Marmota marmota marmota (Alpine marmot): 107158154
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Entry
107158154 CDS
T09644
Symbol
Vcl
Name
(RefSeq) vinculin isoform X4
KO
K05700
vinculin
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04510
Focal adhesion
mmma04517
IgSF CAM signaling
mmma04518
Integrin signaling
mmma04519
Cadherin signaling
mmma04520
Adherens junction
mmma04670
Leukocyte transendothelial migration
mmma04810
Regulation of actin cytoskeleton
mmma04820
Cytoskeleton in muscle cells
mmma05100
Bacterial invasion of epithelial cells
mmma05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107158154 (Vcl)
04518 Integrin signaling
107158154 (Vcl)
04519 Cadherin signaling
107158154 (Vcl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107158154 (Vcl)
04520 Adherens junction
107158154 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107158154 (Vcl)
04810 Regulation of actin cytoskeleton
107158154 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
107158154 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107158154 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
107158154 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmma04812
]
107158154 (Vcl)
04147 Exosome [BR:
mmma04147
]
107158154 (Vcl)
Cytoskeleton proteins [BR:
mmma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107158154 (Vcl)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107158154 (Vcl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
WHD_2nd_SelB_bact
Motif
Other DBs
NCBI-GeneID:
107158154
NCBI-ProteinID:
XP_015360098
Ensembl:
ENSMMMG00000023388
UniProt:
A0A8C6ABR2
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtttcatacacgcacgattgagagcattctggagccggtggcgcagcagatc
tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtggccgccgtgcaagcggccgtcagcaacctcgtccgggttggaaaagag
actgttcaaactaccgaggatcagatattgaagagagatatgccacccgcatttattaag
gttgagaatgcttgcaccaagcttgtccaagcagcccagatgcttcagtccgatccttac
tcagtgcctgctcgagattatctaattgatgggtcaaggggcatcctctctggcacatca
gatctactccttaccttcgatgaggctgaggttcgtaaaattatccgagtttgcaaagga
attttggaatatcttacagtggcagaggtcgtggagactatggaagatttggtcacttac
acaaagaatcttgggccaggaatgactaagatggccaagatgattgatgagagacagcag
gagttgactcaccaggagcaccgagtaatgttggtgaactcaatgaacactgtgaaagag
ttgcttccagttctcatttcagctatgaagatttttgtaacaactaaaaattcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttactgtagaaaagatgagtgctgaa
attaatgagatcatccgtgtattacaactcacttcttgggatgaagatgcctgggccagc
aaagacactgaagccatgaagagagcattggcctccatagactccaaactgaaccaggcc
aaaggttggctccgtgaccccagtgcctccccaggggatgctggtgaacaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag
attctgggaacctgcaaaatgctagggcagatgactgatcaagtggctgacctccgagct
agaggtcaaggagcttcaccagtggccatgcagaaagcccagcaggtatctcaaggtcta
gatgtgctcacagcaaaggtggagaatgcagctcgaaagttggaagccatgacaaactca
aagcagagcatagcaaagaagattgatgctgctcagaattggcttgcagatccaaatggt
ggacctgaaggagaagaacagatccgaggggctttggctgaagctcggaaaatagcagaa
ttgtgtgatgatcctaaagagagagatgacattctgcgttcccttggagaaatatctgct
ctgacttctaaattagcagatttacgaaggcaggggaaaggagattccccggaggctcga
gcattggccaaacaggtggccacggcccttcagaacctgcagaccaaaaccaacagggct
gtggcaaacagcagacctgccaaagcagctgtccaccttgagggcaaaatcgagcaagca
cagcgatggattgataatcctacagtggatgaccggggtgtcggtcaggctgccatccgg
gggcttgtggctgaaggacatcgtctggctaatgtcatgatggggccttatcgtcaagat
cttcttgccaagtgtgaccgtgtggaccagttgacagctcagctggctgacctggctgcc
agaggggaaggggaaagtcctcaggccagagcacttgcatcacagctccaagactcctta
aaggatctgaaagccaggatgcaggaggctatgactcaggaggtgtcagatgttttcagt
gataccacaactcccatcaagctattggcagtggcggctactgcccctcctgatgcaccc
aatagggaagaggtatttgatgagagggcagcaaactttgaaaaccattcaggaaggctt
ggagctacagcagagaaggcggctgctgttggtaccgctaataaatcaacagtggaaggc
attcaggcatcagtgaagactgctcgagaactcacaccccaggtcatctcagctgctcgc
atcttactgaggaaccctggaaatcaagccgcttatgaacattttgaaaccatgaagaac
cagtggattgataatgttgaaaaaatgacagggctggtggacgaagccattgataccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagatctggacaagtgtaaggtagcc
atggccaacattcagcctcagatgctggttgctggggcaacaagcattgctcgtcgggcc
aaccgaatcctgctggtggcgaagagggaggtggagaactctgaggatcccaagttccgt
gaggctgtgaaagctgcctctgatgaactgagcaaaacaatctcccctatggtgatggat
gcaaaggctgtggctggaaacatttctgaccctggcctgcagaagagcttcctggactct
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggaacct
gacttcccacctcctccacctgaccttgaacagctccgactaacagatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctccacccaggcccccaccaccagaggaa
aaggatgaagagtttcctgagcagaaagccggggaggtgattaatcagccaatgatgatg
gctgccaggcagctccatgatgaagctcgcaaatggtccagcaagggcaatgatatcatt
gcagcagccaagcgcatggctctgctgatggctgagatgtctcggctggtaagaggggga
agtggtaccaagcgggcactcattcagtgtgccaaggacattgccaaggcctcagatgaa
gtgactcggttggccaaggaagttgccaagcagtgcacagataagcggattagaaccaac
ctcttacaggtatgtgagcgaatcccaactataagcacccagcttaaaatcctgtctacc
gtaaaggccaccatgctgggccggaccaacatcagtgacgaggaatctgagcaggccaca
gagatgctagttcacaatgcccagaacctcatgcagtcagtgaaggagactgtaagagaa
gcagaagctgcttcaatcaaaattcgaacagatgctggatttacactgcgctgggtcaga
aagactccctggtaccagtag
DBGET
integrated database retrieval system
