Marmota marmota marmota (Alpine marmot): 107155965
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Entry
107155965 CDS
T09644
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmma01002
]
107155965 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107155965 (Usp42)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107155965 (Usp42)
Peptidases and inhibitors [BR:
mmma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107155965 (Usp42)
Ubiquitin system [BR:
mmma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107155965 (Usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107155965
NCBI-ProteinID:
XP_015357484
Ensembl:
ENSMMMG00000006895
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MTIVDKAESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGAV
VYSNSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGEL
THSTHSPGQSSPRPVISQRVVTNKQATTPGFIGPQLPSHLIKNPPHLNGTGPLKETPSSS
MSSPNGNPSVNRAGPVNASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQPN
LHSNSLEAPNKPVPSSTITNSSAIQSTSNASTMSISNKVAKPISPSESCSKPVMNGKSKL
SSSVLVPYGAESSEESDEETKGLAKENGVGTVTSSHSAGEEAEDDEASQHELQEPITLNG
ANGADGNPKENGLSFEGASCQVQPTIHSENPFSKANGLPGKLMPVPLPSLPEDKILETFK
LSNKVKGSIDETSLTGTEISPAEEPATEPEVGSTTAGSHEKVETVTSLSSKLKKALPPSD
PNTKSTKEEVSENISAKPEESLPIINNVCHTNKNPMGDDQLSNLCDTENLTNDQSKPSQE
VKGMLIESPRDSAPVEIVEKLSPTPSVRSEDECEHKLLVYLSRDRCRDVEDPSRSTGVSA
DALTSPQPDSRTTGAHSDGGDEHSSGERCDENKVGQKVQDHSPVKEKIGSLRKVDRGHYR
NRRDRSSSGEHARESRSKTEDHYHKKRRYVRERAKQERHQVEHCKGSQHPLCHSERVSPS
ERRSLGRYSYHHSRNRGGSDQDWARHHHSESEHTWGREKYYPEKMRWDKCRYYHDRYVPY
AARETREWRPLHSSGREHDRARLHKDCYRGRKGWEPPARGKERHHLHSVRVGAAPALPLH
PARYPQEKTALGAEDSSFSLSDRFHEHETVKSRKWRYEIIENNDSHLEKKAHRSLQKDPL
EEPKVKKHKKSKKKKKSKDKHRERDCRHQQDSDLSVAYSDADLHRHKKKKKKKKRHSRKS
EDFVKDSGLHLMKAMSYETVNHFRRTEGSFLLTDGLPLEGIGPFQEKTKHLRMESRADRC
HLSEYGQGD
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagctgaatcttcagacccatcaacctatcagaatcagcctggc
agttctgaggcagtctcacctggagacatggatgcaggttctgccagctggggtgctgtg
tcttcattaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgctgta
gtttattcaaattcttctgtacctgataaatcaaagccatcaccacaaaaggatcaagcc
ctaggtgatggcattgctcctccacaaaaagttctttttccatctgagaagatttgtctt
aagtggcaacaaactcacagagttggcgctgggctccagaatttgggcaatacctgtttt
gccaatgctgctttgcagtgtttaacttacacaccacctctcgccaattacatgttgtca
catgaacactccaagacatgtcatgcagaaggattttgcatgatgtgtacaatgcaagcg
catattacccaggcactcagcaatcctggggatgtaattaaaccaatgtttgtcatcaat
gagatgcggcgtatagctaggcactttcgttttggaaaccaagaagatgcccatgaattt
cttcagtatactgttgatgctatgcaaaaagcatgtttgaatgggagcaataaattagac
agacatacccaggctaccacacttgtttgtcagatatttggaggatacctaagatctaga
gtcaagtgtttaaattgcaagggcgtttcagatacctttgatccatatcttgacataaca
ttggagataaaggctgctcaaagtgttaataaggcattggagcagtttgtgaaaccagaa
cagctggatggtgaaaactcctacaagtgcagcaagtgtaaaaagatggttccagcttca
aagaggttcactatacatagatcttctaatgttcttacactttctctgaaacgctttgca
aattttactggtggaaaaattgctaaggatgtgaaatatcctgaatatcttgatattcgt
ccatacatgtctcaaccaaatggagaaccaattatttatgttctgtatgcagtgctggtg
cacactggttttaattgccacgctggccattacttctgttacataaaagctagtaatggc
