Marmota marmota marmota (Alpine marmot): 107158123
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Entry
107158123 CDS
T09644
Symbol
Zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X4
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107158123 (Zswim8)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
107158123 (Zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
107158123
NCBI-ProteinID:
XP_015360062
Ensembl:
ENSMMMG00000023458
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLA
NGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRVTSCS
CTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQI
LPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKKTLHKFCG
PSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKRRDSNAAP
LLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVTLW
RLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVEACYFNWE
EAYPLPGVTYSGTDRKLALCWARALPPRPGVSRSGGLEESRDRPRPLPTELAVRPKEPGP
KRKGLGEGVPSSQRGPRRLSAEGGDKSLHKLGSGGGKAKALGGAGSGGKGSAGSGSKRRL
SSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFLESPPPCPTPGVSRGPSTFLPEPPDTY
EEDGGVYFSEGPELPTASAGPPSLLPGEVCTRDDLPSTDESGNGLPKTKEAAPAIGEEDD
DYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEALHAHGYSS
EASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFLLTVLSER
PEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMSTMRCRAE
ELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWSNELPGDEELGFEAAVA
ALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRESQTHKPQ
TLSSFYSSSRPATANQRSPSKHGGPSAPGALQPLTSGSAGPAQPGNVAGAGPGPAEGFTE
KNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMA
SIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRAS
ASGGARTKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFT
HPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAA
LTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALV
QCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAREGATSCS
ATGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHS
PGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYP
YSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVALSSVHPASTFPAIQGASLP
ALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALEMLGRRAHNDHPNNF
SRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIVMETLQRLSPAHAHN
HLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFND
ILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgagagatggactggtaatcccattggtggagctatcagcaaagcaggtggcatttcac
atcccgtttgaagtggtggagaaagtttaccctccagtgcctgagcaactccagctccga
attgctttttggagcttccctgagaatgaagaggacattcgactgtattcgtgcttggcc
aatggcagtgcagatgagttccagcgaggggatcagctgttccgcatgagggctgtaaag
gatccactgcagataggattccacctgagtgctacagtggtgccacctcagatggttcct
ccaaagggggcctacaacgtggctgtgatgtttgaccgctgccgggtcacttcctgcagc
tgtacctgtggggctggggccaaatggtgtactcacgtcgtggcactctgtctcttccgc
atccacaacgcttctgcagtctgcctgcgtgccccagtctcagagtccctatctagactg
cagagggaccagctgcagaagtttgctcagtatctcatcagtgagctccctcagcagatc
ctccctacagctcagcgtctcctggatgaactcctctcctcccagtcaacagccattaat
acagtgtgtggagccccagatcccacagcagggccctcagcttcggaccagagcacttgg
tatttggatgagtcaacactgaccgacaatatcaagaagacgttgcacaagttctgtggt
ccctctcctgtggtcttcagtgatgtgaactccatgtatctgtcttccacggagcctcca
gctgctgctgaatgggcatgtctgctgcgccctctgagaggtcgtgagccagagggcgtc
tggaacctgcttagcattgtgcgggagatgttcaagcggagggatagcaatgctgccccc
ttgctggaaatccttactgaccagtgcctcacctacgaacagataacaggttggtggtac
agtgtgcgtacctcagcctcacacagcagtgccagtggacacacaggccgtagcaatggg
cagtcagaagtggcagctcatgcatgtgccagcatgtgtgacgagatggtcacactatgg
agactggctgtgctggaccctgccctcagcccccagcgccgccgggaactgtgtgcacag
ttgcgccagtggcaactgaaggtgattgagaatgtaaagcgcggacagcacaagaagacc
ctagagcggctctttcctggcttccgacctgcagtggaagcctgctactttaactgggaa
gaggcctacccacttcctggtgtcacttacagcggcactgaccggaagctagccctgtgc
tgggcccgagccttgcctccacgtccaggagtctcccgttctgggggcctggaagaatcc
cgggacaggcctcgacctcttcctactgaactagctgtgcggcccaaggagcctgggccc
aagcgcaagggattgggtgagggggttccctcctcacagcggggtccccgccgcctctca
gctgaagggggagataagtctttgcataagttgggttcaggcgggggcaaagccaaggca
