KEGG   Marmota marmota marmota (Alpine marmot): 107156439
Entry
107156439         CDS       T09644                                 
Symbol
Atxn2
Name
(RefSeq) ataxin-2 isoform X7
  KO
K23625  ataxin-2
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma05014  Amyotrophic lateral sclerosis
mmma05017  Spinocerebellar ataxia
mmma05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    107156439 (Atxn2)
   05017 Spinocerebellar ataxia
    107156439 (Atxn2)
   05022 Pathways of neurodegeneration - multiple diseases
    107156439 (Atxn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107156439 (Atxn2)
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107156439 (Atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 107156439
NCBI-ProteinID: XP_015358000
Ensembl: ENSMMMG00000002839
LinkDB
Position
Unknown
AA seq 1122 aa
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIM
ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELSTSEEL
EALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVIS
WGSGRQNSPRMGQPGSGAMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPAGGTWSSVVSGVPRLSP
KTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPIPAASPTPASPASNRAVTPSME
AKDSRLQDQRQNSPAGNKENVKPNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFR
LQPSSTSESMDQLLNKNRDGEKSRDVIKDKIEPSSKDSFIENSSSNCTSGSSKPNSPSIS
PSILSNTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRS
FSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIP
MTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQ
FPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMY
ACPKLPYNKETSPSFYFAISTGSLAQQYAHPNTTLHPHTPHPQPSATPTGQQQSQHGGSH
PAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTV
FTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSA
LQPIPVSTTAHFPYMTHPSGEACVCRGRRGTPSILLAQVEWQAGPALLAPYSRIARPVLV
CTGGTVMISQGQGLRLPGAESVCVLMVYRIWLDEKQQQQHSG
NT seq 3369 nt   +upstreamnt  +downstreamnt
atgaggatggttcatatacttacatcagttgttggatccaaatgtgaggtacaagtgaaa
aatggaggtatttatgaaggagtttttaaaacatacagtcctaagtgcgatttggtactt
gatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatg
gagagtattttgttcaagtgttcagactttgttgtggtacagtttaaagatatggactcc
agttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtgaatggtgaa
cacaaagagaaggacctggagccctgggatgcaggtgaactctcaaccagcgaagaactg
gaggctttggaaaacgatgtatctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattatggagtagtgtctacatatgatagcagtttatcttcatatacggtaccc
ttagaaagggataactcagaagaatttttaaaacgggaagcaagggcaaaccagttagca
gaagaaattgaatcaagtgctcagtacaaagctcgggtggccctggaaaatgatgataga
agcgaggaagaaaaatatacagcagttcagagaaattccagtgaacgtgaggggcacagc
ataaacactagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcc
tggggaagtgggagacagaattcaccgcgtatgggccagcctggatcgggtgccatgcca
tcaagatccacttctcacacttcagatttcaacccgaattctggttcagaccaaagagta
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtcccca
aaggcccagcgacaccctcgaaatcacagagtttctgctgggaggggctctatatctagt
ggcctagaatttgtatcccacaatccaccaagtgaagcagctactcctccagtggcaagg
actagtcctgcagggggaacatggtcatcagtggtcagtggtgttccaagattatctccc
aaaactcacagacccaggtctcccagacagaacagtattggaaatactcccagtgggcca
gtgcttgcttctccccaagctggtatcattccagctgaagctgttgccatgcccattcca
gctgcatctcctacacctgccagtcctgcatccaacagagctgtgaccccatcgatggaa
gctaaagattccaggcttcaagatcagaggcagaactctccagcagggaataaagaaaat
gttaagcccaatgaaacatcacctagcttttcaaaagctgaaaacaaaggtatatcacca
gttgtttctgaacatagaaaacaaattgatgatttaaagaagtttaagaatgattttagg
ttacagccaagttctacttctgaatctatggatcaactactaaacaaaaatagagatgga
gaaaaatcaagagatgtgatcaaagacaaaattgaaccaagttctaaggattctttcatt
gaaaatagcagcagcaactgcaccagtggcagcagcaagccgaacagtcccagtatctcc
ccttcaatacttagtaacactgagcacaagaggggacctgaggttacatcccaaggggtg
cagacttctagcccagcatgtaaacaagagaaggatgataaagaggagaagaaagatgca
gctgagcaagttaggaaatcaacattgaatcccaatgcaaaggagttcaaccctcgatcc
ttttctcagccaaagccttctacaaccccaacttctcctcgacctcaagcacaacctagc
ccatctatggtgggtcaccaacagccaactccagtttatactcagcctgtttgttttgca
ccaaatatgatgtatccagtcccagtgagcccaggtgtgcaacctttatacccaatacct
atgacgcccatgccagtgaatcaagccaagacatatagagcagtaccaaatatgccccaa
cagcggcaagaccagcatcatcagagcaccatgatgcacccagcctctgcagcaggtcca
cccattgtagccaccccaccagcttactccactcagtatgttgcctatagtcctcagcag
tttccaaatcagccactagttcagcatgtgccacattatcagtctcagcatcctcatgtt
tatagtcctgtaatacagggtaacgcgagaatgatggcaccaccagcacatgcccagcct
ggtttagtatcttcttctgcaacccagtacggggctcacgagcagacacacgcgatgtac
gcatgccccaaattaccatacaacaaggagacaagcccttctttctactttgccatttcc
acgggctcccttgctcagcagtatgcgcaccctaacactaccctgcacccacatactcca
catcctcagccttcagctacccccactggacagcaacaaagccaacatggtggaagtcat
cctgcacccagtcctgttcagcaccatcagcaccaggccgcccaggctctccatctggcc
agtccacagcagcagtcagccatttaccacgcggggctcgcaccaaccccaccttccatg
acacctgcctccaatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtc
tttacaatccatccttctcacgttcagccggcatataccaatccaccccacatggcccat
gtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgcca
atgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgca
ctacagcccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcaggt
gaggcgtgtgtgtgcaggggccgccggggcaccccaagcattctgctcgcacaggttgaa
tggcaggcagggccagcgcttctagccccgtactcaagaatagcaagacccgtcttagtg
tgcacaggagggactgtgatgatcagtcaaggtcagggtctgaggcttccaggagccgag
tctgtgtgtgttctgatggtatacaggatttggcttgatgagaagcagcagcagcagcat
tccggatag

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