Marmota marmota marmota (Alpine marmot): 107154833
Help
Entry
107154833 CDS
T09644
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmma03009
]
107154833 (Ddx21)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107154833 (Ddx21)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107154833 (Ddx21)
Ribosome biogenesis [BR:
mmma03009
]
Eukaryotic type
Pre-60S particles
Helicases
107154833 (Ddx21)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107154833 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107154833
NCBI-ProteinID:
XP_015356043
Ensembl:
ENSMMMG00000007829
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MMPGKLRSDASLESDMAMEKLETRRKQNVKKDRKEQPKSNKTEECAEGKEETLTPKTKKV
KNKPGPSEADTNSPKSKKAKKQEEPTQDDIISPKTKSAKKKKEKEPLEKEVVSPKTKKVI
KNEEPSEEDVDAPKPKKMKKEKEVNGDIGEKSPKLKNGFSHSEPDSNEAASEESNSEIEQ
EIPVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKT
FSFAIPLIEKLQSELQDRKRGRPPQVLVLAPTRELASQVSRDFSNITKKLSVACFYGGTP
YGGQIEKMRNGIDILVGTPGRIKDHLQNGKLDLSKLKHVVLDEVDQMLDMGFADQVEEIL
CVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIK
CHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNASIKQDAQSLHGDIPQKQRE
ITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVC
ICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAINHFKES
AQKLIEEKGAVEALAAALAHISGATSVDQRSLINSEAGFVTMILRCSIEMPNISYAWKEL
KEQLGEDIDSKVKGMVFLKGKLGVCFDIPTTAVTEIQEKWHDSRRWQLTVATEQPELEGP
REGYRSFRGQREGSHGFRGQRDGKRSFRGQRGGSRNFRGGSGGGNKSNRSQNKGQKRSFS
KAFGQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgggaaaactccgtagtgacgccagtttggaatcagacatggccatggaaaag
ttggagacccggcgaaagcaaaacgtgaagaaagatagaaaagagcagccaaagtctaat
aagactgaagaatgtgcagaaggaaaagaagaaactcttacccccaaaaccaaaaaagtt
aaaaacaaaccagggccttctgaagctgatacaaattctcctaaatccaaaaaggcaaaa
aagcaagaggagcctactcaagatgacattatttctcctaaaaccaaaagtgcaaaaaag
aaaaaggaaaaggagcctcttgaaaaggaagttgtctctcctaaaaccaaaaaagtaata
aaaaatgaggaaccttctgaagaagatgtggatgctcctaaacccaagaaaatgaagaaa
gagaaggaagtaaatggagatattggagagaaaagtcccaaactaaagaacggattctct
cattctgaacctgactccaatgaagctgccagtgaagaaagtaacagtgaaatagagcag
gaaatacctgtggaacaaaaagaaggtgctttctctaattttcccatatctgaagagact
attaagcttctcaaagcccgtggagtgaccttcctgtttcctatacaagcaaagacattt
caccatgtctatagtgggaaggacttaattgcacaggcgcggacaggaactgggaagaca
ttctcctttgccatccctctgattgagaaacttcagagtgagctgcaagataggaaaaga
ggccgtccccctcaggttctggttcttgcacctacaagggagttggcaagtcaagtaagc
agagacttcagtaacatcacaaaaaagctttcagtggcctgtttttatggaggaactccc
tatggaggtcaaatcgaaaaaatgcggaatgggattgatatcctggttgggacgccaggt
cgtattaaagaccacctacagaatggcaagctagatctctccaaacttaaacatgttgtc
ctggatgaagttgaccagatgttggatatgggttttgctgatcaagtagaagagatttta
tgtgtggcatacaagaaagattctgaagacaatccccaaacattgcttttttctgcaaca
tgccctcattgggtatttaatgttgctaagaaatacatgaaatctacatatgagcaggtg
gacctgattggtaaaaagactcagaaaacagcaataactgtggagcatctagctatcaag
tgccactggactcagagggcagcagttattggagatgtgatccgagtgtatagtggtcat
caggggcgtactatcatcttctgtgaaaccaagaaagaagcccaggagctgtcacagaat
gcatctataaagcaggatgcccagtcattgcatggagacattccacagaagcaaagggaa
atcaccttgaagggttttagaaatggtgattttggagttttggtagccaccaatgttgct
gcacgtgggttagatatccctgaggttgatttggttgtacaaagctctccaccaaaggat
gtagagtcctacattcaccggtctgggcggacgggtagagctggaaggacaggagtttgc
atctgcttctatcaacacaaggaagaatatcaattagcacaagtggagcaaaaagcggga
attaaatttaaacgaataggtgttccttctgcaacagaaataataaaagcttccagcaaa
gatgccatcaggcttttagactctgtccctcctactgccattaaccacttcaaggagtca
gcccagaagctgatagaggagaagggagccgtggaggctttagcagcagctctggcacat
atttcaggtgccacatcagtagatcaacgctccttgatcaattcagaagcgggttttgtg
accatgatcttgaggtgctcaattgaaatgccgaatattagttatgcttggaaagaacta
aaagagcaactgggcgaggatattgattccaaagtgaagggaatggtctttctgaaagga
aagctgggtgtttgttttgatatccctactacagcagtcacagaaatacaggagaaatgg
catgattcacgacgctggcagctcactgtggccacagagcaacctgagctggaaggacca
cgggaaggatatcgaagcttcaggggtcagcgagaaggcagccatggtttcagaggacag
cgggatggaaaaagaagcttcaggggacagcggggaggaagtagaaacttcagaggagga
tcaggaggtggaaacaaaagcaacagatcccaaaacaaaggccagaagcggagttttagt
aaagcatttggtcagtga
DBGET
integrated database retrieval system
