Marmota marmota marmota (Alpine marmot): 107159040
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Entry
107159040 CDS
T09644
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03030
DNA replication
mmma03410
Base excision repair
mmma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107159040 (Pole)
03410 Base excision repair
107159040 (Pole)
03420 Nucleotide excision repair
107159040 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmma03032
]
107159040 (Pole)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107159040 (Pole)
Enzymes [BR:
mmma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107159040 (Pole)
DNA replication proteins [BR:
mmma03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
107159040 (Pole)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
107159040 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
107159040
NCBI-ProteinID:
XP_015361053
Ensembl:
ENSMMMG00000004659
LinkDB
All DBs
Position
Unknown
AA seq
2171 aa
AA seq
DB search
MDLRFGFERLKEPGEKTGWLINMHPTEVLDEDRRLVSAVDYYFIQDDGSRFKVALPYKPY
FYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDL
VKVRKEISPAVKKNREQDRASDAYTAMLSSVLQGGSVITDEEETSKKVADQLDNIVDMRE
YDVPYHIRLSIDLKIHVAHWYNIRYRGNAFPVDITRRDDLVERPDPVVLAFDIETTKLPL
KFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHL
IQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAAAHGLSMYQEIGFQKDSQGEYKAPQCI
HMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDA
VATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQE
FNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHALE
EEEKVPVEQAINFQEVCDQIKTKLISLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPS
AMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGP
VRAFHELSREEQAKYEKRRLADYCRKAYKKLHVTKVEERLTTICQRENSFYVDTVRAFRD
RRYEFKGLHKVWKKKLSAAMEAGDAAEVKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKG
ARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNA
KKPKVTISYPGAMLNIMVKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILP
ASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVY
GSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEF
LGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFD
IRTILDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKSDIYKQKKI
SELFVLEGKRQIVMAQGLEDSPRPGAPDMEDFGLIKPPHPAIPVATKRKRVLWESQEESQ
ELTLTVPWREILGQPPTLGTTQEEWLVWLRFHKKKWQLQARQRLARRKKQRLESAEDLPR
HGAIRDGPATGLGSFLRRTARSILDLPWQIVQISQTSQAGLFRLWAIIGSDLHSIKLSIP
RVFYVNQRVAKAEEGPSCRKVNRILPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDI
EGVYETQVPLLFRALVQLGCVCVVNRQLVRHLSGWEAETFTLDHLEMRSLAQFSYLEPGS
IRHIYLYHHTQGHKALFGLFVPSQRRASVFVLDTVRSNQMPSLSTLYSAEHSLLLEKVGP
ELLPPPRHTFEVRAETDLKTICRAIQRFLLAYKEERRGPTLIAVQSSWELQKLASEIPVL
EEFPLVPVRVVDKISYGVLDWQRHGARRMIQHYLHLDTCLSQAFEMSRYFHIPVGNLPED
ISTFGSDLFFARHLQRHNHLLWLSPTARPDLGGKEADDNRLVMEFEDRATVEINSPGCYS
TVCVELDIQNLAVNTILQSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQASSAPASYD
ETALCSSTFRILKSMVVGWVKEIMQYHNVYADNQVVHFYRWLQSSSSLLHDPALHRTLHN
MMKKLFLQLVAEFQRLGSSVVYANFNRIILCTRKRRIEDAIAYVKYITNSIHSKELFHSL
TISFSRCWEFLLWMDPSNYGGIKGKVPSGIHCGQQEPQKGEEAEDEQEDEEEQEESVEES
EVEDLLENNWNILQFLPQAASCQSYFLMIVSAYIVAVYHSMKEQLRRSGPGTTPVKRRGA
SQFSQEAEGAAGALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRSSTEPSEMFPVL
PGSHLVLNNPALEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRS
YVLPEVICHSCNFCRDLDLCKDSSFSQVGWFGCGADEAEAMVLPSFCPPCCLQAPLELLC
QRLSRGWGPHR
