Marmota marmota marmota (Alpine marmot): 107157190
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Entry
107157190 CDS
T09644
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03440
Homologous recombination
mmma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107157190 (Top3a)
03460 Fanconi anemia pathway
107157190 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmma03032
]
107157190 (Top3a)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107157190 (Top3a)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
107157190 (Top3a)
DNA replication proteins [BR:
mmma03032
]
Eukaryotic type
DNA Topoisomerases
107157190 (Top3a)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107157190 (Top3a)
FA (Fanconi anemia) pathway
107157190 (Top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
107157190
NCBI-ProteinID:
XP_015358995
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MIFPLTRYVFRWLRQSTCRDLSRSAMEVAFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
REGLSKFNKIYEFDYHLYGQSVTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFIDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPGLQVLRARFSE
ITPRAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGTVEFNWKRHRLFNHTACLVLY
QLCMEDPLATVVEIRSKPKSKWRPQALDTVELEKLASRKLKINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLMALVEQQTPDPHWGAFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTSNLQGDERRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDV
YPYDHWSDKLLPVYEQGSRFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFVVLRQQVQKYKQVFIEAVAKAKKLDEALSQYFGEGAEVAQQEEIYPAMPEPIQKCPQ
CNRDMVLKTKKSGGFYLSCTGFPECRSAIWFPDSVLEASRDGSVCSVCQPPPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLKEIMGLRFSRGPPRASQPASQPSGYLQASQSLNRMD
ASQHSQPQPPASRQTITSKALIQTLPPPAATGENNSITCNCGQEAVLLTVRKEGPNRGRQ
FYKCSSNSCNFFLWADSSHVGEGEAPTSSSRPPGSSLGRPPGSLGGFSRPGSGSGSDSGS
GGSGNTSCLCNQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWTDENVAPGEAGTFA
ALPWPRGRGRTQGSEARSRRPRAGSSDTGSTAKRPRKCSLCHQPGHTRPFCPQNR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccgctcacccgatacgtgttccgttggctgcgacagtctacatgccgtgac
ttgtcccgctccgccatggaagttgccttccgaggcgtgcggaaagtcctctgtgtggcc
gagaaaaatgacgcggccaagggtatcgcggacctgctgtccaacggtcgcatgaggcgg
agagaaggactttctaaattcaacaagatctatgaatttgactatcatctctatggacag
agtgttaccatggtgatgacttcagtttctgggcatttactggctcatgatttccagatg
cagtttcgaaaatggcagagctgcaaccccctagtcctctttgaagctgaaattgaaaag
tactgcccagagaattttatagacatcaagaaaactctagaacgagaaacgcggcagtgt
caggccttagtgatctggactgactgtgacagagaaggtgaaaacattgggtttgagatt
atccatgtgtgcaaggctgtgaagcctggtctacaagtgttgagagcccgtttttctgag
atcacaccacgtgctgtcaggacagcctgtgaaaacctgactgagcctgatcaaagagtc
agtgatgctgtggatgtgaggcaggagctggacctaaggatcggagctgccttcactaga
ttccagaccctgcggcttcagaagatttttcctgaggtgctggcagagcagctcattagc
tatggcagctgccagttcccgacactggggttcgtggtagaaaggttcaaagccattcag
gcttttgtgccagaaatcttccacaggattaaagtaactcatgatcacaaagatggtacc
gtagaattcaactggaaaagacatcgtctgtttaatcacacagcttgtcttgtcctctat
caattatgtatggaggatcccctggcaactgtggtggagatcaggtctaagccaaagagc
aagtggaggcctcaagcattggacactgtggagctggagaagctggcttctcgcaagttg
aaaataaatgctaaggaaaccatgaggattgctgaaaagctctacactcaagggtacatc
agctatccccgaacagaaacaaatattttccccaaagacctaaacttgatggcactggtg
gaacagcagaccccagatccacactggggggcctttgcccagagcattctcgagcggggt
ggccccaccccacgcaacggaaacaagtctgatcaagctcaccctcccatccatcccacc
aagtacaccagcaacttgcagggagatgaacggcgactatatgagttcatcgtccgtcat
tttctagcctgctgttcccaagatgctcaggggcaagagactactgtggagattgacatt
gctcaggaacgctttgtggcccatggtctcatgattctggcccgaaactacctggacgtg
tatccctatgatcactggagtgacaagctcctccctgtctatgagcaaggctctcgcttc
cagcccagcactgtggaaatggtggatggggagaccagcccaccacaactgctcactgag
gctgacctcatcgccctcatggagaagcatggcattggtactgatgcaactcacgcagag
cacatcgagaccatcaaagctcggatgtatgttgggctcacctcagacaagcggtttctc
ccagggcacctgggcatgggacttgtggaaggttatgattctatgggctatgaaatgtcc
aagccagacctccgggccgagctggaagctgatctgaagctgatctgtgagggaaagaag
gacaaatttgtggttctaaggcagcaggtgcagaaatacaagcaggttttcattgaagca
gtggctaaggcaaagaaattggatgaggccttgtcccaatactttggggaaggggcagaa
gtggcccagcaagaagagatctacccagccatgccagagcccatccagaagtgcccacag
tgcaacagggacatggtcctcaagaccaagaagagtggcgggttctacctcagctgcacg
ggtttcccagagtgtcgatcagctatatggtttcctgactctgtgctagaggctagcaga
gacgggagtgtatgttcagtttgtcagccaccccctgtgtacaggttgaagttaaagttc
aagcgtggcagtcttcccccaaccatgccccttgagtttgttggctgtattggtggatgt
gatgaaaccctaaaggagatcatgggcctgagattttcacgggggccccccagagctagc
cagcctgccagccagccctctggctacctgcaggcaagccagtccctgaacaggatggac
gccagccagcacagccagccgcagcctcctgccagcagacagactataacctcaaaggct
ctaatccagactctcccaccacctgcagcaacaggtgaaaacaactccatcacctgcaac
tgcggccaagaagctgtgctgctcactgtccgaaaggagggccccaatcgaggccggcaa
ttctataaatgcagcagcaacagctgcaacttcttcctgtgggctgacagcagccatgtt
ggagaaggagaggctcctacctctagttcaaggcccccaggcagctcactgggacgccca
ccaggctcactgggtgggttcagcagaccaggcagtggcagtggcagtgacagtggcagt
ggcggcagtggcaacacatcctgcctatgcaaccagcctgctgtcacacggactgtgcaa
aaggatggacccaacaaaggacgccagttccatacatgtgccaagccaagagaacagcaa
tgtggcttctttcagtggactgatgagaatgtggccccaggggaggcagggacttttgca
gcactaccctggccaagaggcagaggaagaacgcagggatcagaagctaggagcagaaga
ccccgagctggctcctcagacacagggtccacggcaaagagaccccggaaatgcagtctt
tgccatcagccaggacacacccggcctttctgtcctcagaacagatga
DBGET
integrated database retrieval system
