Marmota marmota marmota (Alpine marmot): 107155573
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Entry
107155573 CDS
T09644
Symbol
Prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X2
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma00310
Lysine degradation
mmma01100
Metabolic pathways
mmma04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107155573 (Prdm16)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
107155573 (Prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107155573 (Prdm16)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107155573 (Prdm16)
Enzymes [BR:
mmma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
107155573 (Prdm16)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107155573 (Prdm16)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107155573 (Prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
zf-BED
zf-C2H2_15
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
107155573
NCBI-ProteinID:
XP_015356974
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MYEPDPDLLAGQSAEEETEDSILSPIPMGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPI
PPDFELRESSIPGAGLGIWAKRKMEVGERLGSCVAAPRAALKEADFGWEQMLADPEVPSQ
EGCIRKISEDLGSEKFCVDASQVGAGSWLKYVRVACSCDDQNLSMCQINEQIYYKVIKDI
EPGEELLVHVKESAYSLGAVPPSLDEEPTFRCDECDELFPCKVDLRRHKKYACGSAGTAV
YQGLGEGLKPEGLGGGGSDPSHECKDCERMFPTKYSLEQHMIVHTEEREYKCDQCPKAFN
WKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSS
GLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLN
KHRRFCEGKSHYTPGGLFAPGLPLTPSPLMDKAKPSPNLNHTGLGFNEYFPSRPHPGSLP
FSTGPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHTQDAKLPSPLGNPALPLI
SAVSNSGQGAMAATGPEEKLESRLEDTYVEKLKTRSPDMSDGSDFEDINTTTGTDLDTTT
GTGSDLDSDVDSDRDKGKDKGKPKFGGGSVPPGSTHSGAEVPVFYSQHSFFPPPEEQLLT
ASGAAGDSIKAIASIAEKYFGPGFMGMQEKKLGALPYHSVFPFQFLPDFPHSLYPFTDRA
LAHNLLVKAEPKSPRDTLKVGGPSAECPFDLTTKPKEAKPILPAPKVPPAPASSEEQPLD
LSIGSRARASQNGAGREPRKNHIYGERKPGAGEGLPKVCPAQLPQQPSLHYAKPSPFFMD
PIYSRVEKRKVTDPVGVLKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGGSLQP
LPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYC
DRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHEGAPVSQHAGVL
TNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMSQASSRTDKRPEIQELGSS
PQCPGLASEKPEDVEEEEEEELEEEDEDSLAGKSQDDTVSPTPEPQGVYEDEEDEEPPAS
LAVGFDHTRRCHEEPEGGLSALEPTPAFGKGLDLHRAAEEAFEVKDVLNSTLDSEALKQT
LYRQAKNQAYAMMLSLSEDAPLHAPSQSSLDAWLNIAGATSESGAFNPINHL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagcccgatccggacctgctggctggccagagtgctgaggaggagaccgaggac
agcatcctgtctcccatccccatggggccaccgtcccccttccccaccagtgaggacttc
acccccaaggagggctcgccctacgaggctcccgtctacattcccgaagacattccgatc
ccgccagacttcgagctgcgagagtcctccatcccgggggccggcctggggatctgggcc
aagaggaagatggaggtcggggagaggctcggctcctgcgtggcggcgccccgggcggcg
ctgaaggaggccgactttggatgggagcaaatgctcgcggatcccgaggtgccgtcccag
gaaggctgcatccgaaagatctctgaagacctgggcagcgagaagttctgcgtggatgcc
agccaggtgggggctggcagctggctcaagtacgtccgtgtggcatgctcctgtgatgac
cagaacctctccatgtgtcagatcaacgagcagatttattataaagtcattaaggacatt
gagccgggtgaggagctgttggtacacgtgaaggaaagtgcctactcccttggcgcggtg
ccacccagcctggatgaggagcccacgttccgctgtgacgagtgtgacgagctcttcccg
tgcaaggtggacctgcggcgccacaagaaatacgcctgcggctctgcggggactgccgtc
