Marmota marmota marmota (Alpine marmot): 107155008
Help
Entry
107155008 CDS
T09644
Symbol
Dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X2
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107155008 (Dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107155008 (Dcp1b)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107155008 (Dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
107155008 (Dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
107155008
NCBI-ProteinID:
XP_015356258
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYSFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKAHQGAAAGISPVMPNSGEGKEVDILRMLTKAKDEYTKYKTCSE
PKQITSSSAIYDNPNLIKPIPVKPSDNQQQLIPQPSQTLDPEPQHLSLTALFGKQDKAIC
PETVALPQTPQQQQQQQQQQQQEKFPVRQGVVRSLSYEEPRRQSPLMEKQLCPAIQKLMI
RNTDLHPLSELPEQRPCENGSSCSAREIIPGPLQPGSPHNVRTSHAGHSTSRTHNLLEKL
QSTPGAVNTYDLSTPGPVSPAAPNSSRTFSAATPVTPAKDLAQPQLVYFNGSLPPQMLGH
QAHGKGQSTLPRQMLPVSDSQTSSPGVISPQELLRKLQVVQQEQQLQTSHRPALAAKFPV
VTQSSRTGKPLEPWINRTSSTEKHAPLLQVISPQRTPATVAPSLLMSPMVFTKASGTPPR
ERDNGLLFLGGQELPAAPTSLLLPLQNPEPSVVAGSPLTRLQLQEALLYLVQNDDNFLNI
IYEAYLFSMTQAALKKTM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtggcggcgggcggcctggtggggaaggggcgcgacatcagcctagcagcc
ctgcagcgccacgacccctatatcaaccgcatcgtggacgtggctagccaggtggccctg
tactctttcggccatcgggccaacgagtgggagaagactgatgtggaaggaaccttattt
gtgtacacaaggtctgcttctccaaagcatggattcaccattatgaataggctgagcatg
gaaaatagaacagaacccattactaaagacctggatttccaactccaggaccctttcctc
ctctacagaaatgccagattgtccatttatggaatttggttttacgataaggaagaatgc
caaagaattgcagagcttatgaaaaacctaactcagtatgaacagttgaaagcccatcag
ggagctgcagcaggaatttccccagtgatgcccaattctggagagggcaaagaagtagat
atcttacgaatgcttaccaaagccaaagatgaatacacaaagtataaaacctgttctgag
ccaaaacagataacgagttcatctgccatctatgataaccctaatctcatcaaaccaatc
ccagtaaaacccagtgacaaccagcagcagctcatacctcagcccagccagaccttagac
cctgaaccccaacacttatccttgacagctctgtttgggaagcaggacaaagctatctgt
ccagaaactgtagcactcccccaaactccccagcaacaacagcagcagcagcagcagcaa
cagcaagagaaatttccagttaggcagggagttgtacgctccctgtcctatgaggagccc
agaaggcagtcgcctctcatggagaagcagctttgtccagccattcaaaaactcatgatc
agaaacacggacctgcacccactgtcagagctgcctgaacagaggccctgtgagaatgga
agctcctgttctgccagggaaattattcctggacctctccagccagggtctccccataac
gtcaggacttcacatgctgggcacagcacttccagaacgcacaacctgttagagaagctc
cagagtaccccaggggcagtgaacacgtatgaccttagtacaccaggccctgtgagccca
gctgcccccaacagcagcagaaccttctctgctgccactcctgtgactccagccaaggat
ctggcccagccacaattggtgtatttcaatggctcccttccacctcagatgctaggacat
caggctcatggaaagggacagtccaccctgccaagacaaatgctccctgtctctgacagt
cagacgagcagccctggagtgatctccccccaggagttactgagaaagctccaggttgta
caacaggagcagcagctacagacctctcaccgtccagccttggcagccaagttccctgtg
gtgacccagagctctaggacaggcaaacccttggagccatggatcaacaggacatccagc
acagagaagcatgctcctcttttgcaggtcatctcacctcagcgcactcctgctacagtg
gctccttctctgctcatgtcccccatggtgttcacaaaagcctctggcaccccaccgagg
gagagggataatgggctcttgttcctgggaggccaggaattgcctgctgcccctaccagc
ctcctcctgcccctgcagaacccggagccctctgtggtagctggcagcccactcaccagg
ctgcagctccaagaagcactgctatatctggttcagaatgacgacaacttcttaaatata
atctatgaagcctatctcttcagcatgacacaagcagccctgaaaaagactatgtga
DBGET
integrated database retrieval system