ctgggtggggctggcagtgggggcaagggctcagcaggcagtgggagcaagcgacggctg
agcagtgaggacagctccctggagccagatctggcagagatgagcctggatgacagcagc
ctggccctgggtgcagaggccagcacctttggtggattcctagaaagccctccaccctgt
cctacccctggtgtctcccgaggcccatccaccttccttcctgagcccccagatacttat
gaggaagatggtggcgtgtacttctcagaagggcctgagcttcccacagcctctgctggt
ccccccagcctactacctggggaggtctgtacccgggatgacctcccttctacagatgag
agtggcaatgggcttcccaaaaccaaagaggcagcccctgccattggagaggaggatgat
gactaccaggcatattacctgaatgcccaggatggggctgggggcgaggaggagaaggcc
gagggcggggctggggaggagcacgacctgtttgctgggctgaagccactggaacaggag
agccgcatggaggtgttatttgcctgtgctgaggccctgcacgctcatggttatagcagt
gaggcctcccgtctcactgtggagcttgcccaagacctgttagccaacccacctgacctc
aaggtagagccgccccctgctaagggcaagaagaataaagtatccacaagccgtcagacc
tgggtggctaccaacaccctgaccaaggcagccttcctgttgacagtgctaagtgagcgt
ccagaacaccacaatctggccttccgagttggcatgtttgccttggagctacagcggccc
ccagcttctaccaaggccttggaggtgaagctggcataccaggagtcagaggtggctgcc
ttgctcaagaaaattcctttgggtcccagtgagatgagtaccatgcgctgccgggcagag
gagcttcgggaggggacactctgtgactatcggcctgtgttgcctctcatgttggccagt
ttcatctttgatgtgctctgtgctccagtggtttctcccacgggttcccggcccccaagt
cgcaactggagcaatgagctgcctggagatgaggagctaggatttgaagcagcagttgct
gccttggggatgaagacaacagtgagcgaggcagaacatcccctcctatgtgaaggcaca
cgtcgggagaagggtgacctggcattagcactcatgatcacttataaggacgaccaggcc
aagctcaagaagatcttagataaactcttggatcgagagagccagacgcataagccacag
acgctgagctcattctactcatctagccgcccagctacagccaaccagaggtctccttca
aagcacgggggcccatctgccccaggggccctgcagccactgacctcaggctcggcaggg
cctgctcagccagggaatgtggcaggggctgggccaggccctgctgagggattcacagag
aagaatgtgcctgaaagttcccctcattccccatgtgagggtctcccatctgaggcagct
ttgaccccaaggccagagggaaaggttccaagccgcctggcacttggcagtcgtggaggc
tacaatggacggggctggggctccccagggcggcccaagaagaagcatacaggcatggct
agcatcgacagcagtgcccctgaaacaacatcggatagttcccccaccttaagccggagg
ccacttcgagggggctgggcccccacctcctggggtcgaggacaagacagtgacagcatt
agcagctcttcctcggattccctgggctcctcatcctccagtggaagtcgccgggccagt
gccagtggaggggcccgcacaaagacagttgaagttggcaggtacaagggccgccgccca
gagagtcatgccccccatgtacccaatcagccgtcagaggcagctgcacacttctacttc
gagctggcgaagacagtgctgatcaaggcagggggcaacagcagcacttccattttcaca
catccatcttcctcagggggccaccagggtcctcaccgcaacctgcacctttgcgccttc
gagattgggctttatgcccttggcctgcacaactttgtttctcccaactggctgtcacgt
acctattcttctcacgtctcctggattacagggcaggcaatggagattggcagtgcagcc
ctgactatactggtagaatgctgggatgggcatctgacaccccctgaggttgcatccctg
gctgacagagcatcacgggcacgagactccaatatggtgcgggcagcggcagagctggcc
ttaagctgtctgcctcatgcccatgcattgaaccccaatgaaatccagcgggctctggtg
cagtgcaaggagcaggataacctgatgttggagaaggcctgcatggcagtggaagaggcg
gctaagggtgggggcgtgtaccccgaagtattgtttgaggttgctcaccagtggttctgg
ctatatgagcaaacagcaggtggctcatccacagcccgtgagggggctacaagctgtagt
gccactgggatcagggcagctggggaggctgggcgggggctgcctgagggcagggggggc
ccagggactgaacctgttacagtggcggcagcagcagtgacagcagcagccacagtggtt
ccagtcatttcagtggggtccagtttatatccaggtccaggactggggcatggtcactct
cctggcctgcacccctatactgctttacagccccacctgccctgtagccctcagtacctc
acccacccagctcaccctgcccatcccatgcctcatatgccccggcctgccgtcttccct
gtgcccagctctgcatacccacagggtgtgcatcctgcattcctgggggctcagtaccct
tactcagtgacacctccctcacttgctgccactgctgtgtctttccctgtcccttccatg
gcacccatcacagtccatccctaccacacagagccagggctcccactgcccaccagtgtg
gccttgagcagtgtccatccagcatccacatttccagccatccagggtgcctcactgcct
gccctgaccacacagcccagccctttggttagtgggggctttccaccacctgaggaggag
acgcatagtcaacctgtcaatccacacagcctgcaccacctgcatgctgcctaccgtgtt
ggaatgctggcactagagatgctgggtcgccgggcacacaacgatcaccccaacaacttc
tcccgctcccccccttacactgatgatgtcaaatggttgctggggctggcagcaaagctg
ggagtgaactacgtgcaccagttctgtgtgggggcagccaagggggtgctgagcccgttt
gtgctgcaggagatcgtcatggagacgctgcagcggctgagccccgctcatgcccacaac
catctgcgtgccccggccttccaccaactggtgcagcgctgccagcaggcatacatgcag
tacatccaccaccgcttgattcacctgacccctgccgactacgacgactttgtgaatgcg
atccgcagtgcccgcagcgccttctgcctgacacccatgggcatgatgcagttcaacgac
atcctacagaacctcaagcgcagcaaacagaccaaggagctgtggcagcgggtctcactc
gagatgaccaccttctctccctga
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integrated database retrieval system
