Marmota marmota marmota (Alpine marmot): 107158894
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Entry
107158894 CDS
T09644
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107158894 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107158894 (Cnot3)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107158894 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107158894 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
107158894
NCBI-ProteinID:
XP_015360867
Ensembl:
ENSMMMG00000003763
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGAPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPSATQPRPPSAQPGGGGGGGGGGSGNNSNSSTGGGAG
KQNGATSYSSVVADSPAEVALSSSGGNSASSQALGPASGPHNPPPSTSKESSAAAPTGAG
GVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSTTPEVKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCP
LGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgccttaagaaggtgtccgag
ggtgtggagcagtttgaagatatttggcagaagctccacaacgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaatgagatcaaggacaaaaggcagcttattgacaac
cgcaagcttatcgagacgcaaatggaacggttcaaagttgtggaaagagagaccaaaacc
aaagcctatagcaaggagggcctgggcctggcacagaaggtggatcccgcccaaaaggaa
aaggaagaggttggccagtggctcacgaataccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaagtggaatcgctgtcagtgcaaacgcgcaagaagaagggcgacaag
gatcagaagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcttgcgcatgctggacaatgactccatcctcgtggatgcc
attcgcaagatcaaggatgatgttgagtactacgttgactcctctcaggaccctgacttt
gaggagaatgagttcctctatgatgacctggatctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggacgagatcttcaaccagtccagcagc
acgcccacctcaaccacctccagctctcccatcccccccagtccagccaattgcaccacg
gagaactctgaagatgataagaagagaggacgctcgacagatagtgaagtcagccagtct
ccagccaaaaatggttccaagcctgtccacagcaaccagcatccccagtccccagctgtg
ccacccacctacccctctggtcccccgcctgccgcctctgccttgagcaccacccctggc
aataatggggcacctgccccagcagcacccccaagtgccctgggccctaaggccagtcca
gctcccagccacaactcgggcacccctgccccctatgctcaggctgtggccccaccagcc
cccagtgggcccagtgctacccagccccgaccccccagtgcccagcctggcgggggtggt
ggtggcgggggtggagggagcggcaataatagtaacagcagcacaggtggaggggctggc
aagcagaacggtgccaccagctacagctcagtcgtggcagacagccctgcagaggtggcc
ctgagcagcagtgggggcaacagtgctagcagccaggccctgggtccggcctcaggtccc
cacaatccacctcccagcacctcgaaagaatccagtgcggcagccccaacaggggctggc
ggtgtggccccaggctcagggaacaactcagggggacccagccttctagtgccactgcct
gtgaacccccccagctccccaacgcccagcttcagtgaggccaaggcagctggtgctctg
cttaatggacctccgcagttcagcaccaccccagaagtcaaggctcctgagcctctgagc
tccctgaagtccatggcagagcgggcagccatcagctctggtattgaggaccctgtgcca
acgttacacctaacggagcgagacatcatcctgagcagcacatcagcacctccggcctca
gcccagccacccctgcaactgtcagaggtgaacataccactgtcgctgggcgtgtgtcca
ctggggccagtgcccctcaccaaggagcagctctaccagcaggccatggaggaggctgcc
tggcaccatatgccccacccctctgactccgagcgcatccggcagtacctaccccggaac
ccttgcccgacgcccccctaccaccaccagatgccgcccccacactcggacaccgtggag
ttctatcagcgcctgtcgactgagacgctcttcttcatcttctactatctggagggcact
aaagcacagtacctggcagccaaggccctaaagaagcaatcatggcgattccacaccaag
tacatgatgtggttccagaggcacgaggagcccaagaccatcactgatgagtttgagcag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga
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