Marmota marmota marmota (Alpine marmot): 107156546
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Entry
107156546 CDS
T09644
Symbol
Trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmma03016
]
107156546 (Trmt13)
Enzymes [BR:
mmma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
107156546 (Trmt13)
Transfer RNA biogenesis [BR:
mmma03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107156546 (Trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
107156546
NCBI-ProteinID:
XP_015358089
Ensembl:
ENSMMMG00000008087
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MADSARTPHATGFPAEGRCSYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISSLPEDQLE
NLIKKLRKASEGLNSTLKDHIMSHPALYDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPVLREGKLPVVGIGKHLCGVATDLALRCLVETYAASFEERNEEPLAKRIK
NDKTEKEINTLAKEGNEKNVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMQKTSFEASNITTKRKDNQNNDSEEHDEGGYRVTDDSSESLPGLLT
VEEKKKIGHLCKLLIDQGRIQYLQQKGFNPALQYYTDPLVSLENVLLTALPIHSSPETTA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcggcgcggacaccgcatgctactggctttccagcagagggtagatgcagt
tactatgtggaaaagaagaagcgattctgtagaatggtggtggccgccgggaaaaggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcggaaaagaatcctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaaacatttgaaaaaatgtaat
tcaagggagaagccaaaacctgatttctttattcaagatattaatgcaggcttgaaagat
gaaacagaaatacctgaacaattagttccaatttcttctctacctgaagaccagttggaa
aacttaattaagaaactgagaaaagcaagtgaaggtttgaattctacacttaaagatcac
attatgtcccatccagcattatatgatgcccttaatgaccctaaaaatggtgattccgca
accaagcacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctggtagaaaaagtgaccaca
agattcaaagtagatggtaaacacagaaagaaaaattcagtgtttgaaagacttcaaatt
gatattcaacatttgtgcttgaacaagattcctgtactgagagaagggaaactacctgtg
gtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttttgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacagaaaaagaaattaacactttggccaaggaaggaaatgaaaaaaatgtc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcagggccctaggccttggagcagtagaa
ttccactatttccagcgaatgagtagttgggcgacttgtgggatgcagaaaacatctttc
gaagcctcaaatattaccacaaagagaaaagataatcaaaacaatgatagcgaagagcat
gatgaaggaggatacagagtcacagatgacagctctgagagtttgcctgggcttcttact
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggtcgaatc
cagtatttacagcagaagggattcaatcctgctttacaatactatacagaccctttggta
tctttggaaaatgtattgttaactgctttaccaattcattcttcgccagaaacaactgct
taa
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integrated database retrieval system
