Marmota marmota marmota (Alpine marmot): 107155072
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Entry
107155072 CDS
T09644
Symbol
Hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107155072 (Hfm1)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107155072 (Hfm1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107155072 (Hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
107155072
NCBI-ProteinID:
XP_048670428
Ensembl:
ENSMMMG00000024043
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MSKLNDCLFSVDSLFFENPDEIENYPDNEKSLDWFLPPPPLISEIPDTQELEEEIESHKL
QGQENNPKMLMSNLKITNEDINYISPTQKFQFPSYKYEYDYLNLGVAGINDSSHVAGKLT
YGSSQKYTNHMGTKIAPEETVPDDAKLGNVIEETGESTPAFRKRLFKICDSMHGGTYSNN
SANLDSGVNSVKIIQTEMNKEKSWNCSNNKQKPQSNMFIANEAFSSSEIGDDILKVPSFS
LASQPHNIQGVTRSGVGSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVIC
APTGSGKTVMFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPIGLNCK
ELTGDTVIDDLFEIQHAHIIMTTPEKWDSLTRKWRDNSLVQLVRLFLIDEVHVVKDEYRG
PTLEVVVSRMKTIQSLSQPLENTSTFIPMRFVAVSATIPNAEDIAEWISDGERPAVCLKM
DESHRPVKLRKVVLGFPCSSNQTEFKFDLTLNYKIPSVIQTYSDQKPTLVFCATRKGVQQ
AASVLVKDAKFIMTVEQKQRLQKYAYSIRDSKLRDILIHGVAYHHAGMELSDRKVVERAF
TTGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFDS
TATAVIMTRLNTREKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNVALEWIRST
LLYIRALKNPSHYGFTSGLNKDGIEAKLQELCLKNLNDLSSLNLIKMDEDVNFKPTEAGR
LMAWYYITFETVKKFCTISGKESLSDLVAMIASCNEFLDVQLRINEKKTLNTLNKDPNRV
TIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRITRWLSDFVAAQ
EKKFAVLLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNTMVNAGLTSFKKIEDTDAR
ELELILNRHPPFGTQIKEAVLYLPKYELEVEQITRYSDTVAEILVTIILRNFEQLQNKRT
APDSHYVTLIIGDADNQVVFKHRVMDSALIKTGNWTKKIDVKRALISEDLSINLISSDFV
GLDIQQKFTVFYLGPKRFGNQIIIQRKSEMEISHSKYSAGSTVAGPNKGITLCKKPGNRE
CNHHCKNKHTCGHDCCKTGVAQKSEIKESTISSYLSDLRNRNAVSSLPPVKRLKVQMNKS
QSVDLKGFGFTPKPSLPSLSRSEYLNIPELPVMEQCDQHEIHGKVQQEPSEYQDKNFFSW
NYSTTSKEKDPQTMTFNRNLNISGNQNLIDTDKSNSPFSEVLNVNFELGNEVWDDFDDEN
LIEVTNFSVDTKNIKTPGAENTLISSIRGSKLPFQQSKSKFQREMSNSFVSSHEKPAICL
SNSAMSKFDISSMTQLSQQAGNANIDHLQERKKQCLSPEIEKLSFTHFKNISNFSNSKKV
DFFFRNSESIKEVDSSRYHPDDEAEEMKSFLGIFDGIF
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaactaaatgactgcttgttttctgtggatagtttgttttttgaaaacccagat
gaaattgaaaactatccagacaatgaaaaatcattggattggtttctccctcctcctcca
ttgatttcagaaattccagatactcaggaattagaggaggaaatagaaagtcataaactg
caaggtcaagaaaataatccaaaaatgttaatgtcaaatttaaagattactaatgaagac
ataaattatatttcaccaacacaaaaattccagtttccctcttataaatatgaatatgat
tatctaaatttaggagtagcaggtattaatgactcatcacatgttgctggcaagctgaca
tatggttcttctcagaaatatacaaaccacatgggcaccaagatagcacctgaggaaact
gttcctgatgatgcaaaattaggtaacgttatagaggaaacgggagagagcacaccagca
tttcgaaaaagattatttaaaatatgtgacagtatgcatggaggtacttattctaataac
agtgcaaacttggactctggagttaactcagtgaaaattattcaaacagaaatgaacaag
gagaaatcatggaactgtagcaataataagcaaaaacctcaatcaaacatgtttatagca
aatgaagctttttcatcttctgaaattggagatgacatactcaaagtaccatcattttca
cttgcatcccaacctcataatattcaaggggtaaccagaagtggtgtaggttccttgaag
gctgtcacagaaattccggcaaaatttagaagtattttcaaagaattcccatatttcaac
tatatacagtccaaagcctttgatgatcttctttatacagatagaaattttgtaatttgt
gctccaactggttctggaaaaactgtaatgttcgaactagctataacaagattgttaatg
gaagtaccattgccatggttgaacattaaaattgtttacatggcaccaataaaagcccta
tgtagtcagcgttttgatgactggaaagaaaaatttggaccaattggattgaattgtaaa
gaactcactggagatacagttatagatgacctatttgagattcagcatgcccatattatt
atgacaactccagagaaatgggatagcttgactaggaaatggagagacaactctttggtt
