Marmota marmota marmota (Alpine marmot): 107158335
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Entry
107158335 CDS
T09644
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03082
ATP-dependent chromatin remodeling
mmma04714
Thermogenesis
mmma05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107158335 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
107158335 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
107158335 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107158335 (Smarcd2)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107158335 (Smarcd2)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107158335 (Smarcd2)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107158335 (Smarcd2)
PBAF complex
107158335 (Smarcd2)
GBAF(ncBAF) complex
107158335 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
107158335
NCBI-ProteinID:
XP_015360292
Ensembl:
ENSMMMG00000010172
UniProt:
A0A8C5Z8X6
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGTAAFR
PMGPAGPAAQYQRPGISPGSRMPMAGLQVGPPTGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPIPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSTGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgccccctctgagtcccggcggcggcgcc
gtggctgcggccctgggagcgccgcctcccccagcgggacccggaatgctgcccggcccg
gcgcttaggggcccggggcccgctggaggcgtggggggacccgggaccgccgccttccgc
cctatgggccccgcgggccccgctgctcagtaccagcggcctggcatatccccagggagc
cggatgcccatggctggcttgcaggtgggaccccctactggctccccatttggtactgct
gctccacttcgacctggcatgccacccaccatgatggatccattccgaaaacgcctgctt
gtgccccaggcccagcccccgattcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcagcgaattcgggagcttgtcccagagtctcaggcatacatg
gatctcttagcttttgagcggaagctggaccagaccattgctcgcaagcggatggagatc
caggaggccatcaaaaagcctctgacacaaaagcggaagcttcggatctacatttccaat
acattcagtcccagcaaggcagaaggtgatagtacaggaactgcagggacccctggggga
actccagcaggggacaaggtggcttcctgggaactccgagtggagggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattttttaagagtctcgtcattgagttg
gacaaggaactatatggacctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtgaaacgaccaggggacctaaatgtcaaatgcaccctt
ctgctcatgctggatcatcagcctccccagtataaactggaccctcggctggcaaggctg
ctgggagtgcacacacagacaagggctgccatcatgcaggccctgtggctttatatcaag
cacaatcagctgcaagatgggcatgagcgcgaatacatcaactgcaaccgttacttccgc
cagatcttcagctgtggccgactccgtttctctgagattcccatgaaattggctggattg
ctgcagcatccagatcccattgtcatcaaccatgtcatcagtgtggaccccaatgaccag
aagaagacagcttgttatgacattgatgtggaggtggatgacccattgaaagctcagatg
agcaattttctggcctctaccaccaaccagcaggagattgcctctttagacgtcaagatc
catgagaccattgagtccatcaaccagttgaagactcagagggatttcatgctcagcttt
agcactgacccccaggatttcatccaggaatggctccgttctcaacgccgagacctcaaa
atcatcactgatgtgatcggaaatcctgaggaagagagacgggctgctttctaccatcag
ccctgggcccaagaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
DBGET
integrated database retrieval system
