLMLCILK LASQMPLENTNIQQTVFLFLSNLALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNLTI LWLKLLLNISFGEDGQQMILRLDGCLDLLTEISKYKHKSSPYIPLLIFHNICFSPANKPK ILANEKVITILAACLESKNQNAQRIAAAALWALTYNYQKAKTTLKNPSIKRKVDEAYSLA KKAFSNPEESPLNAYHLKCLENLVHLLSSS NT seq 6753 nt NT seq  +upstreamnt  +downstreamnt atggtcttgagcgggctcatcaggaaactcggtcaccagctggccgagatccgggagcgc gcgctccggagcataatctgcaaggtggagcacaacttaatcggctatgcggatctgatc caggagcggctgcttttcctccgcctgctggagtggttcaacttcccctcggttcccatg aaagaagacgtgctgagcctgctgagcagactggtcaagtatccccctgcagtccagcat ctggttgaccttggtgcagtagagttcttctctaagcttcgccctaatgtggagccaaat ctgcagactgaaatcgatggcattctggatggactctttgttcttctttcagaagctcct gtactgtattctgcctctcatcagaccaatcaaactgaaatgtcacaacaacctgaaatc ttaataggatatttcccccaagacaaaagtaatttccagcagacggaagtgcctgtgcca ccagtgggtaaaagttttctccgaatgccagatccttttatgataaatcaagctcaatgt tctgatcagccacaggtaagccagactgtgaagtgtttgaagttttctacgtttccttgg ctacccctgaccacaacagacaggcatgttctctcgtctaatgaaagctctttaagaagt agtaaccaaactttgatctggaatacctgtgaactattgaaggatgttatcatgcaagat ttccctgccgagattttccttcagaggccaaaaattgttcagaaccttttgtctctattg aaactggcctttggaggagatggaaaacatcgcttggcattacaggcggtgtcttgtctg cagcagctgtgcatatatttaagaaatagacttaactttcaccgagacccacattttttc tctaacaaacaagacataatttcccaaaactcttccttgtcttattgtcatgaagtaaga gttattcatcattccccgaacccatccccgggaagcagcagccctcggccttctgtggtg gggcgcacaggccaacggcccagaggagatggccaggactgggatgcagtgtcctccagc ggaagtaatagtcatgctcacataaactctaggatatctatcctttcacctttggatatg ggacacatagatcttccagaactagaaactgaagacacattggaactacaattccagcag ctgagtcttccccagttctgtgtcttcattctggaatcagcagttcccctcttaaaaaca ggcagtagacaaatgataatgagagttctagaattgcttgcagaggatatgatacttatt ggtgaagcaatttcagctgatatctgggatgacaaaagcctttttgctataaatatgaaa gaaaaactgctcctagtgtttgggtcccttggagaaaccatgtgttaccataagagtagc gttgatttagagcaaacagagatgctgctggtgcaccacaggatggcctttgtcagcacc tcactgtttgcggttcgcctgttgcaaacacttctccctgttgaaaaggcaagtgagttt ttaccagagacaatgtcaacagcattatttcttctttctttggacatgcctgtttcattg gaatatccaactattcacgaagctgttgtggcctatttggaacagctgaattctgaaaac tacagtatttataaacgagctgcagaggctatttattcaattgaatgtacctgtaacttc ctgtctgatgtggggaaggagggagagaagaatctcttagaattagtggagctagctgac caagccttgtgtagcttttcctatcatcagcatttccctctaataaaagaaatcatctgc atttgttcaaagatttggaaatctgcacaggccagtccactgctgcaaggagaaagtcag aaagtgttcctgcacatgttgtcccacccattgccacaagtgaaagctgaaacttacaac tgctgtctggagatggttaaggaatgtttaggtgtccataatgtcactaagcctgtatct tcactttgtaatggaattcattttctacttcatccaaaagttctgtatgaaatttctgct tttggtatgcaagaaccccaaaatgaggtgaatgctgctgccaaggccattctgctgtat ctgcttcagggacgaatgatgatgacactgctgacctggaacaagtttatcgagtctctc tgtcctgtccttccagtactgcagggttatgccgacctagaagactctttgggtaactgc attctccttctgagccaagcgggttctgaggcaggagaaggcatccttccttgtactacc cggctaaagtctgtcctgcgactcttgctggtgaaaaagctatcggtccgttcactagct ttgaagcttttagcattttatcttgccaatgaagaaggggccgatacaaaacgccccata atagatgccagaattctttccagagttactaatctatttattgtgaagaaacctattgaa ctcaaactggatgacagaaaagaattgcttattaagttggacactgttgaaaaagtacat gaaattttcacctcagatgatgttgatcttgttttgagaaagtcagctgcagaacagtta gctgtgattttgcaagatattaaaatgcatgctgcggtgaaaaagttatgcctaattgac aagataattgagtatttaaatgaatgtgtgggtcaagatggcaaggttgtagaatgtttg gttcagccctgcctcacactcctcaggaaagttttatgtgcggatccagtgatgcgtgtt tccctgtcacagcagtcttctctcttgaccctgttattcagagtttccttgatatttcat gaagattgtactgtagtgactgaagtcgcagcattgttttgtcttctgttatttgatgaa gtatcaagaatggagatgtggtctgttaatccttccagtaatccttctttgccatcagtc ttcagtttgcctgtttcaatttttagaaggtatcatctgccagttcatgtaatcggccac catgctgtgagtccttacgcaatagttctgccattatctgattttttggccttgaagcct gtatcagatatgctgagaatagcttggaacctgtcatggtatcatgggagtgataatcta ctgaagcaagtgaactccggaactgataatcaagaatttttagatacattgaagttatcc