KEGG   Marmota marmota marmota (Alpine marmot): 107158022
Entry
107158022         CDS       T09644                                 
Symbol
Per1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04710  Circadian rhythm
mmma04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    107158022 (Per1)
   04713 Circadian entrainment
    107158022 (Per1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107158022 (Per1)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107158022 (Per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 107158022
NCBI-ProteinID: XP_015359939
Ensembl: ENSMMMG00000020158
LinkDB
Position
Unknown
AA seq 1301 aa
MSDPPEEADGGRDPRPGESFCPGGVPSPGPPQHRPCPGPNLADDTDANSNGSSGNESNGH
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGV
LLRCKRDVFRGARFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGVKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTGPLNEDVFTPPAPSPTL
SLDSDIQELSEQIHRLLLQPVHSSSPTGLCGVGPLMSPGPLHSPGSSSDSNGGDAEGPGP
PVPVTFQQICKDVHLVKHQGQQLFIESRARPPPQPRLPATGTFKTKALPCQSPDPELEAA
PALTQAPPPLVPEEAERKEASSCSYQQINCLDSILRYLESCNIPSTTKRKCTSSSSYTAS
SASDDDKQRTGPVPIGAKKDPSSAVLSGEGAAPRKEPVVGSTLSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEELPGLAPGPTPSPAPSPTVAPDPAPDAYRPVGLTK
AVLSLHTQKEEQAFLNRFRDLGRLRGLDNSSTAPSAPGERGCHHGPAPPSRRHHCRSKAK
RSRHHQTPRAEAPCYVSHPSPVPPSGPWPPPPATTPFPAVVQPYPLPVFSPRESPQPLPP
APTSVPSATFPTPLVTPMVALVLPNYLFPTTSSYPFGVPQTPAEGPPTPASHSPSPSLPP
LPPSPPRRPDSPLFNSRCSSPLQLNLLQLEEPPRPEGGTVAGGPGSNAGLPPPSEEAAEP
EARLVEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGS
TSASITRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPIWLLMANADQR
VMMTYQVPSRDMASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVM
ACVDCGSSSQDPGHSDDPLFSELDGLGLEPMEEGGGEGGSSGGGGDGDGGIGEGGIGEGG
EEAQAQVEAKVSSSQDSAMEEEEQGGSSSSPALCAAENGTS
NT seq 3906 nt   +upstreamnt  +downstreamnt
atgagtgatcccccagaagaggctgatgggggaagggaccccaggcccggcgaatccttt
tgtcctgggggagtcccatcccctggacccccacagcaccggccttgcccaggccccaat
ctggctgatgacactgatgccaatagcaatggctcaagtggcaatgagtccaatgggcat
gaatccaggggtgcatctcaacggagttcacatagctcctcctctggcaatggcaaggac
tcggcccttctggagaccactgagagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcctgagtgccagctcagagcaggacaacccatct
accagtggctgcagcagtgaacagtcagctagggcaaggactcagaaggaactcatgaca
gcacttcgggagctcaagcttcgactgccaccagagcgtcggggtaaaggccgttctggg
accctggccacactacagtatgcactggcttgtgtcaagcaggtgcaggccaaccaggaa
tactaccagcagtggagcctggaggagggtgagccatgtgccatggatatgtccacttac
accctggaggagctggagcacatcacatctgagtatacacttcgcaaccaggataccttc
tcggtggctgtctccttcctgacaggccgaattgtatacatttcggagcaggcaggagtt
ctgctgcgttgcaagcgggatgtatttcggggtgcccgcttctcagagctcctggctccc
caggatgtgggtgtcttctatggctccacggccccatctcgtctacccacttggggcact
ggggcctctgcaggttcaggcgtcaaggattttacccaggagaagtctgttttctgccgt
atcagaggaggtcctgacagagatccagggcctcggtatcaaccattccgcctaactcca
tatgtgaccaagatccgggtctcagatggggcccctgcacagccgtgctgcttgctcatt
gcagaacgcatccactcgggttatgaagctccccgtatcccccctgacaagaggattttc
