Marmota marmota marmota (Alpine marmot): 107154713
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Entry
107154713 CDS
T09644
Symbol
Cltcl1
Name
(RefSeq) clathrin heavy chain 2 isoform X2
KO
K04646
clathrin heavy chain
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04142
Lysosome
mmma04144
Endocytosis
mmma04721
Synaptic vesicle cycle
mmma04961
Endocrine and other factor-regulated calcium reabsorption
mmma05016
Huntington disease
mmma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107154713 (Cltcl1)
04142 Lysosome
107154713 (Cltcl1)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
107154713 (Cltcl1)
09156 Nervous system
04721 Synaptic vesicle cycle
107154713 (Cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107154713 (Cltcl1)
09164 Neurodegenerative disease
05016 Huntington disease
107154713 (Cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107154713 (Cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107154713 (Cltcl1)
Membrane trafficking [BR:
mmma04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107154713 (Cltcl1)
Exosome [BR:
mmma04147
]
Exosomal proteins
Proteins found in most exosomes
107154713 (Cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
107154713
NCBI-ProteinID:
XP_015355884
Ensembl:
ENSMMMG00000002805
LinkDB
All DBs
Position
Unknown
AA seq
1640 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMNDPMA
PIRRPISAETAIMNPASKVIALKAGKTLQIFNIGLKSKMKSHTMAEEVLFWKWISVNTIA
LVTETVVYHWNMEGDSQPMKMFDRHASLAGCQMIHYRTDEYQKWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAAAFAEFKIEGNTKPVTLFCFAVRSSTGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKYGYLHMYDLESAVCIYMNRISA
DTIFVTVPHELTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRLAVRSNLPGA
EELFVRKFSTFFAQGNYAEAAKVAASAPKGILRTCDTVQKFQSIPAQPGQASPLLQYFGI
LLDQGQLNKLESLELCRLVLQQGRKQLLEKWLKEDKLECSEELGDLVKTAEPILALSVYL
RANVPSKVIQCFAETGQFQKIVLYSKKVGYIPDWISLLRSVMRISPEQGLQFSQMLVQDE
EPLANINQIVDIFMENSLIQQCTSFLLDILKNDHPAEGHLQTQLLEMNLIHAPQVADAIL
GNQMFTHYDRIHIAQLCEKAGLLQRALEHYSDINDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSMECLHAMLSANFRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHLKYIQAACKTGQIKEVERICRESSYYYPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYHNNLQKYIEIYVQKVNPSRLPAVVGGLLDVDCSEEVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHESCEEPATHNALAKIYIDSNNSPERFLRENAYY
DSSVVGQYCEKRDPHLACIAYERGQCDLELIQVCNENSLFKSEARYLVRRKDPELWTRVL
AETNPSRRHLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAADIASIAISSVLYEEAFTIFYKFGVNAS
AIQVLIENIGNLDRAYEFAEKCNEPAVWSQLAQAQLQKDLVKEAIDSYIRADDPTSYLEV
VQAATKSNNWEDLVKFLQMARKNSRASYIETELIFALAKTSRLSELEDCINAPNNANIQQ
VGDRCYEEGMYEAAKLLYNNISNFARLASALVHLGEYQAAVDSSHKANSTETWKEVCFAC
VDGQEFHLAQLCSLHIIIHADELEELIYYYQDRGYFEELMSLLEAALGLERAHMGMFTEL
