KEGG   Marmota marmota marmota (Alpine marmot): 107156219
Entry
107156219         CDS       T09644                                 
Name
(RefSeq) nuclear RNA export factor 2-like
  KO
K14284  nuclear RNA export factor
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03008  Ribosome biogenesis in eukaryotes
mmma03013  Nucleocytoplasmic transport
mmma03015  mRNA surveillance pathway
mmma05014  Amyotrophic lateral sclerosis
mmma05164  Influenza A
mmma05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107156219
   03015 mRNA surveillance pathway
    107156219
   03008 Ribosome biogenesis in eukaryotes
    107156219
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    107156219
   05168 Herpes simplex virus 1 infection
    107156219
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    107156219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107156219
   03009 Ribosome biogenesis [BR:mmma03009]
    107156219
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107156219
   mRNA cycle factors
    Stress granule specific factors
     107156219
Ribosome biogenesis [BR:mmma03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    107156219
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4
Other DBs
NCBI-GeneID: 107156219
NCBI-ProteinID: XP_048653281
LinkDB
Position
Unknown
AA seq 646 aa
MRPSSDKRQAVSISKVILQNTKSERDPQQKCDQPLEKCGTNRNEVSENSDDNSAVQVKKK
GGKISQDNLGRKNLHYEHTGYELLPSKLQEGDRNVAISTQTTHRNKKREKWHNEEQIHIT
VWKDTKPEEREIGEDTQGEAMGNWFKVTIPYGRKYDKAWLMNTVQSHCTVPFTPVDFHYI
RNQARFFVQDVKTASALKDISYKICDEENRKISVFVNTSAIPYSMQNKFTPEQMEQLKLT
MSKQYDASQQVLNLQKLRFDSDLVGHDIDMILNRRNCMFATLQIIESNFPELLSLNLQNN
KLYQLDGLSDIIEKAPKVKILNLSKNELRTAKELDKPKGLKLEELWLEGNPLCSTFPDQS
AYVSAIQDCFPNLLRLDGQELSTPVVVDPDAPKLIKPCKESYKGSETLKNLVLQFLQEYY
LIYDYGDRQGLLSAYHDEACFSLTIPFNPKDPAPNSLCKYFKYSRNMKKLKDSNMRRQLL
KHTKHDIVDYLSVLPKTEHDFSCLMIDMWFQTETMLCFSVNGVFKEAEGKSQGCVHAFTW
TFIAIPTNNSSICILNDELIVRNASPDEIQSSFSIPMPALFSTSMPTLSQEQQEMVKVFS
TQSGMKLEWSQKCLEDNEWNYTRAGQVFIMLQTEGKIPEEAFKQLP
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcggccctcttcagataagcgccaggcagtcagtatttccaaggttattctgcaaaac
actaagtctgagagagacccacaacaaaaatgtgatcaaccattagagaaatgtgggaca
aacagaaatgaagtttcagaaaacagtgatgataacagtgctgttcaagtaaaaaagaaa
ggtggaaaaatttcccaggataatcttggcaggaagaatcttcattatgagcatactggt
tatgaactgcttccttcgaaactccaggagggagatcgaaatgtggcaataagcactcaa
accacccaccgcaataagaagagagagaaatggcataatgaagagcaaatccatattact
gtgtggaaagatacaaaacctgaagagagagaaataggagaggacacacaaggagaagca
atgggcaactggttcaaggttacgattccatatgggagaaagtatgacaaggcatggcta
atgaatacagtccagagccattgcactgtccccttcaccccggtcgatttccactacatc
agaaatcaggcccggttctttgtacaggatgttaaaactgcttctgcattaaaggatatc
agctacaagatttgtgatgaggagaaccgaaagatatctgtctttgtcaatacttctgct
ataccctactctatgcagaataagttcacgccagaacaaatggagcagctaaagctgact
atgagcaaacaatatgatgcctcccagcaagttctcaacctccaaaagctccgttttgac
tcagacttggtgggccatgacattgacatgatcctgaatcgaagaaactgcatgtttgcc
accttgcagatcattgaaagtaatttccctgagctgttgtccttgaacttgcaaaacaac
aaactgtaccagctggatggcctgtctgacattatagagaaggctcccaaagtcaagata
ctaaacctttccaaaaatgagctgaggaccgccaaggagttggacaagccgaaagggctg
aagctggaagagctgtggctagaagggaaccccttgtgcagtactttcccagaccagtct
gcctatgtaagtgctatccaggattgtttccccaatttattacgcctggatggccaggag
ttatccacaccagttgttgttgaccctgatgcccccaaattaataaaaccctgcaaggaa
agctataaaggatctgagaccttaaagaatctagttctgcaattcctacaggagtattac
ctgatctatgactatggagatcgacagggtctacttagtgcttaccatgatgaggcctgc
ttctctctgaccattcccttcaaccccaaggacccagccccaaatagcttgtgcaagtac
ttcaagtatagtaggaatatgaagaagctcaaggattccaacatgcggagacaactgctg
aaacacacaaaacatgacatcgtggactacctcagtgtgttgcccaaaactgagcatgac
ttcagttgccttatgatagatatgtggttccagacggaaacaatgctctgcttctctgtg
aatggggtgttcaaggaagcagaaggaaagtctcaaggatgtgttcatgccttcacctgg
accttcattgctatccctaccaacaattccagtatatgcatcctgaatgatgagttgatt
gtgaggaatgccagccctgatgagatccagagctctttctccatcccaatgcctgcactg
ttttccacctccatgcctaccctctcccaggagcagcaggaaatggtgaaggttttctct
acacagtctgggatgaaacttgaatggtctcaaaagtgccttgaagacaacgagtggaac
tacaccagagctggtcaggtcttcattatgcttcagactgagggcaagatcccagaagag
gccttcaaacagttaccctga

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