Marmota marmota marmota (Alpine marmot): 107155878
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Entry
107155878 CDS
T09644
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04120
Ubiquitin mediated proteolysis
mmma04137
Mitophagy - animal
mmma04144
Endocytosis
mmma04340
Hedgehog signaling pathway
mmma04350
TGF-beta signaling pathway
mmma04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107155878
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107155878
04350 TGF-beta signaling pathway
107155878
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107155878
04137 Mitophagy - animal
107155878
09144 Cellular community - eukaryotes
04520 Adherens junction
107155878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107155878
04121 Ubiquitin system [BR:
mmma04121
]
107155878
03029 Mitochondrial biogenesis [BR:
mmma03029
]
107155878
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107155878
Membrane trafficking [BR:
mmma04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107155878
Autophagy
Mitophagy
Other mitophagy associated proteins
107155878
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
HECT type E3
107155878
Mitochondrial biogenesis [BR:
mmma03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107155878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
107155878
NCBI-ProteinID:
XP_015357391
Ensembl:
ENSMMMG00000005602
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEEPAPYSDGTGAAAGGGNCRFAESPSQDQRLQAQRLRNPEVRGSLQTPQNRPHGHQSPE
LPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGR
IYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQPPPLPSEGSVEDEELPAQRYERDLVQK
LKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYG
GVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVF
HGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNA
FGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLK
PFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFV
TGSTRVPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKL
LTAVEETCGFAVE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccggccccttactcggatggtactggtgctgccgcaggtggagggaactgc
aggtttgcagagtccccaagtcaagatcaaaggcttcaggcacaacgacttagaaatcca
gaagtccgaggttcactacagacgccccagaaccgtccacatggccaccagtcaccagaa
ctgcctgaaggctatgaacagagaacgacagtacaaggacaagtttactttttgcacaca
cagactggagttagcacatggcatgaccctcggatacccagagaccttaacagtgtgaat
tgtgatgaactcggaccactgccaccaggttgggaagtcagaagtacagtttctgggagg
atatattttgtagatcataataaccgaacaacccagtttacagatccaaggttacaccac
atcatgaatcaccagtgccaactaaaggagcccagccagccaccgccgctgcccagtgaa
ggctctgtggaggatgaggagcttcctgcccagagatacgaaagagacctagtccagaaa
ctcaaagtcctcagacacgagctgtcactgcagcaaccccaggctggccattgtcgcatt
gaagtttctagagaagaaatatttgaggagtcctatcgtcaaatcatgaagatgcgcccc
aaggacctgaagaagcgactcatggtgaagttccgtggggaggagggcttggactacggt
ggagtggcgcgggagtggctttatttgttgtgccatgaaatgttgaatccatattatgga
ctcttccagtattccacggacaatatttacatgttgcaaatcaacccagattcttcaatc
aaccctgaccatctgtcttatttccactttgtgggtcggatcatgggtctggctgtgttc
catggacactacataaatgggggtttcacagttcccttctacaagcagcttctggggaaa
cccatccaactctctgacctggagtcggtggacccagaactgcacaagagcttggtgtgg
attctagagaacgacatcacccccgtgctggaccacaccttctgcgtggagcataacgct
ttcgggcggattcttcagcacgaattgaaacccaacggcagaaacgtgccggtcacggag
gagaacaagaaggaatatgtccggttgtacgtgaactggaggttcatgagagggatcgag
gcccagttcttggcgctccagaagggctttaatgaactcatccctcagcacttactcaag
ccctttgaccagaaggaactagagttgataataggaggcctggataagatcgacctgaat
gactggaagtccaacacgcggctgaagcactgtgtggccgacagcaacatcgtccgctgg
ttctggcaggcagtggagaccttcgatgaggagaggagggccaggctgctgcagttcgtg
actggctccacgcgagtccctctccagggcttcaaggctctgcaaggcgcggcagggccc
cggctgttcaccatccacctgatcgatgcaaacacggacaacttgcccaaggcccacact
tgctttaaccgaatcgatatcccaccgtatgagtcttatgaaaaactctacgagaaactg
ctgaccgcggtggaggagacctgtgggtttgctgtggagtga
DBGET
integrated database retrieval system