ctctggtatcaaatgaatgattccattgtatctaccagtgatattagatcggtactcagc
caacaagcttatgtgctcttttatatcaggtcccatgatgtgaaaaatggaggtgaactt
actcattccacccatagcccaggccagtcctctccccgcccagtaattagtcagcgggtt
gttaccaacaagcaggccacgacgccagggtttattggaccacagcttccttctcacctg
ataaagaatccacctcacttgaatggaactgggccattgaaggaaacaccaagcagttcc
atgtcaagtcctaatggaaatcccagtgtcaacagggctggtcctgttaatgcttccact
tctgttcaaaactggtcagttaacaggccctcagttattccagaacatcccaagaaacaa
aaaattaccataagtattcacaacaagttgcctgttcgccaaggtcagtctcagcctaat
cttcacagcaattctttggaggctcctaacaagcctgttccctcttctaccattactaat
tcttctgcaatacagtctacctcgaatgcatctacgatgtcaatttctaataaagtagca
aaacccatctctccgagtgaatcctgctccaagccagtgatgaatggcaagtctaagctg
agctccagtgtgctggtcccctatggtgccgagtcatccgaagagtctgacgaggaaaca
aagggcctggccaaggagaatggtgtgggtacagtgacgagctctcactctgctggtgaa
gaagccgaagatgatgaggcttctcagcatgagcttcaagaacctatcactttaaatggt
gctaatggtgcagatggcaacccaaaagaaaatggcctatcatttgaaggtgccagctgc
caagtccagcctactatacactcagaaaatcccttttctaaagcaaatggtcttcctgga
aagttgatgcctgttcctttgccatctctcccagaagacaaaatcttagagactttcaaa
cttagcaacaaagtaaaaggctcaatagatgaaacaagtttgactggaacagagataagt
ccagctgaggagcctgctacagagccggaagttggcagtaccactgctggttctcacgaa
aaagtggagacagtcacaagtctgagcagcaagttaaagaaggctttgccaccctctgac
cccaacaccaaatctaccaaagaagaagtctctgaaaacatttcagcaaaacctgaagag
tccttgcctattattaacaatgtttgtcacaccaacaagaatcccatgggggatgatcaa
ctttctaacctgtgtgacactgagaatcttacaaatgaccagagcaaaccatcccaagag
gtgaaaggaatgttaattgagagtccacgggactctgcaccagtggaaatagtggagaag
ttgagcccaactccctcagtacgttcagaagatgaatgtgagcataaactcctagtttac
ctcagcagagacagatgcagggatgtagaagatccttccagaagcacaggcgtgtctgca
gatgcattgacctctccccagccagacagcaggaccacaggagcccactcagatgggggc
gacgagcatagcagtggcgagagatgtgatgaaaacaaggttggacagaaagttcaggat
cattctccggttaaggaaaaaatcggtagcctcagaaaagttgatcgaggacattatcgg
aaccgtagagatcgttcctccagtggagaacatgcaagggaaagtaggagcaagacagag
gaccattatcacaaaaagcggcgctatgttagagagcgggccaagcaggagcgccaccaa
gtggagcactgtaaggggagtcagcaccccctgtgccacagcgagcgggtcagccccagc
gagcgccgctccctgggcaggtacagctatcaccactctcgcaacagaggtgggtcagac
caggactgggccagacaccaccactcagagagcgagcacacctggggccgggagaagtac
taccctgagaagatgaggtgggacaagtgcaggtattaccatgacaggtacgtcccctac
gcagccagggagacgagggaatggaggcctctacacagcagtggcagggagcatgaccga
gcacggctgcacaaggactgctacaggggcaggaagggctgggagcctcctgccaggggc
aaggagcggcaccacttgcacagtgtgcgagtgggggcagcccctgcccttcctctgcac
cctgcgaggtacccccaggagaagactgcactgggagctgaagacagcagtttcagcctc
tcggatcggtttcatgaacatgaaactgtaaagtcgcggaaatggaggtacgagatcata
gaaaataatgacagtcacttagaaaagaaagcccacagaagcttacagaaggacccttta
gaagagcctaaggtgaagaagcacaagaaatcaaagaagaaaaagaaatccaaagacaaa
catcgagagcgcgactgcaggcatcagcaagattccgatctttcagtagcgtactctgat
gccgacctccacagacacaaaaagaagaagaagaaaaagaagagacattcaaggaagtca
gaggactttgtgaaagattcaggattacacttgatgaaggccatgagctatgagactgtc
aaccatttccggagaacagagggcagttttctactcaccgatggcctgcctctggaaggc
attggacctttccaggaaaaaacaaagcatttaaggatggaaagcagggctgacaggtgc
catctgtctgagtatggccagggtgattga
DBGET
integrated database retrieval system
