Marmota marmota marmota (Alpine marmot): 107155256
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Entry
107155256 CDS
T09644
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107155256 (Supt6h)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107155256 (Supt6h)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107155256 (Supt6h)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107155256 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
107155256
NCBI-ProteinID:
XP_048650009
Ensembl:
ENSMMMG00000011980
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDDGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPRMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
EDGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLSEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELLDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLVDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQNCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQPQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggctgaggagtcagaggaagaatacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaagaggaggatgatgatgaggaggag
gaggaggagaatctagatgatcaagatgaacaaggcaatttaaaaggctttatcaatgat
gatgatgatgaagatgatggggaggaagatgaaggcagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtgaaacgaggacaaaagtaccggcgt
gtcaaaaaaatgtcagatgatgaagatgatgatgaagaggaatatggcaaggaggaacat
gaaaaagaggctattgcagaagaaatattccaagatggggaaggggaagaaggacaggaa
gccgtggaggcccccatggctcctccagaggaggaagaggaagatgatgaagagtcagat
attgatgatttcatcgtggatgacgatggacagcctctgaaaaaacccaagtggcggaaa
aagcttcccggatacacagatgcagcactgcaagaagcccaggagatttttggcgtggat
tttgattatgacgagtttgagaaatacaatgagtatgatgaagaactggaggaagagtat
gagtatgaggatgatgaggccgaaggtgaaatcagagtgcgccccaagaagaccaccaag
aagcgtgtgagccgcaggagcatctttgagatgtacgagcccagtgagctggaaagcagc
cacctcacagatcaagacaatgaaatccgagccactgacttgcctgagaggttccagctc
cgctccatcccagtcaagggggccgaagatgatgaattagaagaagaagctgactggatc
tacaggaatgcctttgccacgccaaccatttctctacaggaaagctgtgattacctggac
cgagggcagccaacaagcagcttcagtcgaaaaggacccagtacaattcagaaaattaaa
gaagccctgggcttcatgcgaaatcagcattttgaggtaccttttattgccttctaccga
aaagagtatgtggaacctgagttgcatatcaatgacctatggagagtatggcagtgggat
gaaaagtggacccagttgaggatccgcaaagaaaacttaacaagactgtttgagaagatg
caagcttatcaatatgagcaaatctctgctgatcctgacaaacctcttgctgatggcatc
cgggctctggacaccactgacatggagagactcaaggacgtacaatcaatggatgagtta
aaagatgtctataaccatttcctgctttactatggccgtgatatccccaggatgcagaat
gctgccaaagctagccgcaagaagctaaagcgtgtaagggaggagggagatgaagaaggt
gaaggtgaagaagcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtataccatttgccagagcgcagggctagatggcctggccaaaaagtttggg
cttactcctgagcaatttggggagaacctccgggatagctaccagcggcatgagacagaa
caattcccggcagagcctttggagctggccaaggattatgtttgcagccagtttcctact
ccagaagctgtgctggaaggtgcccgctacatggtagcactacagattgcacgtgagccc
cttgtccgccaggtgctgaggcaaactttccaggagagagccaagttaaatataacccct
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattcctttaagtactta
aagaacaagcctgttaaagaactgagagatgaccagttcctcaagataggcctggcagaa
gaagatggactactcaccattgacatcagcatagatatgaagggagttgaaggctatggc
aatgaccagacatactttgaagagatcaaacaattttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcaacgcaccatggccattgaacgagcattacagcagttc
ctctatgtgcagatggccaaagagctcaagaataagttgttgtctgaggccaaggaatat
gtcataaaggcctgtagccggaagctctataactggttgagggtggcgccctaccgacca
gatcagcaggtagaggaagatgatgacttcatggatgagaatcaagggaaaggcattaga
gtcctaggcattgctttctcctctgccagagatcatcctgtgttctgtgctctggtcaat
ggtgaaggagaagtgacagacttcctccggctgccccattttaccaaacggcgaactgcc
tggagagaagaagagcgggaaaagaaggctcaagacattgaaaccctaaagaaatttctt
ctgaacaagaagcctcatgtggtgacagttgcaggagagaacagggatgcccaaatgttg
attgaggatgtgaagcgcatcgtgcatgagctggaccagggccaacagctgtcttccatt
ggggtggagctgcttgacaacgaattggctattctctatatgaacagcaagaagtcagag
gcagagttccgggattatcctcctgtactgagacaggcagtctctctggctcggcgcatc
caagaccctctgatagaatttgctcaagtgtgcagctctgatgaagacatcctatgtctc
aaatttcaccccttgcaggaacatgttgtgaaagaggagctgctgaatgccttgtactgt
gaatttatcaaccgggtcaatgaagttggggttgatgtcaaccgtgccattgctcatcct
tacagccaggccttgatccagtatgtctgtggcctgggacctcgaaaagggacccacctc
ctgaagattctgaagcagaacaacacacgccttgaaagccgcacccagttggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacagcc
tccctgggggacagcactgactcatacattgaagtccttgatggttctcgtgtccaccct
gagacctatgagtgggctaggaagatggccgtggatgccctggaatatgatgaatcagct
gaggatgccaatcctgcaggagcccttgaagaaatcttggaaaacccagagcgactcaag
gacttggaccttgatgcctttgcagaagaactggagaggcagggctatggcgacaaacac
atcacattatatgacatccgggcagagctgagctgtcggtacaaggacctccgaacagcc
taccgctctcccaacaccgaagaaatctttaatatgttaaccaaagaaactccagagact
ttctacattggaaagctcattatctgcaacgtcactggcattgctcacaggcgtccacag
ggtgaaagctatgaccaggcaatccgcaatgatgagacggggctgtggcagtgccccttc
tgtcagcaagacaatttccctgaactaagtgaggtctggaaccattttgacagcgggtca
tgcccgggccaggccattggtgtcaaaacccggctagacaatggtgtcactggctttatc
cccaccaaatttcttagtgacaaagtggtaaagcggccagaggagcgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacattgagaagtttagtgcagacttgacc
tgccgtacctcggaccttgtggacaggaacaatgaatggaaactgcccaaggacacttac
tatgactttgatgctgaagcagcagaccacaagcaggaggaagacatgaaacggaagcag
caacggaccacatacatcaagcgagtgattgcacacccatccttccataatatcaatttc
aaacaagcagaaaagatgatggaaaccatggatcagggtgacgtgatcatccgaccaagc
agcaagggtgagaaccatctgacagtgacctggaaagtcagtgacggcatctaccagcat
gtggatgtgcgggaggagggcaaggaaaatgccttcagccttggagctactctttggatc
aatagtgaggaatttgaagacttggatgagattgttgcccgctatgtccaacccatggcc
tcctttgcccgggacctccttaaccacaagtattatcagaattgcagtggtggggaccgc
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacggtgactcctgaaggattccggtaccgaggccaaatt
ttcccaactgtaaatgggctcttcagatggtttaaggatcattaccaggatcctgtgcca
ggcattacccccagtagcagcagcagaacaaggacacctgcctctatcaatgctactcct
gccaacatcaaccttgcagatctgacacgggctgtgaatgccctaccccagaacatgact
tcgcagatgttcagtgccattgctgctgtcacaggccagggacagaaccctaatgccacc
ccagcccagtgggcctccagccagtatggctatggaggcagtggagggggcagcagcgct
taccatgtattcccaacaccagctcaacagccagtggccacaccactaatgacccccagc
tactcctacacaaccccgagccagcccatcaccacaccgcaataccaccagctccaggcc
agcaccaccccacagtctgcccagccccagccccagccctcttccagctccaggcaacgg
cagcaacagccaaagtccaacagccatgcagctatcgactgggggaagatggcagaacaa
tggctacaggagaaggaggcagaacggcggaaacagaagcagcggttgacacctcggccc
tccccaagtcccatgatcgaaagcacccccatgtccattgctggcgatgccaccccgctc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