caactggtgcgactatttctcattgatgaggtacatgttgtaaaagatgaatatcgtggt
ccaactcttgaagttgtagtcagcagaatgaaaactatacagtctttatctcagccttta
gaaaatactagcacttttatcccaatgagatttgtagctgtgtctgcaacaattccaaat
gctgaggatattgcagaatggatttcagatggtgaaagacctgctgtatgtctgaaaatg
gatgaaagccatagacctgtgaaacttcggaaagtggtcctgggatttccctgcagtagt
aaccaaactgaatttaagtttgatttaaccctcaactacaaaattcccagtgttatacaa
acatactctgatcagaagcccacacttgtgttttgtgcaactaggaaaggtgtgcaacag
gctgcttctgttcttgtgaaagatgctaaatttattatgactgtggaacagaaacaaagg
ttacagaagtatgcatattccataagagattcaaaactgagagatatcctaatacatggt
gttgcttatcatcatgctggcatggagctgtcagatagaaaagtagttgaaagagctttt
actactggagatctaccagttctttttactaccagtactttagctatgggagtaaacttg
cctgctcacctagtagttataaaatctacaatgcattatgctggagggatgtttgaagaa
tacagtgaaacagatattctacaaatgatcggtagagctggtcgtcctcaatttgactct
acagctacagcagttattatgactcggttaaatacaagagagaagtacattcaaatgtta
gcttgtagtgacactgtagaaagcagtttgcacagacatcttattgaacatttaaatgca
gagatagtattgcataccatcacagatgtgaatgttgctttggaatggatacgatcaact
ttgctttatatcagagccttgaaaaacccatctcattatggttttacatctggattgaac
aaagatggaattgaagcaaaattacaagaattatgtttgaagaatctgaatgatttgtca
tctcttaacttgataaagatggatgaagatgttaatttcaaaccaacagaggcaggaaga
ctgatggcttggtattatattacatttgaaacagtgaagaaattttgtacaatcagtgga
aaagaatctttatcagatctggttgcaatgatagctagctgcaatgaatttctagatgtg
cagttaaggataaatgaaaagaaaacactgaatactttgaacaaagatccaaatcgggta
accatcagatttccaatggaaggaagaattaaaacaagggaaatgaaagtaaattgtctt
atacaggctcaattaggatgtattccaatacaagattttgctttgacacaagacacctca
aagattttcagaaatggctcacgaattacaagatggttgtcagattttgtggctgctcag
gaaaagaagtttgccgtactgttgaatagtttgattttagctaaatgttttagatgcaaa
ctatgggaaaactctctgcatgtatccaaacagctagaaaaaattggtataacattgtca
aataccatggtaaatgcaggtttgacctcctttaaaaaaatagaagatacagatgcaagg
gaacttgaactgattttaaatagacaccccccttttggaacccaaataaaagaagctgtg
ttatatctgccaaaatatgaacttgaagtggaacagattacaagatatagtgatactgtg
gctgaaatattagtgaccattatattaaggaactttgaacagctacaaaataaaagaaca
gcaccagattctcactatgttaccttaatcataggtgatgcagataatcaagtggttttt
aagcacagagttatggattctgctttgatcaaaactggaaattggactaaaaaaattgat
gtgaagagagctcttatatctgaagatcttagcataaatctaattagttctgattttgtt
ggacttgatattcagcagaaatttacagtcttttacttaggacccaagaggtttggaaat
caaataattatacaaagaaaatcagaaatggagatttcccattctaaatattcagctgga
tctactgtagcaggccccaataaaggaataactctctgcaaaaaacctgggaaccgagaa
tgtaatcatcactgtaaaaataaacatacatgtggacatgactgctgtaaaactggagtt
gcacagaagtcagaaattaaagaatcaacaatttcttcatatttatctgatttaagaaac
aggaatgctgtttcatctcttcctccagttaaacgtctcaaggtacagatgaataaatct
caaagtgtggaccttaaagggtttggttttactcccaaaccttcccttcctagtttatca
aggtcagaatatttaaacatacctgaattgcctgtaatggagcaatgtgatcagcatgaa
atccatggaaaagttcaacaagagccatctgaatatcaagacaaaaatttttttagctgg
aactattctacaacttcaaaggagaaagaccctcaaacaatgacgttcaacagaaatctt
aatatatctggaaaccaaaatttgatagatacggataaaagtaattccccattttcagag
gttttgaatgtgaactttgaattgggaaatgaagtttgggatgattttgatgatgaaaac
ttaatagaagttactaacttttcggttgatactaagaatataaagacaccaggggctgaa
aacactttgatttcaagtatcaggggaagtaagctacctttccaacagtcaaagagcaaa
ttccaaagagaaatgtcaaacagttttgtttcgtcacatgagaagccagccatttgtttg
tcaaattctgctatgtccaagtttgatatatcctccatgacacaattatctcaacaagct
ggaaatgcaaatattgaccatttacaggaaagaaaaaagcaatgtttgtcaccagagatt
gagaaactgtcctttactcacttcaaaaatatatcaaatttttcaaattccaagaaagta
gattttttttttagaaacagtgaatccataaaggaagttgattccagtaggtatcatcct
gatgatgaagctgaggaaatgaagtcttttctgggaatatttgatggcattttctaa
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