Marmota marmota marmota (Alpine marmot): 107155201
Help
Entry
107155201 CDS
T09644
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03030
DNA replication
mmma03420
Nucleotide excision repair
mmma03430
Mismatch repair
mmma03440
Homologous recombination
mmma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107155201 (Rpa1)
03420 Nucleotide excision repair
107155201 (Rpa1)
03430 Mismatch repair
107155201 (Rpa1)
03440 Homologous recombination
107155201 (Rpa1)
03460 Fanconi anemia pathway
107155201 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107155201 (Rpa1)
03032 DNA replication proteins [BR:
mmma03032
]
107155201 (Rpa1)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107155201 (Rpa1)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107155201 (Rpa1)
DNA replication proteins [BR:
mmma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107155201 (Rpa1)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107155201 (Rpa1)
MMR (mismatch excision repair)
107155201 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
107155201 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-GeneID:
107155201
NCBI-ProteinID:
XP_015356492
Ensembl:
ENSMMMG00000024114
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGPLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMDLEVLKSAETVGMKIGNPVPYNE
GQGQQQVVPSPISAVSAPTSKPQQQNGSSGVGSTASKAFGAPKTFGKPGGTSLSYPSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVMPCEDDHHLPTVQF
DFTGIGDLENKPKDSLVDIIGICKSYEDATKITVKSTNREVSKRNIYLMDMSGKVVNATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSILSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFANFKYRMILSANIADFQENQWVTCFQESAEAIL
GQNAAYLGELKEKNEQAFEEVFQNANFRSFTFKIRVKLETYNDESRIKATVMDVKPVDYR
DYGKRLIMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaccgttgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacctatactccaggtcattaacatccgtcccatcacaacagggaatagtccaccg
cgctatcgactgcttatgagtgatggattgaacactctgtcatcttttatgttggcaaca
cagttgaaccctcttgttgaggaagaacggttgtccagtaattgtatttgccaaattaac
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggacttagaa
gttttgaaatcagctgaaacagttggaatgaaaattggtaatccagtgccctataatgaa
ggacaagggcagcagcaagtagttccttcccccatctcagcagtcagtgcaccaaccagc
aagccccagcaacagaatgggagctcgggagtgggttctactgcatctaaggcttttggt
gctccaaagacatttggaaaacctggaggaaccagcctatcatatccttctggggggaca
cagtccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcaaatccgtacctggagcaattctcgaggagaagggaaa
cttttttctatagaactggttgatgaaagtggtgaaatcagagctactgcattcaatgaa
caagtggacaagttctttccccttattgaagttaacaaggtgtattatttctcaaaaggc
accctgaagatcgctaacaaacaattctctgctgttaaaaatgactatgaaatgactttc
aataatgagacttctgtcatgccttgtgaagatgatcatcatttacctacggttcagttt
gatttcacagggattggtgacttagagaataagcctaaagactcacttgtagacataatt
gggatctgcaagagctatgaagatgctactaaaatcacagtaaagtcaaccaacagagaa
gtttctaaaagaaatatctatttaatggacatgtcagggaaagtggtgaatgctactctg
tggggagaagatgctgacaagtttgatggttctagacagcccgtgatggccattaaagga
gccagagtttccgattttggtggacggagcctttccatattgtcttcaagtactatcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgatctgaagagtggaggagtaggaggaagcaacacc
aattggaaaaccttgtatgaggttaaatcagagaatctgggccaaggtgacaaggcagac
tattttagctctgtggcaacagtggtgtatcttcgcaaagagaactgtatgtaccaggct
tgcccaactcaggactgcaataagaaagtgattgaccaacagaatggattgtaccgctgt
gaaaagtgcgacagtgaatttgccaattttaaataccgcatgatcttgtcggcaaatatt
gcggattttcaagaaaatcagtgggtgacttgtttccaggagtctgctgaagctatcctc
ggacaaaacgctgcttatcttggggaattaaaagagaagaatgagcaggcatttgaagaa
gttttccagaacgccaactttcgatctttcacattcaaaatcagggtcaaactggagacc
tacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gactacggcaaaagactgatcatgaacatcaggagaaacgcggcgatgtaa
DBGET
integrated database retrieval system