acaaaagacagcctcattgtgaagataacctacgcagccagtgggctgcaggactgcttc tgctccattgttcaggccacagcccacagggatgttcgggctgctgtcactcggatgagt ttttatctcctgaatgacaaattgtctttaaagggtggcattggcccatgtggggttgcc ttaaagtccttggcttggcacactgtgctaaacaggtttctacaagtgctccctgcttgt actgaagatgagaaactgctaatagatatcatacattttttaaataagttaatgaaggaa caaagaaaaaatccatcagtagaatttctaaactggattctagaattacttcttagacat agcccaaacccactcttagacctgctggttctgacagagactcaggcacgagaagaaata gatgacatccggactgctatcaggcagcaacttcagaaagaactgattgcacttttcaat accttgcttctcagtttcatggcagttactgacagggaatgcttggaacttctttacgtt ttccaaacacagctggctctgaaactgctccagtgcctgcgagtcacagatgcccctcat ttctatggcctgccttcccttgagcggacattacgagggatggctcacctcaccgcattt cagggatggagctcacattctcctctcacacggccacttgacatttgcatgaaatacttg tcaggtcttctggaggtcattacttctttttatgtggagcgtggaggaaacgcgatgtcc ttcatgggaaaaggtgttacaaagagcacagtcctttgtttgcttcacttgtcccatgag atgatggcccatgctcggagctcggagtggatttcactttggtttttacctttgggtagt ctcagtgaagaacagactcctactcaacaaggattggcttggttgattccattatgggtt gatcgggacccagaggtgagattcacttccctgggattaggatcagcactgactactttt gaagctggctgtgtggccttgacaaacagttgtcaaaacatttctggtgggctctgggga actgtggtgaatattcttctggaccagtcagagtgtagtatggtgcgccgtgaggctgca tttattcttcagaatctccttgtaattcctatgcctatggaaactataaaggattatact tggcagggcccttgtgttcatgatgaggactctggcctatcactcataggaaaacctgcc cttcaggctcttttatatcactgccatttttatgaacatttgaatcagatggtgaaacac tgttacctaggactgtataggtttgatttgaactcttctgcttttgtaatttcagaaggc agagattcaaatggtttggatgactcatttaagttttggagggctccatcaagaatgtcc agtcaagatcatgatccaagttctctctccaccacagaaacaatggtggcagcctcagtg ggcagtgctgaaatccagccacctgtgcagtcagtggtgctacttcctgaagcctcacgt gaccagccgatggctcaaggtgaacacgaacctacatcatcacggcctcctcctcattcg cccctgtctgctccactaccccaacagtgtgtttttgttactgcgtctcttctttcagcc atctgcagcctcttggacaacctcttggtgattgctccaagagacactgtgaatgctttt gggaaagctcatctcatagagcttctctgtggcattgtggatgccacctttattgaggcg tgtgttcaggaactcaggacctcactgccttcatcacccccagttgaacatgtccaggct caggtttcctttttcttggaatacctatcctctttgtccaggcttctgcagtcctgttta ttagtggaacctaacctcgtgacacaagatgatcttctgaaacctcttattaataatatc attagagttctcactgtatgcatcaacaatgcattagatgtagagttaatatcggctttt tatcacacctggacacacttatttgaccttctggctgcactcctgaggaaagctggtgct gtctcacactcgtctatcacctcggctctggccaggcactgggcagcaatgatggatgtg ttctgcgagtgtgtaggcttgtccagcagatgccctgccctgtacacggccagtttgcac ttcctgtctgttctcttgactgaggaggcaagaaggcactgccaggacaaagacaaagca agttcattgtctcatccaaccatcacatctcttcttgatgaaactcaggacaaccagaag tctccagatagacttaatgaagtaattcttcagtgctatgaaggaaagtcctccagagat accctgaaaagagtggctgcaaatgcgttgctgtcactcctggctgtcagcagaagaacc cagaaacatgctctgaaagctgatctcatagacaactgcatggagcagatgaagcacatt aatgcacaactgaacctcgattctctgcggcctggaaaagcagtactgaaaaaaaaggag gatggttttattaaagagttgagcattgccatgcagctcctaagaaactgcctttatcaa aatgaagaatgtaaagaagcggctcttgaagctcatcttgtccctgtcttgcactctctc tggccttggcttttgatggacgattcactgatgcagaatgccttgcagttgctttgtgtc tatactgcaaattttccaaatggttgcagttctctttgctggtcaagttatggacaatat cccgttcacgctgcacacagaggagcctccagcagctctctgatgctgtgtatcctaaaa ttggcctctcagatgcctctcgagaacaccaacattcagcagacggtttttctgtttctt tcaaacctggccttgtctcatgactgtaaaggagtaattcaaaagagtaacttcttacag aactttctgtctctaacattgccaaaaggaggaaataaacatctcagtaatctgaccatt ctttggttgaagttactcttgaatatatcttttggagaagatgggcagcaaatgatcctg aggcttgatggctgtttagacttacttactgagattagcaaatacaagcataagagcagc ccttacataccacttcttatttttcataatatttgcttcagtcctgcaaataagcccaag attctggctaatgaaaaagtcattaccatactagctgcctgtctggaaagtaagaatcaa aatgctcagaggattgcagcagctgcactttgggctttgacatataattaccagaaggcc aaaacaacgttgaaaaacccatcaataaaaagaaaagtagatgaagcatattccttagca aagaaagctttctcaaacccagaagaaagccctctaaatgcctaccatttgaaatgtctt gaaaacctcgtgcatctgctcagctcttcctga

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