Marmota marmota marmota (Alpine marmot): 107158166
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Entry
107158166 CDS
T09644
Symbol
Gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03022
Basal transcription factors
mmma03420
Nucleotide excision repair
mmma05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107158166 (Gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
107158166 (Gtf2h1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
107158166 (Gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107158166 (Gtf2h1)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107158166 (Gtf2h1)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107158166 (Gtf2h1)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107158166 (Gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
107158166
NCBI-ProteinID:
XP_048644161
Ensembl:
ENSMMMG00000005016
UniProt:
A0AAJ7ZD45
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSFSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEKQFFSFPMSNYPGSLLLSLWN
FFLFPVNCWGLKDRNRVLLLCMTGFFFCAIFRYYHGPTPIQSLQYATSQDIINSFQSIRQ
EMEAYTPKLTQVLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVG
ELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEML
QTAYNKLHSWQSRRLMKKT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctgatcgtgaagaaggtgcgtcaaaagaagcag
gatggagctctatacctcatggcagaaagaattgcttgggcgccagaaggcaaagataga
tttacaatcagccatatgtatgctgatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcagcttcagctggtcctacatgcaggggacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagagcgagatgcagtgaaggaccttcttcagcaactactg
cccaaattcaagaggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttacaaagaccttgttgtaagtcaagttatcagtgctgaa
gaattctgggccaatcgtttaaatgtgaatgcaacagatagtttttccacatcaaatcac
aagcaagatgttggcatttctgcagcatttctggctgatgtccggccccagacagatggt
tgtaatggtttaagatataatttaacttctgatatcattgaatccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccataacatgacagaaaaggaattc
tggacacgtttttttcagtctcattatttccatagggaccggctgaatacagggtcaaag
gatctctttgcagaatgtgccaaaatagatgaaaaaggtttaaaaacaatggtttcatta
ggagtgaaaaacccactactcgatttaacagctttggaagataaaccattagatgagaaa
caattttttagctttcccatgagcaattatccaggaagccttctattatctctctggaac
ttttttctttttcctgttaattgttgggggttgaaagacagaaatagagtacttttacta
tgtatgactggtttcttcttctgtgctatcttcaggtattatcatggtccaactccaatt
cagtcactacagtatgcaacgagtcaggacattattaattcttttcaaagtattagacaa
gaaatggaagcttacacacccaagttaactcaggttctctcaagtagtgccgctagtagt
accatcacagcactgtcacctggaggagcacttatgcagggagggacacagcaagccata
aaccagatggtgccaaatgatattcagtccgaattgaaacatttgtatgtggctgttgga
gaacttctgcggcatttttggtcctgttttcctgttaatacaccattcctagaagaaaag
gtagtgaaaatgaaaagtaatttggaacgattccaagttacaaagctctgcccattccaa
gaaaaaattcgaagacagtatttaagcacaaatttggtaagtcacatagaagagatgctt
cagacagcctacaacaagctacactcgtggcagtcacggcgcttgatgaagaagacgtga
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