AILYSKFKPQKMPEHLELFWSRVNIPKVLKAAEQAHLWAELVFLYDKYEEYDNAVLTMMS
HPTESWKEGQFKDFIAKVANIELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFS
KAGQLPLVKPYLCSVQNHNNKNVNEALNHLLTEEEDYQGLRASIYAYDNFDNISLAQRLE
KHQMIEFRRIAAYLYKGNNRWAQSVELCKKDHLYKDAMQHASESRDPELAEKLLQWFLEE
GKWECFAASLFTCYDLLHPDVVLELAWRHNLMDFAMPYFIQVMREFLNKVDKLDALESLH
KHEEHVGEPAPLVFDFDGHE
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctccctatccgcttccaggagcacttccagctccaaaacctaggaata
aatccagccaatattggatttagcacactgactatggagtctgacaagttcatatgtgtc
cgagagaaagtcggggagcaggcacaagtggtgattattgacatgaatgacccaatggca
cccatcagacgtcctatctcagcagagactgccatcatgaatccagcttctaaagtaata
gctctgaaagctgggaagactcttcaaatctttaatattgggctgaagagtaaaatgaag
tctcatactatggcagaagaggtgttattttggaaatggatctctgtgaacactattgcc
ttggtgactgagaccgtggtctaccactggaacatggaaggtgactcccagcccatgaag
atgtttgataggcatgctagtctggctgggtgccagatgatccactaccgaactgatgaa
taccagaagtggctgctccttattggcatctcagctcagcaaaaccgtgtggttggagca
atgcagctctattctgtggagaggaaggtttcacaacccatagaaggccatgctgctgcc
tttgcagagttcaagatagaagggaataccaagcctgtcactctcttctgctttgctgta
cgcagttccacaggaggcaagttgcacataattgaagttggacagcctgcagcaggaaac
cagccttttgtaaagaaagctgtggatgtgtttttccctccagaggcacagactgatttt
ccagtggctatgcagattggagctaaacatggagttatatatttgatcacaaagtacggc
tacctacatatgtatgatttagagtctgctgtgtgtatctacatgaaccgtattagcgct
gacacaatctttgtaactgttccacatgaactaacctctgggattattggtgtcaacaaa
aaaggacaggtgctgtcagtttgtgttgaggaagaaaacattgtgaattatgcaaccaat
gtgcttcagaatccagacctgggtctgcgtttggctgttcgtagtaacctgccaggggca
gaggagttatttgtgagaaaattcagtaccttctttgcacaggggaactatgctgaagcc
gccaaagtagcagcatctgcaccaaagggaattctacgtacctgtgatacagtccagaag
ttccaaagtatacctgcccagcctggccaagcctctcctttgctccagtactttggaatc
ctgcttgaccagggtcagctcaataaacttgaatctttagagctttgccggctagttctt
cagcaggggcgcaagcaactcttagagaagtggctgaaagaagataagctagagtgttca
gaggaactgggagatttggtcaaaactgctgaacctatactggctctgagtgtgtacctt
cgggcaaatgtaccaagcaaagttatccagtgttttgcagaaacaggccaattccaaaaa
attgtgctctattccaaaaaggttggttatatcccagactggatctctttgctgaggagt
gtgatgaggatcagtccagaacagggtctgcagttttcccaaatgctagtgcaggatgag
gagccattggccaacattaaccagattgtggacattttcatggaaaacagtttaattcag
cagtgtacttccttcttgctggacatcttgaagaatgatcacccagctgaggggcacctc
cagacccagctgttggaaatgaatctgatccatgcaccccaggttgcagatgccatcctt
ggaaatcagatgtttacacattatgatcgaatccatattgcccagctttgtgagaaggca
ggcctcctgcaacgggcgctagagcactacagtgacatcaatgacatcaagagggctgta
gtccacacccatcttctcaatcctgagtggcttgtcaatttctttggttccttgtcggtg
gaggattccatggagtgtctacatgccatgttgtctgctaacttcagacagaaccttcag
ctgtgtgtgcaggtggcttctaagtaccatgaacagctgggcacacagtccttggtagag
ctttttgaatccttcaagagttatgaaggcctcttctacttcctgggctcaattgtgaac
tttagccaagacccagatgtgcatttgaagtacattcaggctgcctgcaagacagggcag
atcaaggaggtggagagaatatgccgcgagagcagctactattacccagatagggtgaag
aatttcctaaaggaggctaagctcacagaccagctccccctcatcattgtgtgtgaccgc