taccagggcctgggggaggggctcaagcccgagggcctcggtggcgggggcagcgacccc
tcccacgagtgcaaggactgcgagcggatgttccccaccaagtacagcttggagcagcac
atgatcgtccacacagaggagcgggaatacaagtgtgaccagtgtcccaaggccttcaac
tggaagtccaacctcatccgccaccagatgtcccatgacagtggcaagcgctttgaatgt
gaaaactgcgtgaaggtgttcacggaccccagcaacctgcagcggcacatccgctcgcag
cacgtgggcgcccgggcccacgcctgccccgactgcggcaagaccttcgccacgtcctct
ggcctcaagcagcacaagcacatccacagcaccgtcaagcccttcatatgtgaggtctgc
cacaagtcctacacgcagttctccaacctgtgccggcacaagcgcatgcacgcggactgc
cgcacgcagatcaagtgcaaggactgtgggcagatgttcagcactacctcctccctgaac
aagcaccggcgcttctgcgagggcaagagccattacacgccgggcggcctcttcgcccca
ggcctgcccttgacccccagccccctgatggacaaggcaaagccctcccccaacctcaac
cacactggcctgggcttcaacgagtacttcccctccaggccccaccctgggagcctgccc
ttctccacgggccccccggccttccctgcactcacgccgggcttcccgggcatcttccct
ccgtccttgtacccccggccgcctctgctacctcccacaccgttgctcaagagccccctg
aaccacacacaggacgccaagctccccagccccttggggaacccagcactgcccctcatc
tccgcggtcagcaacagcggccagggcgccatggcggccacagggcccgaggagaagttg
gagagccgcctggaggacacgtacgtggagaagctcaagaccaggagccccgacatgtcc
gatggcagcgactttgaggacatcaacaccaccacggggactgacctggacaccacgacg
gggactggctcggacctggacagcgacgtggacagcgaccgagacaagggcaaggacaag
ggcaagcccaagtttggcggcggctcggtgcccccggggtccacccacagtggggccgag
gtgcccgtcttctactcacagcactccttcttcccaccgcccgaggagcagctgctgacc
gcctcgggcgccgccggcgactccatcaaagccatcgcgtccatcgcggagaagtacttt
ggcccgggcttcatgggcatgcaggagaagaagctgggcgcgctgccctaccactcggtg
ttccccttccagttcctgcccgacttcccccactccctataccccttcacggaccgcgcc
ctcgcccacaacctgctggtcaaggccgagccaaagtcgccccgggacacactcaaggtg
ggcggccccagtgccgagtgcccctttgacctcaccaccaaaccaaaagaggcgaagccc
atcctgcccgcgcccaaggtgcccccggcacccgcgtccagcgaggagcagccactggac
ttgagcatcggcagccgggcccgcgccagccagaacggagcgggccgggagccccggaag
aaccacatctacggggagcggaagccaggggccggcgaggggctgcccaaggtgtgccca
gcgcaactgccccagcagccctccctgcactacgccaagccctctcccttcttcatggac
cccatttacagcagggtagaaaagcggaaggtgacggaccccgtgggtgtcctgaaggag
aagtacctgaggccgtccccgctgctgtttcacccccagatgtcagccatcgagaccatg
accgagaagctggagagcttcgcagccatgaaagcagactcggggggctcgctgcagccc
ctgccccaccaccccttcaacttccggtccccacccccgacgctctcggaccccatcctc
aggaagggcaaggagcggtacacgtgcaggtactgtggcaagatcttcccccggtcagca
aatctcacgagacacctgaggacgcacaccggggagcagccgtacaggtgcaagtactgc
gaccgctccttcagcatctcctccaacctccagcggcacgtgcggaacatccacaacaag
gagaagcccttcaagtgccacctgtgcaaccggtgcttcgggcagcagaccaacctggac
aggcacctcaagaagcacgagcatgagggcgcgccagtgagccagcacgcgggggtcctc
acaaaccacctgggcaccagtgcctcttccccgacctccgagtcggacaaccacgcactt
ttagacgagaaagaggactcctacttctctgaaatcaggaacttcatcgccaacagcgag
atgagccaggcatcctcgagaacagacaagcggccagagatccaggagctgggcagcagc
ccccagtgtccaggcttagccagcgagaagccagaggatgtggaggaggaagaagaggag
gagctggaagaggaggacgaggacagcctggccgggaagtcgcaggacgacacggtgtcc
cccacgcccgagccccagggagtctacgaggatgaggaggacgaggagccacccgcctcc
ctggccgtgggctttgaccacacccgaaggtgtcatgaggagccagagggcggcctgtca
gctttggagccgacgccggcctttgggaaggggctggatctccacagagcagctgaggaa
gcatttgaagttaaagatgtgcttaattccaccttagattctgaggctttaaaacagacc
ctgtacaggcaggctaagaaccaggcatatgcaatgatgctgtctctttccgaggatgct
cctctccacgccccctcccagagctcgctggacgcttggttgaacatcgcaggagccacg
tcggagtctggagcctttaaccccatcaaccacctctga
DBGET
integrated database retrieval system
