Marmota marmota marmota (Alpine marmot): 107158313
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Entry
107158313 CDS
T09644
Name
(RefSeq) ATP-binding cassette sub-family A member 6-like
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107158313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107158313
Transporters [BR:
mmma02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
107158313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
nSTAND1
AAA_15
AAA_22
AAA_23
Dynamin_N
Endonuc-BsobI
Motif
Other DBs
NCBI-GeneID:
107158313
NCBI-ProteinID:
XP_048654165
Ensembl:
ENSMMMG00000012633
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
MRIKQTSVYQQTQALLCKNFLKKWRMKRESALEWGLPILLGLYVGLLSEVKENNQLPEIP
PQDLGRVDKFNVSSIMIVYTPVSNITQQIMNTTAFAPLMKGTRIIGVPNEKDMDDVIFQN
FPHAVGITFSDTFSYKLKFFQGYAVPFLRDDLTGHCWEIYGEYSCVLSKYWERGFVTLQS
IINAAIIEVTTNHSVIDELMSVTAINMKTLPFISKDIFQSEMFILYCLLYFSPFIYFVSH
NVTKERKKSKELMKMMGLHDSAFWLSWGLMYTAFILVLSIVITIIITSTQVILMTGFMVI
FTLLFLYGLSLLALSFLMSVLLQKAVLTNLFVFLLTLFWGFVGFTAFYKQLPPSVQWILS
ICSPFAFRVGMTQILHLDYNLNGVVFPDPSEKSYTMLATFSVLAFDGLIYLMLALYFDKI
LPHGNEHRYSPLFFLSSSSCFRHRRTDNTVIEKDLDPEHPSDGYFEPIASEFQGKEAIRI
RNVKKEYKTKSGQVKALKGMLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTI
YNKNLSEMQDLEEIRKITGVCPQNNVQIDMLTVKENLSLFAKIKGIRPQEVEQEVQQILL
ELDMQNIQDNLAIHLSDGQKRMLTFGIAILGDPQVLLLDEPTAGLDPFSRHQVWTFLKER
RANRVILFSTQSMEEADILADRKVIMSNGELKCAGSSVFLKRKWGLGYHLSLYKNEISDP
EQITSFINHHISDAKLKLENKEKLVFTLPLESTSKFPGNLNMITKKASSQLWISGLYPSA
YWCGQAVVDVNLFNLILLLMYLIICITNKMGISVTSQGIFAMVVVSLGYSASLIFLTYVI
SFIFRKRRKNSGLWSFCFYVVLTVMPYIILVSDFNITVIIVSMVLLPSSTLEVFLLFLSK
RAQEYHEEFQEFKFHLSAVDLLVCLIVRGSYYLTTYSFEWLSFTITIGLVELLRLALNSQ
SSCLSLLNCWNYRHAPPHLAETLTFDMSLTSGEPHVTFQFFYRISPQIQNVPLNPEIHVD
EDEDEDVQAERMRASSALTTSNVNENPVIIASCLHKEYAGQRKSCFSKRKKKIAARNISF
CVKKGEVLGLLGPNGAGKSSSIRMIAGITKPTGGQVELRVGECKSFLGQQGDGMVKFLGY
CPQENVLWPTLTMKEHLEVYATVKGLQKEDAAIVISRLVNAFNLYEQLNVPVQKLASGTT
KKLCFVLSILGNSPILLLDEPSTGIDPTGQQQIWQTIQAAVKNTEKSVLLTTHYLAEAEA
LCDRVAIMVSGRLRCIGSIQHLKRKFGKDYILELKVKEPSQVPLIHTEILNLFPQAAQQE
RFSSLLTFKLPIADVYPLSQAFYKLETVKHNFNLEEYTLSQCTLEKVFLELFSRPELGNV
DEEVDTTMRWKLLSYSDEP
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaaacagacaagtgtgtatcagcaaactcaagctcttctgtgtaagaatttt
cttaagaaatggaggatgaaaagagagagtgcattggaatggggcctcccaatactgcta
ggactgtatgtgggtctgctttcagaagtcaaagaaaataaccaattacctgaaatacct
cctcaagatctgggaagggtagacaaatttaatgtctcttctataatgattgtgtatact
ccagtctctaatataactcagcagataatgaatacaacagcatttgctcccttaatgaaa
ggaacaagaatcattggggtaccaaatgaaaaagacatggatgacgtaattttccagaat
ttcccacatgcagtgggaatcacctttagtgacactttctcttacaagttaaaatttttt
caaggatatgctgttccatttttgagagatgatttaacaggtcattgttgggaaatatat
ggtgaatattcatgtgtattgtccaaatactgggaaagaggatttgtgactttgcagagt
atcattaatgctgctattatagaagtcacaacaaatcactctgtgatagatgagttgatg
tcagtcactgctataaatatgaagacattaccttttatttctaaagacatttttcaaagt
gagatgttcattttatactgtttgctttatttttccccatttatatattttgtatcacac
aatgttacaaaagagaggaaaaagagtaaggaactgatgaaaatgatgggtctacatgat
tcagctttctggttgtcctggggtttaatgtatactgcattcatcttggtcctttccata
gtcattacaattatcataacatccacccaagttatactcatgactggctttatggtcata
tttacactcttattcttatatggcttgtctttgctagctttatcattcctgatgagtgtg
ctgttacagaaagctgtcctcacaaatttgtttgtgtttctcctcaccctcttttggggg
tttgtgggattcactgccttctataaacaacttcctccatctgtacagtggattttgagt
