Marmota marmota marmota (Alpine marmot): 107157950
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Entry
107157950 CDS
T09644
Symbol
Tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmma03016
]
107157950 (Tarbp1)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107157950 (Tarbp1)
Enzymes [BR:
mmma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
107157950 (Tarbp1)
Transfer RNA biogenesis [BR:
mmma03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107157950 (Tarbp1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107157950 (Tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
107157950
NCBI-ProteinID:
XP_048656339
Ensembl:
ENSMMMG00000015900
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
METLEGNQSPCEMSVHLCTKHCLWIKVENDSGAEESWTSRIHVIKPVLPKLNNLFEYAVS
EENGCWLFHPSWHMCVYKRMFESENKILTKEGVLHFLELYESECLPFSPDFSEFIIGPLM
DALSESSLYGRSPGQLVGSGSPLGLKLQKFLVTYVSLLPEEIKSGFLLRFLQKMTSRHWC
AVPVLFLSRALASVPRCKALGVEGLLALRDVLRCTMVTHQVLLRGAAQCYLLQAALRLVD
VEQVSLGDVSALLVSLRQEESLGRGTMLWAELCDWLRGNERYFRQPSASGSQGLQEASLT
TYVKNLIQEYVRSPAWEAGEGSLVPDGLEARLTATMVLLAVDVEAKKAQNSGKQRTQNVL
GLFLDPLLGALVKFSTNAYVPVPKTDRCLQLLLTLLHTCMLRGSGAQEDEVSILLQSLLM
SASESVSEFILRRLTMDELRTVSDLDRCHLYLMVLTELIHLQLKLGWKAGAPICRVISPL
KNACIRHLQETDSGQEPTLARQIQRVTSMATLARVCEAIDLQPALQRESLNTGPLERFLS
TLPLNQTLQKPCAEDPESSSFFEESSSCQGWGKIVAQYVHDQWVCLSFLLRRCHPLEPAA
EEDKLEPSLPSVRTPAQTLCAALDALSILPSDRVSPVFCCMKALVPQLLTSSESLCVESF
DVAWRVLTSLSNTQLTFWPNLRAFVQFVFDDTILATAAKTKGQAYFRIKEIMYKIIEMSA
VKTGVFNTLMSHCCRSWLASARDPQGSLSSARHYSELILEACTFGTVFRRDQRLIQDVQA
FIESLGHDCATNVVMESTKREDCYVRVCAIKFLCLLDGSNTAHKSFMEDLAIKLLDKDKQ
VNQSRARYYQNSLQHRVKNRIWQVLLTLFPRFDQNFLNEIIDKIFQAGFANNQASIKYFI
EWIIILILYKFPQFLPKFWDCFSYGEEKLKTSICTFLSVLSHLDIIIQNIPEKRQVLKQA
LLVALQWGLSHNFSIRLYALVALKKVWAVCKALYMEECDAWTALIECSLSQAESVHGTGN
AKKNWQRIQDHFFFATFHPLEDYCLETIFYTLPRLSGVIEEEWITLGRFSSFTDIPSGSG
PLWCFSRTLLCELNPGDWSQQDAGTGSGEADGPSEQADVQKKIIPWGHDLLDADLELALQ
DRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVSNLHCVHDKQFQHLSVS
AEQWLPLVEVKPHQLPGYLQQKRAAGYTVIGVEQTAHSSDLVQFCFPEKSLLLLGNEREG
IPANLLRQLDVCVEIPQQGVIRSLNVHVSGALLIWEYTRQQLLRRAGAPS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctagaaggaaatcagagtccctgtgagatgtcagtccacctgtgcaccaag
cattgtttgtggatcaaagtggagaatgactcgggtgctgaagagagctggacatccagg
atacatgttataaagccagtcttaccaaagctaaacaatctgtttgaatatgcagtgtca
gaggaaaatggctgctggctctttcacccctcctggcacatgtgtgtttataaaagaatg
tttgaaagtgagaataaaatcctgaccaaagaaggtgttctccactttctggagctgtat
gaatctgagtgtcttccattttcaccagacttttctgagtttattattggaccattaatg
gatgccctttcagagagctctctctatggcaggtccccaggccagctggtaggaagtggt
tctccattgggattaaagttacagaagtttttagtcacttatgtttctcttcttccagaa
gaaataaagagtggctttctgctcaggttccttcagaagatgacaagcaggcactggtgt
gcggttcctgtgctctttctgtccagggctctggcgagtgtcccacggtgcaaggccctg
ggcgtggaagggctgttggccctcagggacgttcttcggtgcaccatggtcacacaccag
gtcctgctgcggggtgcggcacagtgctatttacttcaggcggccctgcgtttggtggac
gtggagcaagtgtcccttggcgacgtctctgcgctcctcgtgtctctgagacaggaggag
tccttaggacgaggaactatgctgtgggcagagctctgcgactggctgcgtgggaacgag
cggtacttcaggcagccctctgccagtggctcccagggcctacaggaggcatccttgacc
acatatgtgaagaacctcatccaggagtatgtgaggtcccctgcctgggaagcaggagaa
