KEGG   Marmota marmota marmota (Alpine marmot): 107156278
Entry
107156278         CDS       T09644                                 
Symbol
Shh
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04340  Hedgehog signaling pathway
mmma04360  Axon guidance
mmma05200  Pathways in cancer
mmma05205  Proteoglycans in cancer
mmma05217  Basal cell carcinoma
mmma05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    107156278 (Shh)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    107156278 (Shh)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    107156278 (Shh)
   05205 Proteoglycans in cancer
    107156278 (Shh)
  09162 Cancer: specific types
   05226 Gastric cancer
    107156278 (Shh)
   05217 Basal cell carcinoma
    107156278 (Shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mmma01002]
    107156278 (Shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmma00536]
    107156278 (Shh)
Peptidases and inhibitors [BR:mmma01002]
 Cysteine peptidases
  Family C46: hedgehog family
   107156278 (Shh)
Glycosaminoglycan binding proteins [BR:mmma00536]
 Heparan sulfate / Heparin
  Morphogens
   107156278 (Shh)
SSDB
Motif
Pfam: HH_signal Peptidase_M15_3 Hint Ribosomal_S6e
Other DBs
NCBI-GeneID: 107156278
NCBI-ProteinID: XP_048641354
LinkDB
Position
Unknown
AA seq 293 aa
MDEMLLLARCLLVVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAGKTPHAQPFSISLDPTQYGTLTPGLSCKAICWCKKPLFSTDRGGEGDGGG
GGRAPQPAPGAAEAPGAAATTGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
NT seq 882 nt   +upstreamnt  +downstreamnt
atggacgagatgctgctgctggcgagatgtctgctcgtggtcctggtctcctcgctgctg
gtgtgctcggggctggcgtgcggacccggcaggggatttgggaagaggcgccaccccaaa
aagctgacccctttagcctacaagcagtttattcccaatgtggccgagaagaccctgggg
gccagcggcagatatgaagggaagatctccagaaactctgagcgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaagaaaacacgggagcagacaggctg
atgactcagaggtgtaaggacaagttgaatgccttagccatctctgtgatgaaccagtgg
ccaggagtgaagctgcgggtgaccgagggctgggacgaggatggccaccactcagaggag
tcactgcactatgagggtcgtgctgtggacatcaccacatctgaccgtgaccggagcaaa
tatggcatgctggcccgcctggccgtggaggccggctttgactgggtgtactatgagtcc
aaggcccatatccactgctccgtgaaagcaggtaagacccctcatgcccagcccttctcc
atatcccttgaccccacacagtacggtaccctcactccaggtctgtcctgtaaggccatc
tgttggtgcaagaagccactattttctacggaccgcggcggcgaaggcgacggcgggggc
ggaggccgggccccccagcccgcgccaggggcagctgaggcgccaggggcggcggccacc
acgggcatccactggtactcccaactgctctaccaaattggcacctggctgttggacagc
gaggccctgcacccgctgggcatggcggtcaagtccagctga

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