Marmota marmota marmota (Alpine marmot): 107156955
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Entry
107156955 CDS
T09644
Symbol
Sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107156955 (Sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107156955 (Sart1)
04121 Ubiquitin system [BR:
mmma04121
]
107156955 (Sart1)
Spliceosome [BR:
mmma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107156955 (Sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
107156955 (Sart1)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107156955 (Sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
107156955
NCBI-ProteinID:
XP_015358615
Ensembl:
ENSMMMG00000021324
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MPLVVSATSSKSSSGDASSLSIEETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINP
MAIRQREELREKLAAAKEKRLLNQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAE
KRAKLLEEMDQEFGVSTLVEEEFGQRRQDLYSARDLQGLTVEHAIDSFREGETVILTLKD
KGVLQEEEDVLVNVNLVDKERAEKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILAKYD
EELEGERPHSFRLEQGGTADGLRERELEEIRAKLRLQAQSLSSVGPRVASEYLTPEEMVT
FKKTKRRVKKIRKKEKEVIVRADDLLPLGDQTQDGDFGSRLRGRGRRRVPEVEEVAAPED
EEKEPVPQPPPSDDTRVENMDISDDEDGGALPSGSPEVLEEDEAELELQKQLEKGRRLRQ
LQQLRDSGEKVVEIVKKLESRQRGWEEEEDPERKGAIVFNATSEFCRTLGEIPTYGLAGN
REEQEELMDFERDEERSANGGSESDGEENIGWSTVNLDEEKQQQDFSASSTTILDEEPIV
NRGLAAALLLCQNKGLLETTVQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGF
TQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEA
LLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNANTITK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgttgtttcagctaccagctccaaaagtagctcaggagatgcctcatcgctt
agcattgaggagaccaataaactccgggcgaagttggggctgaaacccttggaggtcaat
gccgtcaagaaagaggcgggcaccaaggaggagcccgtggcggccgatgtcatcaacccc
atggccatacgacagcgagaagagctccgggagaagctagcagctgccaaggaaaagcgc
ctactgaatcaaaagttggggaagataaagacactgggggaagatgacccctggctggac
gatactgcagcctggatcgagaggagtcgacagcttcagaaggagaaggatttggcagag
aagagggcgaaactgctggaggagatggaccaagagtttggtgtcagcactctggtggag
gaggagtttgggcagaggcgacaggacctgtacagtgcccgggacctgcagggcctcact
gtggaacatgccattgattccttccgagaaggggagactgtgatccttaccctcaaggac
aaaggtgtgctgcaggaagaggaggatgtgctggtgaacgtgaacctggtcgataaggag
cgggcagagaagaatgtagagctgcgtaagaagaagcctgactacctgccctatgccgag
gacgagagtgtggatgacctggcacagcaaaaacctcgctctatcctggccaagtatgac
gaggagctggaaggcgagcggccacactcctttcgtctggagcaaggcggcaccgccgat
ggtctgcgggagcgggagctggaagagatcagggccaagctgcggctgcaggctcagtcc
ctgagctctgtggggccccgtgtggcctcagagtacctgacacctgaggagatggtgacc
tttaaaaagaccaagaggagggtgaagaaaatccgcaagaaggagaaggaagtgatcgtg
cgggcggacgacttgctgcctcttggagaccagactcaagacggggactttggttccaga
ctgcggggcaggggtcggcgccgagtgcctgaagtggaggaggtggcagccccagaggat
gaggagaaggagcctgtgccccagcccccgccatcagatgacacccgtgtggagaacatg
gacatcagtgacgatgaggacggaggagctctgccgtcgggatctccggaggtgctggag
gaggacgaggcggagctggagctgcagaagcagctggagaaggggcgtcggctgcggcag
ctgcagcagctgcgggacagcggggagaaggtggtggagattgtgaagaagttggagtct
cgccagcgaggctgggaggaggaggaggatcctgagcgaaagggggctatcgtgttcaac
gccacctccgagttctgccgcaccctaggggaaatccccacctatggtctggctggcaac
cgggaggagcaggaggaactcatggactttgaacgggacgaggagcgctctgccaatgga
ggctcggaatcggatggggaggagaacatcggctggagcaccgtcaacctggatgaggag
aagcagcagcaggacttctctgcctcctccaccaccatcctggatgaggagcccattgtg
aacagagggctggctgctgccctgctgctctgccagaacaaagggctgctggagaccaca
gtgcagaaggtagcccgggtgaaggcccccaacaagtcccttccctcagctgtgtattgc
atcgaggacaagatggccatcgatgacaagtacagccggcgggaggagtaccgaggcttc
acccaggacttcaaggagaaggacggctacaagcctgatgttaagatcgagtatgtggat
gagacgggccggaaactcacgcccaaggaggctttccggcagctgtcccaccgcttccat
gggaaaggctcgggcaagatgaagacagaacgacggatgaagaagctggatgaggaggcg
ctcctgaagaagatgagctccagtgacacgcccctgggcaccgtggctttgctccaagag
aagcagaaggcccagaagaccccatacattgtgctcagtggcagcggcaagagcatgaac
gcgaacaccatcaccaagtga
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