tttgactttgtgcatgaccttgtcctgtatttataccacaacaacctgcagaagtacatt
gagatctacgttcagaaggtcaaccctagccgtctcccagctgtggttggagggctgctt
gatgtggattgttctgaagaagtaattaaaaacttaatcatggtggtgagaggacagttc
tctactgatgagctggtggctgaagtagaaaaaagaaacaggctcaaattgcttcttccc
tggctggagtctcggattcatgaaagctgtgaagagcctgccactcataatgcactagct
aaaatctacattgacagcaacaatagccctgagcgctttttgagagagaatgcctactat
gatagcagtgtggtgggccagtactgtgagaagcgggacccacatctggcctgcattgcc
tatgagcggggacagtgtgacctagagctcatccaggtttgcaatgaaaattctctgttc
aaaagtgaggcccgctacctggtacgcaggaaggatccagagctgtggacccgtgtcctt
gcagagaccaacccatctaggagacacctaattgaccaggtggtacaaacagcattatca
gaaacacaggatcctgaagaggtttcagtcactgtcaaagcctttatgacagctgacctc
cctaatgaattgattgaactactggagaagattgttctggataattctgtcttcagtgag
cacaggaatctccagaatctgctgatcctgactgccatcaaggcagatcgaacacgggtc
atggagtatatcagccgcctcgacaactatgatgctgcagacatcgcaagcattgccatc
agtagtgtgctgtacgaggaggccttcaccatcttctacaagtttggtgtgaatgcctca
gcgatccaggttctgattgagaatattggaaacctagaccgagcatacgagtttgcagaa
aaatgcaatgagcctgctgtgtggagtcagctggcccaagcacagcttcagaaggacttg
gtgaaggaagccatcgactcctacatcagagcagatgaccctacctcttacctggaagtt
gttcaggccgccaccaagagcaacaactgggaggatctagtgaaattcctgcagatggct
aggaaaaacagccgtgcatcctatatagagactgaacttatttttgcattggctaaaacc
agccgtctgtctgagctagaagattgcattaatgcacccaacaatgccaacatccagcag
gttggagaccgctgttatgaggaagggatgtatgaggctgccaaactgctatataacaat
atttctaactttgcccgcctggcttccgctttggtccacctgggtgagtatcaggcagca
gtggacagcagccacaaggccaacagcactgagacatggaaagaggtatgctttgcctgt
gtggatgggcaggagttccaccttgcacagctgtgtagccttcacatcatcattcatgca
gatgagctagaggagttaatatactattaccaggatcgaggatactttgaggagctcatg
tccctactagaagcagccctgggcctggagagggcccacatgggcatgttcactgagctg
gccattttgtactccaaattcaagcctcagaagatgccagagcacctggagctcttctgg
tcccgtgtcaacatcccaaaggtgctgaaggctgcagagcaggcacacctctgggcagag
ctggtgttcctctatgacaagtatgaggaatatgacaatgctgttctcaccatgatgagt
caccccactgaatcttggaaagaaggtcagttcaaggacttcattgccaaggttgccaac
attgagctctattataaagccctacagttctatttggactataagcctctgctcattaat
gacctgctattggtgctttcaccccggctggaccatacccggacagtcagtttcttttca
aaggcaggccagttgcccctagtgaagccttacctgtgttcagtccagaaccacaacaac
aaaaatgtgaatgaagcactcaaccatctgctgactgaagaggaagattatcagggcttg
agggcatctatctatgcctatgacaactttgacaacatcagcctggctcaacggctagag
aagcaccagatgatcgaatttaggcgcatagcagcctatctttacaagggcaacaatcgg
tgggcccagagtgtggaactctgcaagaaggaccatctctataaggatgccatgcagcat
gcctcagagtcgcgtgatcctgagctagcggagaagttgctacagtggttcctggaggaa
ggaaagtgggagtgttttgcagcctctctcttcacctgctatgatctgcttcacccagat
gtggtgcttgagctggcctggagacacaacctcatggattttgctatgccttacttcatt
caggtgatgagagagttccttaacaaagtggacaaactagatgccttggagagtctgcac
aagcatgaggagcatgtgggggagcctgccccacttgtgtttgattttgatggtcatgaa
tga
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integrated database retrieval system