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcgatttggttttgagaggttgaaggagcctggtgagaagaccggctggctc
atcaacatgcaccctactgaggtcttagatgaagatagacgcttagtcagtgcagtggat
tactactttattcaagatgatggaagcagatttaaggtggccttaccttataagccgtat
ttctacattgcaaccagaaagggctgtgaacgagaagtttcatcttttctctccaagaag
tttcagggtaaaattgcaaaagtagagactgtccccaaagaggacctggacttgccaaat
cacttggtgggtttgaagcgaaattacatcaagctgtccttccacactgtggaggacctt
gtcaaagtgaggaaagaaatctcccctgctgtgaagaagaatcgggagcaggaccgtgcc
agtgatgcatacacagccatgctctccagcgttctgcaagggggcagtgtaattactgat
gaagaggaaacctctaagaaagtagctgaccagctggataacatagtggacatgcgcgag
tatgacgtcccctaccacatccgcctctccatcgaccttaagatccatgtggctcattgg
tacaacatcagatatcggggaaatgcttttccagtggacattacccgccgggatgacctt
gttgagcgacctgaccctgtggtgttggcatttgacattgagaccaccaaactgcccctc
aaatttcctgatgctgaaacagaccagattatgatgatttcttacatgattgatggccag
ggctacctcatcaccaacagggagatcgtttctgaagatattgaagattttgagttcacc
cccaaaccagaatatgaagggcccttctgtgtcttcaatgaacctgatgaggtccatctg
atccagcgatggtttgagcatatccaggagactaaacccaccatcatggtcacttacaac
ggggacttttttgactggccgttcgtggaggccagagcagcggcccacggcctgagcatg
taccaggagatcggcttccagaaggatagccagggggagtacaaggcaccacagtgcatc
cacatggactgcctcaggtgggtaaaaagggacagctaccttcccgtgggcagtcataac
ctgaaggcagccgccaaggctaagcttggctacgaccctgtggaattagatcctgaggac
atgtgccggatggccaccgagcagccccagactctggccacatactctgtgtcggatgct
gttgccacttactacctgtacatgaagtatgtccatcccttcatatttgccctgtgcacc
attatccccatggagcctgatgaggtgctgcggaagggctcgggcacactgtgtgaggcc
ttgctgatggtgcaggccttccacgccaacatcatcttccccaacaagcaagagcaggag
ttcaacaagctgacagacgatggccacgtgttggatgctgagacctatgtggggggccac
gtggaggcactggagtcgggcgtcttccgcagtgacatcccctgccgatttaagatgaat
cctgctgcgtttgacttcctgctgcagcgggtggagaagaccatgcgccatgcccttgag
gaagaggagaaggtgcctgtggagcaagccatcaactttcaagaggtgtgtgatcagata
aagaccaagctcatctctctgaaagatgttcccaaccgaatcgaatgtccccttatctac
cacctggatgtgggggccatgtaccccaatatcatcctgacaaaccgcctgcagccctct
gccatggtagacgaggccacctgtgctgcatgtgacttcaacaagcctggagcaaactgc
cagaggaagatggcctggcagtggaggggcgagttcatgccagccagtcgcagtgaatac
catcgaatccagcaccagctggagtcagaaaagttcccccccttgtttcccgaggggccg
gtgcgggcctttcacgagctgtcccgggaggagcaggccaaatacgagaagcggaggctg
gcagattactgccggaaagcctacaagaagctccatgtcaccaaggtggaggagcgcctc
accaccatctgccagcgggagaactccttctacgtggacacggtgcgcgccttccgagac
aggcgctacgagttcaaagggctgcacaaggtgtggaaaaagaagctctctgcagccatg
gaggcgggtgatgcagccgaggtgaagcgctgcaggaacatggaggtcctgtatgactcg
ctgcagctggctcacaagtgcattctcaactccttctacggctacgtcatgcgcaagggg
gcacgctggtactccatggagatggctggcattgtctgctttacgggggccaacatcatc
acccaggcccgagaactgatagaacagatcgggaggcccttggaactggacacagatgga
atatggtgcgtcctgcccaatagcttcccagaaaattttgtcatcaagactaccaatgca
aagaaacccaaggtgaccatctcttaccctggggccatgttgaacatcatggtcaaggaa
ggctttaccaacgaccagtaccaggagttggcagagccctcctcactcacctacgttacc
cgctcagagaacagcatcttttttgaagttgacgggccctaccttgccatgatccttcca
gcctccaaagaagaggggaagaaactgaagaagagatatgctgtatttaatgaagatggt
tccctggctgagctgaagggcttcgaggtcaaacgccgtggggagctgcagctgattaaa
atcttccagtcctctgtgttcgaggccttcctcaagggcagcaccctggaggaagtgtat
ggctccgtcgccaaggtggctgactactggctggacgtgctatacagcaaggcagctaac
atgcccgattctgagctgttcgagttgatatctgagaaccgctcgatgtctcggaagcta
gaagattatggggagcagaagtccacatctatcagcacagcaaagcgcctggctgagttc
ctgggagaccagatggtcaaggatgctgggctgagctgccgttacatcatctcccgcaag
cctgagggctctcctgtcactgagagggccatcccacttgccattttccaagcagagccc
acagtgaggaagcactttcttcggaaatggcttaagagctcatcccttcaagactttgat
attcggacaattctggactgggactactacatcgagcgcctggggagtgccatccagaag
