Marmota marmota marmota (Alpine marmot): 107156970
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Entry
107156970 CDS
T09644
Symbol
Rin1
Name
(RefSeq) ras and Rab interactor 1 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
107156970 (Rin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107156970 (Rin1)
Membrane trafficking [BR:
mmma04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107156970 (Rin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
RIN1
SH2
RA
TetR_C_28
Motif
Other DBs
NCBI-GeneID:
107156970
NCBI-ProteinID:
XP_015358635
Ensembl:
ENSMMMG00000021578
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MEDAGQPGTHPLRDPCRSFTPGHLEREKPAQDPLYDTPDSSRGQTGGPQQPARTVSLRER
LLLTRPVWLQLRANAAAALHVLRTEPPGTFLVRKSNTRQCQTLCVRLPEASGPSFVSSHY
IQESSEGVSLEGSDLMFPDLVQLICAYCHTRDILLLPLRLPRAIHQAATHKELEAISHLG
IEFWSSSLNTKAPQGPPEGPPLPRLKARSPQELDQGTGAALCFFNPLFPGDLGPTKRERF
KRSFKVRVSTETSSPLSPPAVPPPPVPVLPGADPSHTERLPPGRLLRRESSVGYRVPGGT
SHVLPLLPSLQEVDCGSPSSSEEEGPAGSRGSPMTSPGLGRRRPLLRSMSTAFCSLLAPE
RQVGRAAAVLMQDRHTAVGQLVQDLLTQVRASPEPQELQGIRQALSRARAMLSAELGPEK
LLPPERLEHILEKSLHRSVLKPLRPILAARLRRRFSADGSLGRLAEGLRVARVQGPGAFA
SHLSLPSPAETEQVRQKLLQLLRTYSPSAQVKRLLQACKLLYTALRTHVGEGAGADEFLP
LLSLVLAQCDLPDLLLEAEYMSELLEPALLTGEGGYYLTSLSASLTLLSSLGQAHTLPLN
PSQELQRSLSLWEQRRLPSTLHFQHLLRVAYQDPGSGCTSKTLAVPPGASIATLNQLCAT
KFRVSQPDVFGLFLYKEQNYHRLQPGALAHKLPTDGYLVYRRAERPGTPGTAAEEAGSGQ
PVSGSQNEEKGVQGDEDVEARASPRDTGGESETTAEGREG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgctgggcagccaggaacacaccctctcagagacccctgccggagcttcact
cccgggcacctggagagagaaaagccagcccaggacccgctgtacgacacaccagacagc
agccgggggcagacaggtgggccccagcagccggcgcgcactgtgagcctgcgggagcgc
ctgctgctcacccgacctgtgtggctgcagctacgggccaatgcagcagctgcactgcat
gtgctgaggaccgagcccccagggacattcctggtgcggaaatcgaacactcgccagtgc
cagactctgtgcgtgcgtctaccagaggccagtggcccctctttcgtctccagccactac
atccaggaaagctctgagggcgtatccttggagggctcggatctcatgttccccgacctt
gttcagctcatctgtgcctactgccacacccgagacattcttctcctcccgctccggctc
cccagagccatacaccaggcagccacccacaaggagctggaggctatctcccatctgggc
attgagttctggagttcctctctcaacaccaaagctccgcagggtccacctgaaggccca
cccctgcccaggctgaaggcccgatcccctcaggagctggaccagggcactggcgctgcc
ctctgcttcttcaaccccctgttcccaggagacctgggccccaccaagcgagagagattc
aagaggagcttcaaagtgcgggtgtccacagagacctctagtcctctgtcaccacctgct
gtgccacctcccccagtccctgtgctgcctggggctgaccccagtcacacagaaaggctg
ccccctgggcggcttctgagaagggagagctcagtggggtaccgtgtgcctggaggcacc
agccatgtcctcccactcctgccctccctccaggaggtggactgtggctctcccagcagc
tctgaggaagaggggccagctgggtccagggggagtcccatgacatcccctggccttggc
cgccgcaggcctctgctccggtccatgagcactgctttctgctccctgctggctcccgag
cggcaggtgggccgagcagctgcagtgttgatgcaggacagacacacagctgtgggccag
ttggtgcaggacctactgacccaggtgcgggccagcccggagccccaagagctgcagggc
atccgccaggcactgagccgggcccgggccatgctgagcgcagagctgggccctgagaag
ctgctaccgccagagaggctggaacacatcctggagaagtccctgcatcgctcagtgctc
aagcctctccggcccatcctggcagcccgcctgcggcgccggttttctgcagatggctcc
cttggccgcctggctgagggcctccgcgtggcccgagtgcaaggccctggagccttcgcg
tcccacctgagcctgccctccccggcggagaccgagcaggtgcgccagaagctgctgcag
ctgctccgcacctactcacccagtgcccaggtgaagcggctcttgcaggcctgcaagttg
ctctacacggccctgaggacccacgtgggggagggcgcaggcgcagatgagttcctgcct
ctgctgagccttgtcttggcccagtgtgaccttcctgacctcctgctagaagccgagtac
atgtcggagctgctggagccagctctgctcactggagagggtggctactaccttaccagc
ctgtcggccagtctgaccctgctgagcagcctaggccaggcccacaccctccccctcaac
ccctcccaggagctgcagcgctccctgagcctctgggagcagcgccgcctgccttccacc
ctccacttccagcacctccttcgagtagcctaccaggatcctggcagcggttgtacctcc
aagactctagctgtgcctcctggggcctcaattgccaccctgaaccagctctgtgccact
aagtttcgagtcagccagccagatgtttttggcctattcctgtacaaggagcagaactac
caccgcctgcagcctggagccctggcccacaagcttcccacagatggctatctggtctac
cgccgggcagagcggcctgggaccccagggactgcagcagaggaggcaggcagtgggcag
ccagtgtcaggtagccagaatgaggagaagggggtacagggagatgaggatgtggaagcc
agagccagccccagggacactgggggagagtcagagacaactgctgagggaagagagggt
tag
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