Marmota marmota marmota (Alpine marmot): 107155226
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Entry
107155226 CDS
T09644
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04082
Neuroactive ligand signaling
mmma04721
Synaptic vesicle cycle
mmma04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107155226 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
107155226 (Slc6a4)
04721 Synaptic vesicle cycle
107155226 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107155226 (Slc6a4)
Transporters [BR:
mmma02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107155226 (Slc6a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
107155226
NCBI-ProteinID:
XP_015356528
Ensembl:
ENSMMMG00000002724
UniProt:
A0A8C5YRX7
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKVLSACKDGEDCQKNGVLQKGVPTTEERAESGQRSNGYSAVPSPSAGDDTP
HSMPAATTTLMAEVHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYTASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSLVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLAVVVTCFIGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPVFLLFIICSFLMSPPQLRLFQYNYPHWSVILGYCIGTSSFICIPTYITYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttgaattctcagaaggtgctgtcagcctgtaaggatggagaggat
tgtcagaaaaatggagtgttgcagaagggtgtccccaccacagaggaaagagctgagtct
ggccaaaggtccaatgggtactctgcagttccgagccctagcgcaggagatgatactcct
cactctatgccagctgccaccaccaccctaatggcagaggttcatcagggggaacgggag
acctggggcaagaagatggatttcctcctctcagtcattggttatgctgtggacctgggc
aatgtctggcgttttccctacatatgctaccagaatggaggaggggcgttccttctcccc
tacaccatcatggccattttcgggggaattccactcttttacatggagcttgcactgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccaattttcaaaggg
atcggctatgccatctgcatcattgccttttacactgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcacggatcagctgccctggaccagctgc
aagaattcctggaacactggcaactgcaccaactatttctcagaggacaatatcacctgg
acactccattccacatcccctgctgaagaattttacacgcgccatgtcttgcagatccac
cggtctaagggactccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctcatcttcaccattatctacttcagcatctggaaaggtgtcaaaacttctggcaaggtg
gtatgggtgacagctaccttcccttacatcatcctttctatcctgctggtgaggggggcc
accctccctggagcctggaggggtgtcctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtggatcgatgctgctgctcaaatctttttctctcttggtccaggc
ttcggagtcctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagtttggtcaactgcatgaccagctttgtttcgggatttgttatcttc
actgtgctcgggtacatggctgagatgaggaatgaagatgtatcagaggtggccaaagat
gcaggacccagcctcctcttcatcacatatgcagaagccatagccaacatgcctgcatcc
acattttttgccatcatcttcttcctcatgctgatcacactgggcctggacagcacattt
gcaggcttggagggtgtgatcacggctgtgctagatgagtttccacacatctgggccaag
cgccgggagtggtttgtgcttgctgtggtggttacttgcttcattggatccctggtcacc
ctgacttttggaggggcctatgtggtgaagctgctggaagaatatgccacgggtcccgcg
gtgctcaccgtcgtgcttatagaagcagtggctgtgtcttggttctatgggatcactcag
ttttgcagtgatgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgc
tgggtagccatcagccctgtgtttctcctgttcatcatttgcagttttttgatgagccca
ccccagctacgacttttccaatataattatcctcactggagtgtcatcctgggttactgc
ataggaacttcatctttcatctgcatcccgacgtatataacttatcggctgatcatcact
ccagggacttttaaggagcgcattattaaaagtatcactccagaaacaccaacagaaatt
ccctgcggggacatccgcttgaatgctgtgtaa
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