ggcagcctcgtgcctgatgggctggaggcccggctgacggctacaatggtcttgctggca
gtggatgtggaagcaaagaaggcccaaaacagtggaaagcaaaggacacagaatgtgttg
gggctgttcttggatcccctgctgggagccctggtgaagttcagtacgaacgcctacgtg
ccggtgccgaagaccgaccggtgtctgcagctgctgctgacgttgttgcacacatgcatg
ttgagaggctccggcgcccaggaggatgaggtgtccatacttctgcagagcctcctcatg
tccgcctcagagagtgtgtccgagttcattctcaggagactcaccatggacgagctccgc
accgtttcagatctcgaccgttgccacttgtacctgatggtcttaactgagctcatacat
ctccagctgaagttggggtggaaagcgggtgcccctatctgcagagttatttctcctttg
aagaacgcatgcattcggcaccttcaggagaccgatagtggacaggagcccacacttgct
cgtcagatccagagagtgactagcatggccaccttggccagggtgtgtgaggcaattgat
ctgcagcctgccctgcagcgggagtccctgaacacggggcccctggaaaggttcctttcc
actcttccacttaaccaaactctgcagaagccctgtgcagaggacccggagagcagcagt
ttttttgaggagtcatcgtcttgccaaggatgggggaagattgtagcccagtatgtccac
gatcagtgggtctgcctctctttcttgttgagacggtgccacccccttgagccagccgca
gaagaggacaagctggagccctcactgccctctgtgcgtacaccagcacagaccctgtgt
gctgcactggatgccctctccattctgccctctgaccgggtctcaccagtgttctgctgc
atgaaggctctggtcccccagctgctgacctcatctgagtcgctctgtgtggagtctttc
gacgtggcctggagagtcctgacctccttgagcaacacccagctgacgttctggcccaac
ttgagagctttcgttcagtttgtttttgatgataccattctcgccaccgctgcgaaaacc
aagggccaggcatatttcaggataaaagagattatgtacaagatcattgaaatgtctgct
gtaaaaactggggtcttcaatacactgatgagtcactgctgccggtcatggctggcgtct
gccagagacccccaggggtctctttccagcgccaggcactacagcgaactcatcctagag
gcgtgtacgtttggaactgtgttcagacgtgatcagagacttattcaggatgtacaggcc
ttcatagagagtctgggacatgactgtgcaaccaatgttgtcatggagagtactaaaagg
gaagactgttatgtgagggtctgtgccatcaaattcctgtgtctgttagacggctcgaac
acggcccacaagtcattcatggaggatcttgcaatcaagctgttggacaaagacaagcag
gtgaaccagtctagagcccgctactaccagaattctctccagcaccgggtgaagaatcgg
atatggcaggtgctgctcacgctcttccccaggtttgaccagaacttcttgaatgagatt
attgacaagattttccaagctggttttgccaacaatcaagcatccataaaatattttata
gaatggattattatattgattctctataagttccctcagtttcttccaaagttctgggat
tgtttttcctatggtgaagaaaaacttaaaacaagcatttgtacatttttatctgttctg
tcacatttggacattatcattcaaaatattccagaaaagaggcaggtgctgaagcaggcc
ctcctcgtcgctctgcagtggggtctcagccacaacttcagcatccggctgtacgctctg
gtggctctgaagaaggtctgggcagtgtgcaaagccctctacatggaggagtgtgatgcg
tggacggctctcattgagtgtagtcttagccaggcggaaagcgtgcacggcacagggaat
gccaagaagaactggcagcgcatccaggaccacttcttcttcgccacgtttcacccccta
gaggattactgtctggagaccatcttttataccctcccacggctctcgggtgtcattgaa
gaggagtggatcacccttggcagattttccagcttcacagatatcccttcaggttcaggg
cccctgtggtgcttttctcggactctgctctgtgagctaaatcccggggactggtcccag
caggacgcaggcactggctcgggggaagcagacggcccttctgagcaggctgacgtgcag
aagaaaatcatcccatggggacacgacctcctcgacgcagacctggagcttgcgctccag
gaccgtgccgccaaacttggaaagtccatcagcagactgattgtagtggcctcgctcatt
gataaaccaactaatttaggagggctgtgccggacctgtgaggtgttcggggcgtcagtg
ctggtggtcagcaatcttcattgtgtccatgacaagcagtttcagcacctcagtgtctca
gctgaacagtggcttcccctggtggaggtgaagccgcatcagcttcctggttatctgcaa
cagaaaagggcagcaggttacacggtcattggagtggagcagactgcccacagctcggac
ttggtccagttctgcttccctgagaagtcgctgctcctgttgggcaatgaacgtgaaggc
attcctgccaacctgctgcggcagctggatgtgtgtgtggagattccccagcagggcgtc
atccgctcactgaatgtgcacgtgagtggggccctgctgatctgggagtacaccaggcag
cagctgctcaggcgtgcaggagccccatcgtga
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integrated database retrieval system
