KEGG   Marmota marmota marmota (Alpine marmot): 107159103
Entry
107159103         CDS       T09644                                 
Symbol
Cacna1b
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04010  MAPK signaling pathway
mmma04020  Calcium signaling pathway
mmma04721  Synaptic vesicle cycle
mmma04723  Retrograde endocannabinoid signaling
mmma04725  Cholinergic synapse
mmma04726  Serotonergic synapse
mmma04727  GABAergic synapse
mmma04728  Dopaminergic synapse
mmma04930  Type II diabetes mellitus
mmma05016  Huntington disease
mmma05020  Prion disease
mmma05022  Pathways of neurodegeneration - multiple diseases
mmma05032  Morphine addiction
mmma05033  Nicotine addiction
mmma05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107159103 (Cacna1b)
   04020 Calcium signaling pathway
    107159103 (Cacna1b)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    107159103 (Cacna1b)
   04725 Cholinergic synapse
    107159103 (Cacna1b)
   04728 Dopaminergic synapse
    107159103 (Cacna1b)
   04726 Serotonergic synapse
    107159103 (Cacna1b)
   04723 Retrograde endocannabinoid signaling
    107159103 (Cacna1b)
   04721 Synaptic vesicle cycle
    107159103 (Cacna1b)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    107159103 (Cacna1b)
  09164 Neurodegenerative disease
   05016 Huntington disease
    107159103 (Cacna1b)
   05020 Prion disease
    107159103 (Cacna1b)
   05022 Pathways of neurodegeneration - multiple diseases
    107159103 (Cacna1b)
  09165 Substance dependence
   05032 Morphine addiction
    107159103 (Cacna1b)
   05033 Nicotine addiction
    107159103 (Cacna1b)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    107159103 (Cacna1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mmma04040]
    107159103 (Cacna1b)
Ion channels [BR:mmma04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   107159103 (Cacna1b)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 107159103
NCBI-ProteinID: XP_048669371
LinkDB
Position
Unknown
AA seq 2379 aa
MVRARCACVGTRACAGGGLVLPLWERTAPSRGEPAGRSRAEALSAVLTAARTCRGAGGCY
CRGPAFRRSPGMGVGSEKDQPSSVEVPRLLHCAATGLCRCGASWPVLNPHTPFEYMILAT
IIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRN
GWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLL
QIGLLLFFAILMFAIIGLEFYMGKFHKACFPNSTDADPVGDFPCGKEAPARLCEGDTECR
EYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGS
FFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED
KNAEEKSPLDAVLKRAATKKSRHDLIHAEEGEDRLADLCAVGSPFARASLKSGKTESSSY
FRRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLG
LFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLL
RIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFKDETPT
TNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNV
FLAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKRTRG
TVSRSSSVSSVDSPQQNSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERMRYATTR
HLRPDMKTHLDRPLVVEPPGRDGPRGPMGGKARPEGTEVTEGVDPPRRHHRHRDRDKVPA
VVPAVGEQDRADAVKAESVEPGAREERARPHRSRSKDAAGALESRSERSRGPGPEGGRRH
HRRGSPDEAAEREPRRHRAHRHGPDQGKEGVAPTAKSERRLRHRGPRAGSREAESGEEPM
RRHRVRHKVLSVHEPTEKEATEKEAAEKEGEMVEADKEIRNHQPKEPHCGLEASGVMGIA
PVHVLPSTCLQKVEEQPEDADNQRNVTRMGIESSDPSSTLHVPVTLAGPPGETTVAPSGN
MDLESQGEGKKEAEADDVLRSGPRPIVPYSSMFCLSPTNLLRRFCHYIVTMRYFEMVILV
VIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVMKMIDLGLLLHPGAYFRDL
WNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNS
LKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQP
RQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGFRMELSIFYVV
YFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQ
SFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNMVFTSMFSLEC
VLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSFLRLFRAARLVKL
LRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDDTSINRHNNF
RTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPDANASECGSDFAYFYFVSFIFLCSFL
MLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSP
PLGLGKKCPARVAYKRLVRMNMPISSEDMTVHFTSTLMALIRTALEIKLAPAGAKQHQCD
AELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQIHQAP
GGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSSTSLSNGGAIQTQESGIKESVS
WGTQRTQDALYEARAPLERGHSAELPVGQPGTLAADVQMQNMALRGPGGEPQPGLESQGR
AASMPRLAAETQPAPDASPMKRSISTLAQRPHGGHLCNTTLDRPPPSQAPHHHHHRCHRR
RDKKQRSLEKGSSQHADTDGAPNSTARPSLPPGEGPTGCRRERERKQERGRSQERRQPSS
SSSEKQRFYSCDRFGGREHPQPKPSLSSHPTSPTAGEPGPPPQGSGSINGSPLLSTSGAS
TPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAGAQSGLPAFSPGRLSRGLSEHNALLQ
RDPLSQPLAPGSRISSDPYLGQRMDSEASAHTLPEDTLTFEEAVATNSGRSSRTSYVSSL
TSQSHPLRRVPNGYHCTLGLGTGSRARHSYHHPDQDHWC
NT seq 7140 nt   +upstreamnt  +downstreamnt
atggtccgtgcgcgctgcgcgtgcgtgggaacgcgcgcctgcgcgggcgggggtctcgta
ttgccgctctgggaacgcacagcccccagccgtggggagcctgccgggcggagccgggcg
gaggcgctgtccgcggtgctgacggccgcccggacgtgcagaggggctggcggctgctac
tgcagaggccccgcctttcggcggtcccctgggatgggggtgggcagcgagaaagaccaa
ccctcgtccgtggaagtgccaaggctgctgcactgcgcggccaccggcctctgccgctgt
ggcgcctcctggccagtccttaacccacacactccctttgagtacatgatcctggccacc
atcatcgccaactgcatcgtgctggccctggagcagcatctccctgacggagacaagacg
cccatgtccgagcgcctggatgacacagagccctatttcatcggcatcttttgctttgag
gcggggatcaagatcatcgcgctcggctttgctttccacaagggctcctacctgcggaat
ggctggaacgtcatggacttcgtggtggtcctcacagggatccttgccacagctggaact
gacttcgacctgcgaacactgagggctgtgcgcgtgctgaggcctctgaagctggtatcg
gggattccaagtttgcaggtggtgctcaagtccatcatgaaggccatggttccactgctg
cagattgggctgctactcttctttgccatcctcatgtttgccatcattggcctcgagttc
tacatgggaaaattccacaaggcctgtttccccaacagcacagatgcagatcctgtgggt
gacttcccctgtggcaaggaggcccctgcccggctgtgtgagggtgacaccgagtgccgg
gagtattggccaggacccaactttggtatcaccaactttgataacatcctgtttgccatc
ttgacagtgttccagtgcatcaccatggagggctggactgacatcctctacaatacaaat
gatgcagctggaaacacctggaactggctctacttcatccccctcatcatcatcggctcc
ttcttcatgctcaaccttgtgctgggtgtgctctcaggggagttcgccaaggagcgagag
cgggtggagaaccgccgtgccttcctgaagctccgccggcagcagcagatcgagcgggag
