Marmota marmota marmota (Alpine marmot): 107156512
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Entry
107156512 CDS
T09644
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04512
ECM-receptor interaction
mmma04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107156512 (Frem1)
04518 Integrin signaling
107156512 (Frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mmma04091
]
107156512 (Frem1)
Lectins [BR:
mmma04091
]
C-Type lectins
Lecticans
107156512 (Frem1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
107156512
NCBI-ProteinID:
XP_015358071
Ensembl:
ENSMMMG00000007262
LinkDB
All DBs
Position
Unknown
AA seq
2189 aa
AA seq
DB search
MARSEWAPVSMSSLGWGGLSVLLLLLLLDRASPTFISLNHGMRVMKGSSAFLSEDDLKFA
IPKEKDACKVEVVMNEPITQRVGKLMPQVFDCHFLPNEVRYVHNGCPILDEDTVKLRLYR
FTETDTFTETFTLRVYLMEPDCNIIRMSSNVLEVSEFYGLSRAIDKNLLRFDYERTAGLE
CTVRLDPLRTRLPAHGQMVVVEPRPEGPRGDQPHSFFPQSQLGMELKCPGGSCTLELKKI
ASLQVSCEEFLMMGLRYQHMQPPSPNIDYISIQLDLTDSRSQIVYKSESAWLPVYIRAGI
PNQIPRAAFMAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYMTHLLD
HTRPVSSFTWKDLRDMQIAYQPPNSSHSERRNYEVELEVYDFFFGRSAPVTVHVSIRTAD
TNAPRVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVTVDGLHHGQLTVRGGKGFL
FTVADLQTGVVRYHHDDSDTTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLITNVVI
ELEEGQTILVQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGMIGYPVSGFLQRD
LFNGIIYYRHFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRH
LVVKETEVAYITKKHLHFLDTESYDRELLYTITTPPCFSFNDRYLDAGKLFMVDSIPKLT
KNPTALGLRSFTQHAVNYMKVAYMPPMQDIGPHLRHVQFTFSISNQHGGTLHGICFNITI
LPVDNQVPEVSTNPLRVAEGGQCIISTEHILVSDVDTMLDNIYISLQGLPLHGRLDLNGF
PLDAGGTFSWGDLHTLKVRYQHDGSEVLQDNILLEVTDGTNSAEFVLHVEVFPINDEPPI
LKADLIPMMHCSEGGEVIITPEHIFATDMDSDDLKLMVMIAREPQHGVVWKAGVQVDQFS
QGDIISGAVTYKHTGGEIGLVPCFDTITLVISDGEAGPFVNGCCYSGPNPSVPLHESFPV
YDLNITVHPVDNQPPSIAIGTLFLVDEGFSAALTINHLSANDPDTAADDLEFVLVSPPQF
GYLENTLPSVGFEKSNMGISIASFHWKDMKALHINYVQSRHLRMEPTTDQFVVYVTDGKR
HSLQTPFYVIINPTNDEVPEFVVQNITVCEGQATELDSSVISAADLDIPKDPLLFSITQK
PRHGLLINRMLSKDSPQNKQSANPDQKQELVHSFSLELFKTGMRLTYVHDDSESFADDFT
IQLSDGKHKILKTISVEITPVNDEKPMLSKKAEIEMNMGDTRIISSAVLSAVDKDSPREK
IYYLFERLPQHGQLQLKIGRDWVSLSLGMKCTQEEVDLNLLRYTHTGAMDSQNRDSFTFY
LWDGDNRSPAFDCHIIIKDMGKGDIVLLAKPLVVSKGDRGFLTTATLLAVDGTDRPEELL
YAITSPPRYGQVEYVRYPGVPITSFSQMDIAGQKVCYIHKSGAAVPSDSFRFIVSNGLWT
KHGVFEITLETVDRALPVVTRNKGMRLAEGAMGLLSPDLLQLTDLDTPAENLTFLLIQLP
QHGQLYLRGTVLLRHNFTQWDVDSGNVAYQHSGGSSQIDHFTFMATDRTNQGFVVDGRVR
EEPVPFTIQVEHLDKIAPRITLLRSPSQVGLLKNGCYGIYITSRVLKASDPDTEDHQIIF
