Marmota marmota marmota (Alpine marmot): 107156439
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Entry
107156439 CDS
T09644
Symbol
Atxn2
Name
(RefSeq) ataxin-2 isoform X7
KO
K23625
ataxin-2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma05014
Amyotrophic lateral sclerosis
mmma05017
Spinocerebellar ataxia
mmma05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107156439 (Atxn2)
05017 Spinocerebellar ataxia
107156439 (Atxn2)
05022 Pathways of neurodegeneration - multiple diseases
107156439 (Atxn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107156439 (Atxn2)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107156439 (Atxn2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
107156439
NCBI-ProteinID:
XP_015358000
Ensembl:
ENSMMMG00000002839
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIM
ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELSTSEEL
EALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVIS
WGSGRQNSPRMGQPGSGAMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPAGGTWSSVVSGVPRLSP
KTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPIPAASPTPASPASNRAVTPSME
AKDSRLQDQRQNSPAGNKENVKPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFR
LQPSSTSESMDQLLNKNRDGEKSRDVIKDKIEPSSKDSFIENSSSNCTSGSSKPNSPSIS
PSILSNTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRS
FSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIP
MTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQ
FPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMY
ACPKLPYNKETSPSFYFAISTGSLAQQYAHPNTTLHPHTPHPQPSATPTGQQQSQHGGSH
PAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTV
FTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSA
LQPIPVSTTAHFPYMTHPSGEACVCRGRRGTPSILLAQVEWQAGPALLAPYSRIARPVLV
CTGGTVMISQGQGLRLPGAESVCVLMVYRIWLDEKQQQQHSG
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggttcatatacttacatcagttgttggatccaaatgtgaggtacaagtgaaa
aatggaggtatttatgaaggagtttttaaaacatacagtcctaagtgcgatttggtactt
gatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatg
gagagtattttgttcaagtgttcagactttgttgtggtacagtttaaagatatggactcc
agttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtgaatggtgaa
cacaaagagaaggacctggagccctgggatgcaggtgaactctcaaccagcgaagaactg
gaggctttggaaaacgatgtatctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattatggagtagtgtctacatatgatagcagtttatcttcatatacggtaccc
ttagaaagggataactcagaagaatttttaaaacgggaagcaagggcaaaccagttagca
gaagaaattgaatcaagtgctcagtacaaagctcgggtggccctggaaaatgatgataga
agcgaggaagaaaaatatacagcagttcagagaaattccagtgaacgtgaggggcacagc
ataaacactagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcc
tggggaagtgggagacagaattcaccgcgtatgggccagcctggatcgggtgccatgcca
tcaagatccacttctcacacttcagatttcaacccgaattctggttcagaccaaagagta
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtcccca
aaggcccagcgacaccctcgaaatcacagagtttctgctgggaggggctctatatctagt
ggcctagaatttgtatcccacaatccaccaagtgaagcagctactcctccagtggcaagg
actagtcctgcagggggaacatggtcatcagtggtcagtggtgttccaagattatctccc
aaaactcacagacccaggtctcccagacagaacagtattggaaatactcccagtgggcca
gtgcttgcttctccccaagctggtatcattccagctgaagctgttgccatgcccattcca
gctgcatctcctacacctgccagtcctgcatccaacagagctgtgaccccatcgatggaa
gctaaagattccaggcttcaagatcagaggcagaactctccagcagggaataaagaaaat
gttaagcccaatgaaacatcacctagcttttcaaaagctgaaaacaaaggtatatcacca
gttgtttctgaacatagaaaacaaattgatgatttaaagaagtttaagaatgattttagg
ttacagccaagttctacttctgaatctatggatcaactactaaacaaaaatagagatgga
gaaaaatcaagagatgtgatcaaagacaaaattgaaccaagttctaaggattctttcatt
gaaaatagcagcagcaactgcaccagtggcagcagcaagccgaacagtcccagtatctcc
ccttcaatacttagtaacactgagcacaagaggggacctgaggttacatcccaaggggtg
cagacttctagcccagcatgtaaacaagagaaggatgataaagaggagaagaaagatgca
gctgagcaagttaggaaatcaacattgaatcccaatgcaaaggagttcaaccctcgatcc
ttttctcagccaaagccttctacaaccccaacttctcctcgacctcaagcacaacctagc
ccatctatggtgggtcaccaacagccaactccagtttatactcagcctgtttgttttgca
ccaaatatgatgtatccagtcccagtgagcccaggtgtgcaacctttatacccaatacct
atgacgcccatgccagtgaatcaagccaagacatatagagcagtaccaaatatgccccaa
cagcggcaagaccagcatcatcagagcaccatgatgcacccagcctctgcagcaggtcca
cccattgtagccaccccaccagcttactccactcagtatgttgcctatagtcctcagcag
tttccaaatcagccactagttcagcatgtgccacattatcagtctcagcatcctcatgtt
tatagtcctgtaatacagggtaacgcgagaatgatggcaccaccagcacatgcccagcct
ggtttagtatcttcttctgcaacccagtacggggctcacgagcagacacacgcgatgtac
gcatgccccaaattaccatacaacaaggagacaagcccttctttctactttgccatttcc
acgggctcccttgctcagcagtatgcgcaccctaacactaccctgcacccacatactcca
catcctcagccttcagctacccccactggacagcaacaaagccaacatggtggaagtcat
cctgcacccagtcctgttcagcaccatcagcaccaggccgcccaggctctccatctggcc
agtccacagcagcagtcagccatttaccacgcggggctcgcaccaaccccaccttccatg
acacctgcctccaatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtc
tttacaatccatccttctcacgttcagccggcatataccaatccaccccacatggcccat
gtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgcca
atgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgca
ctacagcccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcaggt
gaggcgtgtgtgtgcaggggccgccggggcaccccaagcattctgctcgcacaggttgaa
tggcaggcagggccagcgcttctagccccgtactcaagaatagcaagacccgtcttagtg
tgcacaggagggactgtgatgatcagtcaaggtcagggtctgaggcttccaggagccgag
tctgtgtgtgttctgatggtatacaggatttggcttgatgagaagcagcagcagcagcat
tccggatag
DBGET
integrated database retrieval system