Marmota marmota marmota (Alpine marmot): 107156593
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Entry
107156593 CDS
T09644
Symbol
Bcan
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmma00535
]
107156593 (Bcan)
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107156593 (Bcan)
04091 Lectins [BR:
mmma04091
]
107156593 (Bcan)
Proteoglycans [BR:
mmma00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107156593 (Bcan)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107156593 (Bcan)
Lectins [BR:
mmma04091
]
C-Type lectins
Lecticans
107156593 (Bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Ig_3
I-set
hEGF
EGF_2
ig
EGF_3
Ig_2
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
107156593
NCBI-ProteinID:
XP_048670897
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MVSSTDKGTGLDTGHLAWLTGLMVERSFQHSSSLSTGMKPFSKDPLDCLKQDREQLSIAP
FVSGRDQLLADSAFGLPIMPGGLTLPALCRLLLPWAFAIFHKALGDSAFHPGPHYLLPPI
HEVIHSRRGATATLPCVLGASPPSYKVRWSKVEPGELRETLILITNGLHARGYGPLGGRA
RMRRSHRLDASLVIEGVRLEDEGRYRCELVNGIEDESVALTLLRSYGPRDRKRDRYDAFC
FTSALAGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDQCDGGWLADGSV
RFPITAPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAELSSPACSMASLLAGLLTALAL
TQVPAALADVLEGDSSGSDGLEAIVTVTETLEELQLPPEAVESESRGAIYSIPIMEDGGG
GSSTPEDPAEAPRTLLEFETQSVVPPTGSSDEEDQMLEEEERYEDEEEAEEEEEEEAVED
EDLWAWPSEFSSPVPTEPEAEDSLSQASPPARAVLQPGASPPPEGQSETPRPPRARGPPT
ETLPTPREGTLASPPPSTLVGEEIEGPELPEVPRGESEETGSSEDATSLPPATQAPEATG
ELEAPSEEDSGRTIPAGTSVQAQPVLPTDGASRGGVAVAPSSGDCVPSPCHNGGTCLEEE
EGVRCLCLPGYGGDLCDVGLRFCSPGWDAFQGACYRHFSTRRSWEEAETQCRMYGAHLAS
ISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLVRGLGWPSRPLVHSSKHAWPP
PAVTHLRPFLF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggtgagctccacagataaaggtacggggctggacacaggtcacttagcctggcttact
ggactgatggttgagagaagcttccagcactcttcttctttgagcacagggatgaagcct
ttctcaaaggacccactggactgccttaagcaggacagagagcagctgagcattgctccc
ttcgtctctggaagagaccagcttctcgcagacagtgccttcggactgcccatcatgcca
ggtggcctcacccttcctgcactgtgccgactccttctcccttgggcctttgccatcttc
cacaaagccctgggggattcagcattccacccgggcccccactacctcctgccccccatc
cacgaggtcattcactctcgtcgtggggccacggccacgctaccctgcgtcctgggcgcc
tcgcctcccagttacaaggtacgctggagcaaagtggagcccggggagctccgggagaca
ctgattctcatcaccaacggactgcacgcccggggctatgggcctctgggagggcgcgcc
aggatgcgtaggagccatcgcctggacgcctccctggtcatcgagggcgtgcgcctggag
gacgagggccggtaccgctgcgagctggtcaacggcatcgaggacgagagcgtggcgctg
actttgctccgcagctatgggccacgcgaccgcaagcgcgaccgctacgacgccttctgc
ttcacctcggctctggcaggccaggtgttcttcgtgcctgggcgactgacgctctctgaa
gcgcacgcggcgtgccggcggcgcggggcggtggtagccaaggtcgggcacctctacgcc
gcctggaagttctcggggctggaccaatgcgacggcggctggctggcggacggcagcgtg
cgcttccccatcactgctccgcggccgcgctgcgggggcctcccggaccccggggtgcgc
agcttcggcttccccagaccccagcaggcggcctacgggacctactgctacgcggagtta
tcttcaccagcctgcagcatggcctcactcctggcaggcctgctgacagccctggccctg
acccaggtccctgcagccctcgctgatgtcctggaaggggacagctcaggctctgatgga
ctagaggccatcgtcacagtgacagagaccctggaggaactgcagctgcctccggaggca
gtggagagtgagtcccgtggcgccatctactccattcccatcatggaggatggaggaggc
ggaagctccactccagaggacccggctgaggcccccaggaccctcctagaatttgaaacc
caatccgttgtaccgcccaccgggtcctctgacgaggaagaccagatgttggaggaagaa
gagagatatgaggacgaagaagaggcagaggaggaggaggaagaggaggcggtggaggac
gaggacctatgggcctggcccagcgagttcagcagccctgtccccactgagccggaagcg
gaggactcgctgtcccaggcctccccgccagcaagggcagtcctgcagcccggagcatct
ccacctcccgagggacagtcagaaactcccaggcctccaagggcccgtggaccgcctacc
gagactctgcccactcccagggaggggaccctggcgtccccaccaccttccactctggtt
ggggaggaaatcgagggtcctgagctacctgaggtccctcgaggagagagcgaagagaca
gggagctccgaggatgccacctccctgcctccagccacacaggcccccgaggccaccggg
gagctggaagccccctctgaagaggactctgggagaaccatccccgcagggacctcggtg
caggcccagccagtgctgcccactgatggcgccagccgaggtggagtggccgtggccccc
tcatcaggtgactgtgtccccagcccctgccacaatggtgggacatgcttggaggaggag
gagggggtccgctgcctgtgtctgcctggctatgggggggacctgtgcgatgttggcctc
cgcttctgcagcccgggctgggacgccttccagggcgcctgctacaggcacttctccacg
cgaaggagctgggaggaggcggagacccagtgccggatgtacggcgcacacctggccagc
atcagcacgcccgaggagcaggacttcatcaacaatcgataccgggagtaccagtggatc
gggctcaatgacaggaccattgaaggcgacttcctgtggtcggacggcgtccctctggtg
agaggcctcggctggccctcacgccctctggttcattcctcgaagcacgcctggcctccg
ccagcagtcacccacctccgccccttccttttctga
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