KILRGPLHGHLENTTTGEFIHEKFSQKDLYSKTILYIINPSLEVNSDIVEFQIMDPTGNS
ATPQILELKWSHIEWSQTEYEVCENVGILSLEVTRRGYSMDSAFVGVKVNQVSAAAGKDF
TVTPSKLIQFDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDS
KGGQCHPSYSFNQSKPNTWEKGIWHPLHPGSPSPTTSGSLHLERRPPPSSKQLATTRGDS
LQGVDSAALSQRKLRTHSNRKAVHPSSVYRNRTDIIYNYHGIASLKLEDDSAPPPQRKAK
VSIISQPQKTMKVAELPAVDKVESTTDSHFPRQDQLPLFPKNCTMELKGLFHFEESTQKL
YGCNGIAWKSWSPQTKEVEDKSCPVGWHLHSGYCHTLIPKQKGTWTMATRACREQYLGNL
VTVFSRQHMQWLWDISGRKPFWIGLNDQAHAGHWEWIGGEPVTFTNWRREPPQHSKPGKN
CVLVQRGGKWQTKNCMKGKPQNFMCSRKL
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atggccagaagcgagtgggcccctgtcagcatgagctctctaggttggggtggcctcagt
gtcctcctgcttctgctgctcctggaccgggccagccccaccttcatcagcctgaaccat
gggatgagggtgatgaagggcagctctgccttcctgtcagaagatgacctgaagtttgcc
atccccaaagagaaagatgcctgcaaagtggaagttgtgatgaatgagccaataacccag
agggtagggaaactcatgccacaggtctttgactgccatttccttcccaatgaagtcagg
tatgttcacaacggttgcccgattcttgatgaagacacagtgaaacttcgactttacaga
ttcactgagacagacaccttcactgaaacctttaccctgcgggtctatctcatggagcca
gactgcaacattatccgcatgagtagcaatgtcctggaggtgtctgaattctacggcctg
tcccgagccattgataagaacctgctcagattcgactatgagaggacggcgggcctggag
tgtaccgtcaggctggaccctttgagaactaggctgccagctcatggccagatggttgtg
gtggagcctcgcccagaaggaccccgtggagatcagccacacagttttttccctcagtcc
caactgggaatggaactgaagtgtccaggcggaagctgtaccctggaattgaagaaaata
gcaagtctccaagtgagctgtgaggagttcctgatgatggggcttcgttatcaacacatg
caacccccttctcccaacattgattatatctccatccaactggacctcacagatagcagg
agtcaaatagtatacaagtcagagagtgcgtggttgcctgtctacatcagagctggcatt
ccgaatcagattccaagggctgcgttcatggccatgtttattctggaagtggatcagttc
atcctgacctctttgactacgtcagttctggactgtgaagaggatgagacccccaaaccc
ttgctggtgttcaacattacgaaagccccactccagggctacatgactcacctgttggat
cacaccagaccggtctcctcattcacctggaaggacctcagggacatgcagattgcctat
cagcctcctaacagcagccattctgagaggagaaattatgaggtggagttggaggtatat
gactttttctttggaaggagtgcacctgtcacagtccatgtctccatcagaacagcagac
accaatgccccccgggtgtcctggaatacaggtctgaatctcctggagggacagtctcgg
gctatcacttgggaacagtttcagattgttgacaatgatgacattggtgccgtccagttg
gtcactgttgatggcctgcatcacggacagcttacagtgagaggggggaaaggatttctc
ttcactgtggctgaccttcagactggagttgttcgctatcatcatgacgacagcgacacc
actaaagactttgtggtcttcaggatcttcgatggccatcacagcatccgtcacaagttt
cctatcaacatcttgcccaaggatgacagtcccccgttcctcataaccaatgttgtgatt
gaactggaggaaggacagaccatcctggtccagggttccatgctgagagcctcagacatg
gattccagtgacgactacatcttctttaatatcacaaaaccccctcaggctggagagatc
atgaagaagccagggccagggatgataggctatcctgtctctggctttcttcagagggat