accacgcgtcacacaccaagctgcctcttccaggatgtggatgaaagggctgctccgctg
ctgggctacctaccccaggacctcctgggggcaccagtgcttttgttcctgcatcctgag
gacagaccactcatgctggccatccataagaagatcctacagctggcaggccaacccttt
gaccactcccctattcgcttctgtgcccgtaatggggagtacgtcaccatggacaccagc
tgggctggcttcgtgcacccctggagccgtaaggtggcctttgtgttgggccgccacaaa
gtacgcacgggacccctgaatgaggatgtgttcactcctccggctcccagtccaactctg
tccttggactctgatatccaggagctctcagagcagatccatcggctactgttgcagccc
gtgcacagctccagccccacaggactctgtggagttggccccttgatgtccccaggccct
ctccacagccctggctcctccagtgatagcaacggcggtgatgctgaggggcctggacca
cctgttccagtgactttccagcagatctgtaaggatgtgcatctggtgaagcaccagggg
cagcagcttttcattgagtcccgggcccggcctccaccccagcctcgcctccctgctaca
ggcacattcaagaccaaggcccttccttgccagtccccagacccagagctggaggcagcc
cctgctctgacccaggctccaccacccttggtccctgaggaggctgagaggaaagaagcc
tccagctgttcctaccagcaaatcaactgcctggacagcatcctcaggtacctggaaagc
tgcaacatccccagcacaaccaagcgtaaatgcacttcctcctcctcctatactgcctcc
tcagcctctgatgatgacaagcagaggacaggtccagtccccataggggccaagaaagat
ccatcatcagcagtgctgtctggggagggggccgctccacggaaggagccagtggtggga
agcaccttgagcccgctcgccctggccaataaggcggagagcgtggtgtccgtgaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggaactgcctggcctagctccaggcccaacccccagcccggccccc
agccccacagtagcccctgacccagccccagatgcctaccgcccagtgggcctgaccaag
gccgtgctgtccctgcacacacagaaggaagagcaagccttcctcaaccgcttccgagac
cttggcaggctgcgtggacttgacaactcttccacggccccctcggcccctggcgagcga
ggctgccaccatggcccagcaccccccagccgccgacaccactgccgatccaaagccaag
cgctcacgccaccaccagaccccacgggccgaagccccctgctatgtctcccacccctca
cctgtgcccccctctggcccctggccccctcctccagccaccactcccttcccagcagtg
gtccagccttacccactcccagtgttctccccacgggaaagtccccagcctcttcctcct
gctcccacatctgtgccctctgccactttccctacccccttagtaactccaatggtggcc
ttggtgctccctaactatctgttcccgactacatctagctatccctttggggtacctcag
acaccagctgaggggcctcccacccctgcctcccactcaccctccccatccctgccccca
cttcctcccagtcccccacgccgcccagactccccactgttcaactcaagatgcagttcc
ccactccagctcaatctgctgcaacttgaggagcccccccgtcctgaggggggcactgtt
gcagggggtcctgggagcaatgctgggctcccacctcctagtgaggaggccgctgagcct
gaagccagattggtggaggtaactgaatcctccaatcaggatgcactctctggctccagt
gatctgttggaactgctactgcaagaggactcgcgttctggtacaggctctgcagcctca
ggctcccttggctctggcttgggctctggatcaggttcaggctcccatgagggtggcagc
acctcagccagcatcacccgcagcagtcagagcagccacacgagcaagtacttcggcagc
attgactcttcggaagctgaagctggagctgctcaggccagggctgagcctggggaccag
gtcattaagtatgtgctccaggatcccatctggctgcttatggccaatgctgaccaacgt
gttatgatgacctaccaggtgccctccagggacatggcatctgtgctaaagcaggaccga
gagcggctccgagccatgcagaagcagcagcctcggttctcagaggaccagcggcgggaa
ctgggtgctgtgcactcctgggtccgcaagggacagttgcctcgggcccttgatgtgatg
gcctgtgtggactgtggtagcagctcccaagaccctggccactctgatgacccacttttc
tcggagctggacggactggggctggagcccatggaggagggtggaggcgagggtggcagc
agtggtggtggtggtgatggtgatggtggcattggtgagggtggcattggtgagggtggc
gaggaggcccaggcccaagttgaggccaaggtctcaagctctcaggactctgccatggag
gaggaggaacaaggtgggagctcgtccagtccagccttatgtgcagcagaaaatggcacc
agctaa

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