Marmota marmota marmota (Alpine marmot): 107157721
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Entry
107157721 CDS
T09644
Symbol
Eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma03015
mRNA surveillance pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107157721 (Eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
107157721 (Eif4a3)
03015 mRNA surveillance pathway
107157721 (Eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107157721 (Eif4a3)
03041 Spliceosome [BR:
mmma03041
]
107157721 (Eif4a3)
03009 Ribosome biogenesis [BR:
mmma03009
]
107157721 (Eif4a3)
03012 Translation factors [BR:
mmma03012
]
107157721 (Eif4a3)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107157721 (Eif4a3)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107157721 (Eif4a3)
mRNA cycle factors
Stress granule specific factors
107157721 (Eif4a3)
Spliceosome [BR:
mmma03041
]
Complex C
Other components
EJC/TREX
107157721 (Eif4a3)
Ribosome biogenesis [BR:
mmma03009
]
Eukaryotic type
90S particles
Helicases
107157721 (Eif4a3)
Translation factors [BR:
mmma03012
]
Eukaryotic type
Initiation factors
eIF-4
107157721 (Eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
107157721
NCBI-ProteinID:
XP_015359577
Ensembl:
ENSMMMG00000007309
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MFTGALPRSPGEKPRRRVLRRPAGAWADPSPGWARRGVPPGVVISAGLHDRHIQHTRNLA
EGRSLGALGAPGALHTRGPRQRELGLPSRRPGMGTAPASWAAAGAPHPPGPPADPLAAAT
SRRGTLARSASKARGHSDPESLGCFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFS
ISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKL
DYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ
VVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD
TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLIS
TDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIE
QYYSTQIDEMPMNVADLI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccggcgcgctcccaagaagccctggagagaagccgcggaggagagtgctgcgc
cggcccgcgggggcctgggcggatcccagccccgggtgggcgcgccggggcgtcccgcct
ggggtcgtcatctctgcgggactgcacgaccggcacatccagcacacccggaacctcgca
gaggggcggtcactaggggcgctgggggctcccggcgccctccacacccggggcccgcgg
cagcgggaactaggcctcccgagccgacggcccggaatggggactgctcccgcctcctgg
gcagcggcgggcgcgccccaccctcctggaccgccagcagacccgctcgcggccgccacg
tcccgcagaggcaccctcgctcgctccgcctccaaagcccggggccactcagaccccgag
tcgctcggctgttttgaaaaaccatcagcaatccaacagcgagctatcaagcagataatt
aaagggagagacgtcattgcacagtcccaatctggtacaggcaagacagccaccttcagt
atttcagtcctccagtgtttagacatacaggttcgagaaacccaggctttgatcttggct
ccaacaagagagttagctgtacagattcaaaagggcctgctcgctctgggagactacatg
aatgtccagtgccatgcctgtattgggggcaccaacgttggggaggacatccggaagctg
gactatgggcagcatgttgtcgctggcactccagggcgtgtctttgatatgattcgtcgc
agaagtttaaggactcgggcaatcaagatgctggttttggatgaggctgatgagatgttg
aataaaggtttcaaagagcagatttacgatgtgtaccggtacctgcccccagccacacag
gtggtcctcatcagcgccactctgcctcacgagatcctggaaatgaccaacaagttcatg
acagaccccatccgtatcctggtgaagcgtgatgaactgaccctggaaggcatcaaacag
tttttcgtggcagtggaaagagaagagtggaagtttgacaccttgtgtgacctctatgac
actctgaccatcactcaggcggtcatcttctgtaacaccaagaggaaggttgactggctg
acagagaaaatgagagaagccaatttcaccgtgtcctcgatgcacggagacatgcctcag
aaggagcgggagtccatcatgaaggaattccggtctggtgccagccgagtgctcatttcc
acagacgtctgggcccgggggctggatgtcccccaggtgtccctcatcatcaactatgac
ctgcccaacaacagagaactgtacatacacagaattgggagatcgggtcgatatggcagg
aagggtgtggccatcaattttgtgaagaatgacgacatccgcatcctcagagacatcgag
cagtactattccactcagattgacgaaatgcctatgaatgttgctgacctgatctga
DBGET
integrated database retrieval system
