Marmota marmota marmota (Alpine marmot): 107157793
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Entry
107157793 CDS
T09644
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107157793 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107157793 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107157793 (Nup85)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107157793 (Nup85)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107157793 (Nup85)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107157793 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
TPR_16
Motif
Other DBs
NCBI-GeneID:
107157793
NCBI-ProteinID:
XP_015359692
Ensembl:
ENSMMMG00000010923
UniProt:
A0A8C5ZAT3
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MEELDGEPTVTLIPGMNSKKKQMCFDWGPGEMLVCETSFNKKEKSETAPNCPFIYIIRKD
VDVYSQILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQFA
IAAKDPASGHQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSENPSKHESFWNLVTVLVLQGRLDEARQMLSKEADASPTSAGMCRILGDLMRTM
PILSPGNTQTLTELELKWQHWREECERHLQDGTFASSPRLESLCKIMLGDEAALLEQKEL
LSNWYHFLVTRLLYSHPTVKPIDLHFYAQSSLDMFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCRLLQAHNLYFGSNMREFLLLEYASGLFAHHSLWQLG
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCEQGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLTSGKPERAEPDAQRLQDEDIETTKVEMLRLALARNLARAIIREGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggacggcgagccgacagtcactttgattccaggtatgaattccaagaag
aagcaaatgtgttttgactggggtcctggggagatgttggtgtgcgaaacctccttcaac
aaaaaagaaaaatcagagacagccccaaactgtccctttatctatatcatccggaaagat
gtagatgtttactctcaaattttgagaaaactctttaatgaatcccatggaatctttgtg
ggtctccagagaattgaagaagaattgactggaaagtccagaaaagctcaattggttcga
gtgagtaaaaactatcgatcagtaataagagcctgtatggaggaaatgcaccaatttgca
attgctgcaaaggatccagccagtggtcaccagttcagcagccaggtctccattttgtca
gcaatggagctcatatggaacctgtgtgagattctttttattgaagtggccccagctggc
cctctcctcctccatctcctcgactgggtccgactccatgtgtgcgaagtggacagtttg
tcagcagacgttctgggcagtgagaatccaagcaaacacgagagcttttggaacttggtg
accgtcttggtgcttcagggtcggctagatgaggcccgacagatgctgtccaaggaggca
gatgccagccccacctctgcaggcatgtgtcgaatcctgggggacctgatgaggacaatg
cctattctcagtcctggcaacactcagacactgactgagctggagctgaagtggcagcac
tggcgagaggagtgtgagcggcacctgcaggatggcacgtttgcctccagcccacgccta
gagtctctctgcaagatcatgctgggagatgaggccgccttgttagagcagaaggaactt
ctgagtaattggtaccatttcctagtcactcggcttctgtactctcatcccacagtgaaa
cccattgatctgcacttctatgcccagtccagcctggacatgtttctgggaggtgagagc
agcccagagcccctggacaacatcttgatggcggcctttgagtttgacatccaccaagtg
atcaaggaatgcagcattgccttgagcaactggtggtttgtggcccacctgacagacctg
ctggatcactgcaggcttctccaggcacacaacctctattttggttccaacatgagagaa
ttcctcctattggaatatgcctcaggactgtttgctcatcacagcctttggcagctaggg
gtagattactttgactactgtcctgaactgggccgagtttctttggagctgcacattgag
agaatccctctcaacacagagcagaaagccctcaaggtgctacgaatttgtgagcagcgg
cagatgactgaacaggtccgcagcatctgtaagatcttggctatgaaggctgtccgcaac
aaccgcctgggctctgccctctcttggagcatccgtgccaaagatgccgcctttgccaca
cttgtgtcagacagattcctcagggattactgtgagcaaggttgcttttccgacttggat
ctcattgacaacttggggccagccatgatgcttagtgatcggctaacattcctgggaaaa
taccgtgagttccaccgattatatggagagaagcgctttggggatgctgcatctctcctg
ttgtctctgatgacttcccagattgcgccccgctctttctggatgactctgctcacagat
gccctgccccttttggaacagaaacaggtgattttctcagcagaacaaacatacgagctg
atgcgatgtctggaggacttgacctcagggaagccagagcgtgcagagcctgatgcccag
cgactacaggacgaggatatagaaaccactaaggtggaaatgctgagacttgctctggcc
cggaatcttgctcgggcaattataagagaaggctcattggaaggttcttga
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