ctgtttaatgggatcatttactatcgtcactttggtggagaaatctttgaagattctttc
gaatttgtcctgtgggacagccacgaacctccaaatctctcagtgccacaggtggtgacc
atccatatcactccagtggatgaccagcttccaaaagaggctcctggggtttctcggcat
ttggttgtcaaggaaacggaggtggcctacataacgaagaagcatctacatttcctagat
acagaatcttatgatagggagctgctctacacaataaccactcctccctgtttctctttc
aatgacagatatttggatgctgggaaattattcatggtggacagcataccaaagctaacc
aaaaatcctacagccctggggctgaggtcatttactcagcatgctgtgaactatatgaaa
gtggcctacatgccacccatgcaagatataggtcctcatctccgacatgtccagttcacc
ttttccatcagtaaccagcatggtggcactctgcatgggatctgctttaacattacaatt
ctcccagtggacaatcaagttcctgaggtatccactaaccctctgagagtggctgaggga
ggccagtgcatcatcagcacagagcacattctggtttctgatgtggataccatgttggac
aatatctacatttccctgcaggggttgcctctgcacggaaggctggatttgaatggattt
cctctagatgctgggggcacattttcttggggagaccttcataccttaaaagttaggtat
caacatgatggatctgaggttcttcaggacaacatactcttggaggtcacagatggcaca
aattcagcagaatttgttttacatgttgaggtgtttcctataaatgatgagccgccaatc
ctgaaggctgacctcatccccatgatgcattgctcagagggtggagaggtgatcatcact
cctgaacacatttttgctactgatatggatagtgatgacttgaaactgatggttatgatt
gcccgagaacctcagcatggggtggtgtggaaggctggtgttcaagtagaccagttctct
cagggagatattatctcaggggctgtgacatacaaacacacaggtggtgagattggcctg
gtgccttgttttgataccattactttggtgatttcggatggagaagctggcccttttgtg
aatggctgttgttacagtggacctaatccatctgttcctctccatgagtcctttccagtg
tatgatctcaacatcacagtacatccagtagacaatcagccaccttcaattgcaataggt
accctgttccttgtagatgaggggttctcagcagcccttaccattaaccatttgtctgcc
aatgatcctgacactgctgcagatgacttggaatttgttttggtttctcctccccaattt
ggttaccttgaaaacacacttccttctgtgggttttgagaaaagcaatatgggcataagt
atagcttcctttcactggaaagacatgaaggctttgcacatcaactatgtgcaatccaga
cacctgaggatggaaccgaccactgaccagtttgtggtgtatgtcacagatgggaagcga
cactccttgcagactccattttatgttataatcaaccccacaaatgatgaagttcctgag
tttgtagtgcagaatattactgtgtgtgagggtcaggcgacagagctggattcttctgtc
atcagtgctgctgacctggacatccccaaggaccccttattgttcagcatcactcagaaa
ccacgtcatggtctcctcatcaataggatgctcagcaaagactctcctcagaataagcag
tcagccaaccctgaccagaagcaggaacttgttcacagtttttccttggaacttttcaag
actggaatgaggttgacctatgtgcatgatgactctgagagctttgctgatgactttaca
atccaattgtcagatgggaaacacaagatacttaaaaccatttcagtagagatcactccg
gttaatgatgagaaaccaatgctaagcaagaaggctgaaattgaaatgaatatgggggat
acccgtattatttctagcgccgttctttccgctgtagacaaagactcacccagggagaag
atttactatttatttgaaaggcttccccaacatggacaacttcagcttaagatagggaga
gactgggtttctctctccctgggcatgaaatgtacccaggaagaagtggatctgaatttg
ctgagatacacgcacaccggggcaatggactcccagaatcgagatagcttcaccttctac
ctctgggatggtgacaacagatcacctgcatttgactgtcacatcatcatcaaggatatg