atttgtagccctttcgcctttagagttggaatgactcagattctccacctggattataac
ttgaatggagtagttttccctgacccctcagaaaaatcatatacaatgctagcaacattt
tctgtgttggcttttgatggtcttatctacttgatgctggcactgtactttgacaaaatc
ttaccccatggaaatgagcaccgctattctccattatttttcctgagttcatcatcttgt
ttccgacaccgaaggactgataatacggtcattgagaaagacctggatcccgagcatccc
tctgatggttattttgaacccatagcttctgaattccaaggaaaagaagccatcaggatt
agaaacgttaaaaaggaatataaaacaaagtctggacaagtgaaagctttgaaaggcatg
ctctttgacatatatgaaggtcagatcacagcaattttgggtcacagtggagctggcaaa
tcttcactcctaaacatccttaatggattgtctgttccaacagaaggatcagttaccatc
tataataaaaacctctctgaaatgcaagacttggaggaaatcagaaagataactggtgtt
tgtcctcaaaataatgttcaaatcgacatgctcactgtgaaggaaaacctcagcctgttt
gctaagataaaagggattcgaccacaggaagtggaacaagaggtacaacaaattttattg
gaattggacatgcaaaatattcaggataatcttgctatacatttaagtgacggacagaaa
agaatgctgacctttgggattgccattttaggagatcctcaagttttgcttttagatgaa
ccaactgctggattagatcccttttcaaggcaccaagtgtggactttcctgaaggaacgt
agagcgaatcgtgtgatcctcttcagtacccagtccatggaggaggctgacattctagct
gatagaaaagtgatcatgtccaatggggaactgaagtgtgcaggatcttctgtcttttta
aagagaaaatggggtcttggatatcacttaagtttgtataagaacgagataagtgatcca
gaacaaatcacatctttcattaatcatcatatctctgatgctaaattaaaactagaaaac
aaagaaaaacttgtatttactttgcctttggaaagcacaagtaaatttccaggtaactta
aacatgattacaaagaaagctagttctcagctatggatttcaggcctctacccctctgct
tactggtgtggacaggcagtggtggatgttaacctcttcaatttaattctccttttaatg
tatttaatcatctgcataacaaacaaaatgggcatttctgttacaagtcaaggtatattt
gctatggttgttgtatcacttggttattcagcttctcttatcttcctgacatatgtgata
tcatttatttttcgtaagaggagaaaaaacagtggcctctggtcattttgcttctatgtt
gtcttgactgtcatgccttacatcattttagtcagtgacttcaacataactgtgatcatt
gtcagcatggtattacttccatcatctactttggaagtatttctacttttcctgtcaaag
agagcacaggaataccatgaagaatttcaagaattcaaatttcacctgagtgctgttgat
cttctagtgtgcctaatagtaagaggatcttattacctcaccacatactcttttgaatgg
ctgtcatttactataactataggccttgttgagttgctgaggttggctttgaattctcaa
tcctcctgcctcagcctcctgaactgctggaattacaggcatgcaccaccacatctggct
gaaacactgacttttgatatgtctttgacaagtggagaaccacatgtaacatttcaattt
ttctacagaatctccccacaaattcaaaatgttccacttaatccagaaatacatgtagat
gaagatgaagatgaagatgttcaagcagaaagaatgagagcatcaagtgccctgaccact
tcaaacgtaaatgagaatccagtcataattgccagctgtctacacaaagagtatgcaggc
cagaggaaaagttgcttttcaaagaggaagaagaaaatagcagcaagaaatatatctttc
tgtgtgaaaaaaggtgaagttttgggattgctaggacccaatggtgctggtaaaagttct
tctattaggatgatagctgggatcacaaagccaacaggaggacaggtggaactgagagtt
ggggaatgcaagtcatttctgggtcagcagggagatggcatggtcaagttcctggggtac
tgtcctcaggagaatgtgctgtggcccaccctgacaatgaaggaacacctggaggtgtat
gccactgtgaaagggctgcagaaagaggacgctgccattgtgatttcacgactagtgaat
gctttcaacctgtatgagcagctaaatgttccagtgcagaaattagcatcaggaaccacc
aaaaagctatgttttgtgctgagcatcctgggaaattcacccatcttgcttctggatgaa
ccctctacaggcatagatccaacagggcagcaacagatttggcagacaatccaggcagct
gttaagaacactgagaagagtgtcctcttgaccacccactacttggctgaggctgaggct
ctgtgtgaccgtgtggccatcatggtgtctggaaggctgagatgcattggttctatccaa
cacctgaaaagaaaatttggcaaagattacattctagaactcaaagtgaaggagccttct
caagtacctttgatccacaccgagattctgaatcttttcccccaggctgcgcagcaggaa
aggttttcttccttgttgacctttaagctgcccatagcagatgtttaccctctatctcag
gccttttacaaattagaaacagttaaacataactttaacctggaggaatataccctctct
cagtgcacgctggaaaaggtattcctggaactttttagtaggccagaactgggaaatgtt
gatgaagaagttgatacaaccatgagatggaaacttctttcttattcagatgaaccctaa
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integrated database retrieval system
