KEGG   Marmota marmota marmota (Alpine marmot): 107156267
Entry
107156267         CDS       T09644                                 
Symbol
Pcdh19
Name
(RefSeq) protocadherin-19 isoform X2
  KO
K16499  protocadherin delta 2
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmma04515]
    107156267 (Pcdh19)
Cell adhesion molecules [BR:mmma04515]
 Cadherins
  Protocadherins
   107156267 (Pcdh19)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 107156267
NCBI-ProteinID: XP_015357790
Ensembl: ENSMMMG00000016169
UniProt: A0A8C5ZPT5
LinkDB
Position
Unknown
AA seq 1148 aa
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPTLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQDKNAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDNCGPTKRTFATFGK
DVSDHPAEERSTLKGKRTVDVTVCSPKVNGAIREAGNGCEAISPVTSPLHLKSPLPTKPS
MSYTVALAPPARDLEQYVNNVNNGPSRPSEAEPRGADSEKIMHEVNPILKEGRDKESPGV
KRLKDIVL
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggagtcactcctgctgccggtgctgctgctgctggccgtactgtggacgcaggcggcc
gccctcattaacctcaagtactcagtggaagaagagcagcgtgccgggacggtaatcgct
aacgtggccaaggacgcgcgagaggcgggcttcgcgctggacccccgacaggcctccgct
ttccgtgtggtgtccaattccgctccgcacctggtggacatcaaccctagctcaggcctg
ctggtcaccaagcagaagattgaccgcgacctgctgtgccgtcagagcccgaagtgcatc
atctctctcgaggttatgtccagctcaatggaaatctgcgtgattaaggtggagatcaag
gacctgaacgacaatgcgcccagtttcccagcggcacagattgagctagagatatcagag
gcggccagccccggcacacgtatcccgctggacagcgcctatgatcccgactctggcagc
tttggggtgcagacttatgagctcacgcccaacgaactgttcggcctggagatcaagacg
cgtggcgacggttcacgctttgctgaactcgtggtggagaaaagtctagaccgcgagact
cagtcgcactacagttttcgaatcactgcactcgatggcggagacccgccgcacttgggc
accgtgggcctcagcatcaaggtgactgactccaatgacaacaacccggtgtttggcgag
tccacctacgcggtgagcgtgcctgagaactcgcctcccaacacacccgtcattcgcctt
aatgctagtgacccagacgagggcaccaacggccaggttgtctactctttctatggctat
gtcaacgaccgaacacgtgagctcttccaaatcgatccacacagtggcttggtcactgtc
actggtgccctagactatgaagagggccacgtgtacgaactggacgttcaggccaaggac
ctggggcccaactctatcccagcacattgcaaggtcacagtcagcgttctggacaccaat
gacaacccaccggtaatcaacttgctatcggtcaacagtgagcttgtggaggtgagcgag
agcgcccccccaggctacgtgatcgccctagttcgggtgtccgatcgcgactcaggcctc
aatggacgagtgcagtgccgtttgctgggcaacgtgccatttcgcctgcaggagtatgag
agcttctccactatcctggtggacggtcggctggatcgtgagcagcacgatcagtacaat
cttaccattcaggcgcgcgatggcggcgtacctatgctgcaaagtgccaagtcctttaca
gtgcgcataactgatgagaacgacaaccacccgcacttctctaagccctactaccaggtc
attgtgcaggagaataacactccaggcgcttatcttctctctgtgtctgcccgcgatcct
gatctgggtctcaatggcagtgtctcctaccagatagtgccgtcgcaggtgcgggacatg
cctgtgttcacctatgtctccatcaatcccaattcgggtgatatctatgctctgcgatcc
ttcaaccatgagcagaccaaggcatttgaattcaaggtgctggccaaggatggtggcctg
ccctcactgcaaagcaacgccacagtgcgggtcatcatcctagacgtcaatgacaatacc
ccagttatcacagccccgacactaatcaatggcactgctgaggtctacatcccccgaaac
tcaggcataggctacctggtgactgttgtcaaggcagacgactacgacgagggcgaaaat
ggtcgagttacctatgacatgactgagggtgaccgtggcttctttgaaatagaccaggtt
aatggcgaagtcaggaccacccgcaccttcagcgagagctctaaagcttcctatgagctt
attgtggtggcccatgaccacggcaagacgtctctctcagcctctgcgctggtcctaatc
tacctttccccagctcttgatgcccaagagtcaatgggctcagtgaacctatccttgatt
ttcattatcgccctgggctctattgctggcatcctgtttgtcactatgatcttcgtggca
atcaagtgcaagcgcgacaacaaagagatccgaacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcggtttctcccattagcgaggagcaagacaaaaatgcagaggagaaagtgagcctaagg
ggaaagagaatcgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgcctggtaccccgggatgtggaggagacagacaagatgaat
gttgtcagttgctcctccctgacctcctccctcaactatttcgactaccaccagcagacg
ctgcccctgggctgccgccgctctgagagcactttcctgaatgtagagaaccagaatact
cgcaataccagcgccaaccacatctaccatcactctttcaacagccagggcccccagcag
ccagatctgatcatcaatggtgtgcctctgcctgagactgaaaattattcttttgattcc
aactatgtgaatagccgagcccatttaatcaaaagcagctccaccttcaaggacctagag
ggcaacagcctgaaggatagtggacatgaggagagtgaccagactgacagtgagcatgat
gtccagaggagcctgtattgtgatactgctgtcaacgatgtgctgaataccagtgtgacg
tccatgggatctcagatgcctgaccatgatcagaatgaagggtttcattgcagagaagaa
tgccggattcttggccactctgacaggtgctggatgccccggaatcccatgcccactcgt
tccaagtctcctgagcatgtgaggaacatcatcgcgctctccattgaagctactgctgct
gatgttgaagcttacgacaactgcggccccaccaagcggacttttgcaacctttgggaaa
gatgtcagcgatcacccagctgaggagaggtccaccctgaaagggaagaggactgtcgat
gtaaccgtctgtagtcccaaggtcaatggcgctatccgggaggcaggcaacggctgtgag
gccattagccctgtcacctcccccctccacctcaagagccctctgcccaccaagccttcc
atgtcttacaccgttgccctggctcccccggcccgtgatctggagcagtatgtcaataat
gtcaacaatggcccttcccgtccttctgaagctgagccccgtggagctgacagcgagaaa
atcatgcatgaggttaaccccattctgaaggagggtcgcgacaaagagtcccctggtgtg
aagcggctgaaggatatcgttctctaa

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