ggaaaaggtgatattgtccttcttgcaaaaccacttgtggtatctaaaggcgacagaggg
ttcttgacgactgccactcttctggctgtggatggaacagacaggcctgaggaactgctg
tatgccattacctctccaccgcggtatggccaggtggaatatgtccgctatcccggggtc
cccattacaagcttcagccaaatggacatagcggggcagaaggtctgctacatacataag
agtggggcagctgtgcccagtgacagcttcagattcatcgtcagcaacggactgtggacc
aagcacggggtgtttgagatcacactggagactgtagacagagccttgcctgtggtcacc
aggaacaaggggatgaggctggccgagggggccatgggcctgctttctcctgacctcctc
cagctgactgaccttgacactcctgccgaaaacctcaccttcctcctgatccagctccca
cagcatggccagctctacctgcggggaactgtactgcttcgacacaacttcactcagtgg
gatgtggacagcgggaatgtggcctatcagcactctggaggcagctcccagattgaccac
ttcactttcatggccacagataggacaaaccaaggctttgttgtggatgggagggtgcga
gaagagcctgttccattcaccattcaggtggagcatttggataaaatagcccctcggatc
acactcttgcgttccccttcacaagtgggactcctgaaaaacggctgttacgggatttac
atcacttctcgagtgttgaaggcatcggaccctgacaccgaggaccatcagataatcttt
aagattttacgaggcccactacacggacatttggagaacacaacaacaggtgaatttatc
catgagaaatttagccaaaaggacttatacagtaagaccattctttacatcataaaccca
tctttggaagtaaattcagatattgtggaatttcaaatcatggaccccacagggaactct
gccactcctcaaattttggagttgaagtggtcccatattgaatggtcacaaactgaatat
gaggtctgtgagaatgtgggcatattgtccttagaagttaccagaaggggatattccatg
gactcagcctttgtgggagtaaaggtcaatcaagtgtcagctgcagctggaaaagatttc
acagtgactccatccaaactgattcagtttgacccaggaatgtcaactaagatgtggaat
atagcaattacctatgacggattagaggaagatgatgaggtctttgaagtaattctgaac
tcccctgtgaatgcagttcttggcacgaagacaaaagctgcagtgaaaattttggactca
aaaggaggacaatgccatccttcatactccttcaaccaaagcaagcccaacacatgggag
aagggcatttggcacccgttgcatccagggtctccctcgcccaccacttctggttccctt
catctggaaagaagaccccctccatcttccaagcagctggcaaccaccaggggagactcc
ctacagggcgttgattccgcagctctttctcagaggaagcttaggacccactcgaatcgc
aaagcagttcatccatcttctgtttatagaaacagaacagacatcatctataattatcat
gggatagcttccttgaaactggaagatgacagtgccccacctccccaaaggaaggccaaa
gtatccattattagtcagccacaaaagacaatgaaagtggcagagctgcctgcagtagat
aaggtggaatccacaactgactcccacttccccagacaggaccagttgcccttatttcca
aagaattgcacaatggaattaaagggactcttccattttgaagaaagcacccaaaagctg
tatggatgcaatgggattgcctggaaatcctggagcccccaaaccaaggaagtggaagat
aaatcttgtccagttggatggcaccttcactcaggctactgtcacaccttgatcccaaag
cagaaaggcacctggaccatggctacccgagcttgcagggaacaatacctgggaaatctc
gtaactgtattctccaggcagcacatgcagtggctctgggacatcagtggaagaaagccc
ttttggataggtttgaatgaccaagcgcacgctggccactgggaatggattggaggtgaa
cctgtcaccttcaccaactggaggagagagccccctcaacactcaaagcctggaaagaac
tgtgttttggtccaaagaggaggtaaatggcaaacaaagaactgtatgaagggcaaacct
caaaatttcatgtgctccaggaaactctaa
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