Marmota marmota marmota (Alpine marmot): 107156267
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Entry
107156267 CDS
T09644
Symbol
Pcdh19
Name
(RefSeq) protocadherin-19 isoform X2
KO
K16499
protocadherin delta 2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107156267 (Pcdh19)
Cell adhesion molecules [BR:
mmma04515
]
Cadherins
Protocadherins
107156267 (Pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
107156267
NCBI-ProteinID:
XP_015357790
Ensembl:
ENSMMMG00000016169
UniProt:
A0A8C5ZPT5
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPTLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQDKNAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDNCGPTKRTFATFGK
DVSDHPAEERSTLKGKRTVDVTVCSPKVNGAIREAGNGCEAISPVTSPLHLKSPLPTKPS
MSYTVALAPPARDLEQYVNNVNNGPSRPSEAEPRGADSEKIMHEVNPILKEGRDKESPGV
KRLKDIVL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactcctgctgccggtgctgctgctgctggccgtactgtggacgcaggcggcc
gccctcattaacctcaagtactcagtggaagaagagcagcgtgccgggacggtaatcgct
aacgtggccaaggacgcgcgagaggcgggcttcgcgctggacccccgacaggcctccgct
ttccgtgtggtgtccaattccgctccgcacctggtggacatcaaccctagctcaggcctg
ctggtcaccaagcagaagattgaccgcgacctgctgtgccgtcagagcccgaagtgcatc
atctctctcgaggttatgtccagctcaatggaaatctgcgtgattaaggtggagatcaag
gacctgaacgacaatgcgcccagtttcccagcggcacagattgagctagagatatcagag
gcggccagccccggcacacgtatcccgctggacagcgcctatgatcccgactctggcagc
tttggggtgcagacttatgagctcacgcccaacgaactgttcggcctggagatcaagacg
cgtggcgacggttcacgctttgctgaactcgtggtggagaaaagtctagaccgcgagact
cagtcgcactacagttttcgaatcactgcactcgatggcggagacccgccgcacttgggc
accgtgggcctcagcatcaaggtgactgactccaatgacaacaacccggtgtttggcgag
tccacctacgcggtgagcgtgcctgagaactcgcctcccaacacacccgtcattcgcctt
aatgctagtgacccagacgagggcaccaacggccaggttgtctactctttctatggctat
gtcaacgaccgaacacgtgagctcttccaaatcgatccacacagtggcttggtcactgtc
actggtgccctagactatgaagagggccacgtgtacgaactggacgttcaggccaaggac
ctggggcccaactctatcccagcacattgcaaggtcacagtcagcgttctggacaccaat
gacaacccaccggtaatcaacttgctatcggtcaacagtgagcttgtggaggtgagcgag
agcgcccccccaggctacgtgatcgccctagttcgggtgtccgatcgcgactcaggcctc
aatggacgagtgcagtgccgtttgctgggcaacgtgccatttcgcctgcaggagtatgag
agcttctccactatcctggtggacggtcggctggatcgtgagcagcacgatcagtacaat
cttaccattcaggcgcgcgatggcggcgtacctatgctgcaaagtgccaagtcctttaca
gtgcgcataactgatgagaacgacaaccacccgcacttctctaagccctactaccaggtc
attgtgcaggagaataacactccaggcgcttatcttctctctgtgtctgcccgcgatcct
gatctgggtctcaatggcagtgtctcctaccagatagtgccgtcgcaggtgcgggacatg
cctgtgttcacctatgtctccatcaatcccaattcgggtgatatctatgctctgcgatcc
ttcaaccatgagcagaccaaggcatttgaattcaaggtgctggccaaggatggtggcctg
ccctcactgcaaagcaacgccacagtgcgggtcatcatcctagacgtcaatgacaatacc
ccagttatcacagccccgacactaatcaatggcactgctgaggtctacatcccccgaaac
tcaggcataggctacctggtgactgttgtcaaggcagacgactacgacgagggcgaaaat
ggtcgagttacctatgacatgactgagggtgaccgtggcttctttgaaatagaccaggtt
aatggcgaagtcaggaccacccgcaccttcagcgagagctctaaagcttcctatgagctt
attgtggtggcccatgaccacggcaagacgtctctctcagcctctgcgctggtcctaatc
tacctttccccagctcttgatgcccaagagtcaatgggctcagtgaacctatccttgatt
ttcattatcgccctgggctctattgctggcatcctgtttgtcactatgatcttcgtggca
atcaagtgcaagcgcgacaacaaagagatccgaacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcggtttctcccattagcgaggagcaagacaaaaatgcagaggagaaagtgagcctaagg
ggaaagagaatcgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgcctggtaccccgggatgtggaggagacagacaagatgaat
gttgtcagttgctcctccctgacctcctccctcaactatttcgactaccaccagcagacg
ctgcccctgggctgccgccgctctgagagcactttcctgaatgtagagaaccagaatact
cgcaataccagcgccaaccacatctaccatcactctttcaacagccagggcccccagcag
ccagatctgatcatcaatggtgtgcctctgcctgagactgaaaattattcttttgattcc
aactatgtgaatagccgagcccatttaatcaaaagcagctccaccttcaaggacctagag
ggcaacagcctgaaggatagtggacatgaggagagtgaccagactgacagtgagcatgat
gtccagaggagcctgtattgtgatactgctgtcaacgatgtgctgaataccagtgtgacg
tccatgggatctcagatgcctgaccatgatcagaatgaagggtttcattgcagagaagaa
tgccggattcttggccactctgacaggtgctggatgccccggaatcccatgcccactcgt
tccaagtctcctgagcatgtgaggaacatcatcgcgctctccattgaagctactgctgct
gatgttgaagcttacgacaactgcggccccaccaagcggacttttgcaacctttgggaaa
gatgtcagcgatcacccagctgaggagaggtccaccctgaaagggaagaggactgtcgat
gtaaccgtctgtagtcccaaggtcaatggcgctatccgggaggcaggcaacggctgtgag
gccattagccctgtcacctcccccctccacctcaagagccctctgcccaccaagccttcc
atgtcttacaccgttgccctggctcccccggcccgtgatctggagcagtatgtcaataat
gtcaacaatggcccttcccgtccttctgaagctgagccccgtggagctgacagcgagaaa
atcatgcatgaggttaaccccattctgaaggagggtcgcgacaaagagtcccctggtgtg
aagcggctgaaggatatcgttctctaa
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