atcatcaccatccccgcggctctgcagcaggtgaagaacccagtgccacgcgtcagacac
ccagactggctgcacaagaagctgctggagaagagtgacatctacaagcagaagaagatc
agtgagctgtttgtccttgagggaaagagacagatcgtgatggctcagggcctagaagac
agccccaggccaggtgctcccgacatggaggactttggcctcataaagccaccccatcca
gcaatccctgtagccaccaagaggaagcgagtcctctgggagagccaagaggagtctcag
gaactcacgctgacggtgccctggcgggagatcttggggcaacctcctacacttggcacc
acccaggaagaatggctggtctggctccggttccacaagaagaagtggcagctacaggcc
cgacagcgcctggcccgcaggaagaagcagcgtctggagtcggcagaggatttgccaagg
catggggccatccgagacgggcctgccacagggctggggagcttcttgagaagaactgca
cgtagcattctagaccttccctggcagattgtacagatcagccagaccagccaggctggc
ctgttcaggctgtgggccatcattggtagtgacttgcactctatcaagctgagcatcccc
cgcgtgttctatgtgaaccagcgagtggccaaagcagaggaggggccttcctgtcggaag
gtgaaccgcattctgcctcgttccaacatggtctacaatctctatgagtattcagtgcca
gaggacatgtaccaagaacacatcaacgagatcaacactgagctgtcagcgccggacatc
gagggtgtctacgagactcaggtgccgttgttgttccgggcactggtgcagctgggctgt
gtgtgtgtggtcaacagacagctggtgcggcacctctcgggctgggaagctgagaccttc
accctagatcacctcgagatgcgttctctggcccaattcagctacctggaaccaggcagc
atccgccacatctacctgtaccaccacacgcagggccacaaggcactctttgggctcttt
gtcccctcacagcgcagagcatctgtgtttgtgttggacacggtgcgcagcaaccagatg
cccagcctcagcaccctgtactcagcggagcacagccttctgctggagaaggtgggcccc
gagctcctgccaccccccagacatacctttgaagttcgtgctgaaactgacctgaagacc
atctgcagggccatccagcgcttcctgctggcctacaaggaggaacgccggggacccacc
ctcattgcagtgcagtccagctgggaactgcagaagctcgccagcgagatccctgtgctg
gaggagttcccgctggtgcctgtgcgcgtggtcgacaagatcagctatggagtcctagac
tggcagcggcacggagcccgccgcatgatccagcactacctccacctggacacctgcctg
tcacaggccttcgagatgagcaggtacttccacattcccgttgggaatctgccagaggac
atctccacctttggctccgaccttttctttgcccgccacctgcagcgtcacaaccacctg
ctctggctgtcccccacagcccgtcccgacctgggcgggaaggaggccgacgacaaccgc
cttgtcatggaattcgaggaccgtgccaccgtggagattaacagtcctggttgctactcc
accgtgtgtgtggagctggacatccagaacctggccgttaacaccatcctccagtcccac
cacgtgaacgacatggagggggccggcagcatgggcatcagctttgacgtgatccagcag
gcctcactggaggacatggtcacaggcaatcaggcctctagtgccccagccagctacgat
gagacagccctctgctccagcaccttcaggatcctcaagagcatggtcgtgggctgggta
aaggagatcatgcagtaccacaacgtctacgccgacaaccaggtggtgcacttctaccgc
tggctacagtcctcgagctctctgctgcatgaccccgccctgcaccggacactccacaac
atgatgaagaagctcttcctgcagctcgtggctgagttccagcgcctggggtcatcagtc
gtctatgccaatttcaaccgaatcattctctgtaccagaaagcgccgcattgaggacgcc
atcgcctacgtgaagtacatcaccaacagcatccattctaaagagctcttccattccctg
accatttccttctcacgatgctgggaattccttctgtggatggatccgtctaattatggt
ggaatcaaaggaaaagtgccatctggaattcactgtggacagcaagagccccagaaagga
gaggaagcagaggacgagcaagaagacgaggaggagcaggaggaaagtgtggaggagtct
gaggtagaggacctcctggagaacaactggaacattttgcagtttctgccacaggcagcc
tcctgccagagctacttcctcatgatcgtttcggcgtacattgtggctgtgtaccacagc
atgaaggaacagctgagacgcagtggcccgggcaccacccctgtgaagaggaggggggcc
agccagttctcccaggaggctgaaggggcggccggagccctccctggaatgatcaccttc
tctcaggattatgttgcaaacgagctcactcagagcttcttcaccatcactcagaagatt
cagaagaaagtcacaggctctcggagctccacagagccctcagagatgttccctgtcctc
cctggctcccacttggtgctcaacaaccctgctctggagttcatcaaatatgtgtgcaag
gtgctatctttggatacaaacatcaccaatcaggtgaacaagctgaaccgagacctgctt
cgcctggtagatgttggtgagttctccgaggaggcccagttccgagacccctgccgctcc
tatgtgctccctgaggtgatctgccacagctgcaacttctgccgagacttggatctgtgc
aaagattcctccttctcccaggtgggctggtttgggtgtggggcagacgaagctgaggcc
atggtcctgccatccttctgtccaccctgctgcctgcaggctcctcttgagctattgtgc
cagaggttgtcacgagggtgggggccccacaggtga
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integrated database retrieval system