ctcaatgggtacctggagtggatcttcaaggctgaggaagtcatgctggcagaggaggac
aagaatgcagaggagaagtcccctttggatgccgtgttgaagagagccgccaccaagaag
agccgccacgacctgatccacgctgaggagggggaggaccggcttgcagacctctgtgcc
gtggggtccccctttgcccgtgccagcctcaaaagtgggaagacagagagttcatcgtat
ttccggaggaaggagaagatgttccggttcttcatccggcgcatggtgaaggcgcaaagc
ttctactgggtggtgctgtgtgtggtggctctgaacacactctgtgtggccatggtgcac
tacaaccagccgcagcggctcaccacagctctgtactttgcagagtttgttttcctgggt
ctcttcctcacagagatgtccctgaagatgtatggcctggggcccagaagctacttccgg
tcctccttcaactgcttcgactttggggtcattgtggggagcatctttgaagtggtctgg
gctgccataaaaccaggaacctcctttgggatcagcgtgctgagggcactccgcttgctg
cggatcttcaaggtcacaaagtactggaactccctgaggaacttggtggtgtctctgctc
aactccatgaagtccatcatcagcctcctctttctgctcttcctgttcattgtggtcttt
gctctcctggggatgcagctgtttgggggacagtttaacttcaaagatgagactccaacg
accaacttcgacacctttccggctgccatcctcacggttttccagatcctaacaggagag
gactggaatgcagtgatgtatcatgggatagaatctcaaggtggagtgagcaaaggcatg
ttctcctccttttacttcatcgtcctgacgctgtttggaaactacaccttgctgaatgtc
ttcctggccatcgctgtggacaaccttgccaatgcccaggagctgaccaaggatgaagag
gagatggaagaagcagccaatcagaagctggctctgcagaaagccaaggaagtggctgaa
gtcagccccatgtctgctgccaacatctccattgctgcttttgtaaaacgaactcgaggt
actgtgtctcgcagctcatctgtctccagcgtagattcaccgcagcagaactcggccaag
gctcgctcggtgtgggagcagcgggccagccagcttcggctgcagaacctgcgggccagc
tgtgaggcgctgtacagtgagatggacccggaggagcggatgcgctacgcaaccacgcgc
cacctaagaccagacatgaagacgcacttggaccggcctctggtggtggaaccaccaggg
cgggatggcccacggggtcccatggggggcaaagcccgacccgagggcacggaggtcacc
gagggtgtagacccaccacgacggcaccaccgacatcgtgaccgggacaaagttccggct
gtggtccccgcagtgggcgaacaggacagggctgatgctgtgaaggcggagagtgtggaa
cccggagcccgggaggagcgggcacgtccacaccgcagtcgcagcaaggacgcggcgggt
gcgctggagtcccggagcgagcgcagcaggggccctggccctgagggcggacgaaggcat
caccggcggggctccccggacgaggctgctgagcgcgagccccggcgccaccgtgctcac
cggcacggtccagaccagggcaaggaaggtgttgcacctactgccaagagcgagaggcgc
ttgcggcaccggggcccccgggccggttccagggaggcagagagtggtgaggagcctatg
cgacggcaccgggtgcggcacaaggtgctgtctgttcacgagcccactgaaaaggaggcc
acagagaaggaggctgcagagaaggagggcgagatggtggaggcggacaaggagatacgg
aaccaccagcccaaggagcctcactgtggcctggaggccagtggggtgatgggcatagcc
cctgtgcacgtgctgcccagcacctgtctccagaaggtggaggaacagccagaagatgca
gacaatcagagaaatgtcactcggatgggcatcgaatcctcagacccgagcagcacctta
catgtcccagtgacactggcaggccctcccggggagaccacagttgctcccagtggtaac
atggacctggagagccaaggagaggggaagaaggaggcagaagctgatgatgtgctgagg
agtggcccccggcccatcgtcccgtacagctccatgttctgtctaagccccactaacctg
cttcgccgcttctgccattacattgtcactatgcggtactttgaaatggtcattcttgtg
gtcattgccctgagcagcatcgccttggctgctgaggatcctgtgcggacagactcttcc
aggaacaatgctctgaagtacatggattacatcttcacaggtgtcttcacctttgagatg
gtgatgaagatgattgacttaggactgctgctgcaccctggagcctactttcgggacctg
tggaacattttggatttcattgtggtcagtggggccctggtggcatttgccttctcagga
tccaaagggaaagacatcaacaccatcaagtccctgagagttcttcgcgtcctgcggccc
ctcaagaccatcaaacgactgcctaagctcaaggctgtgtttgactgcgtggtgaactcc
ctgaagaatgtgctgaacatcctgattgtctacatgctcttcatgttcatatttgccgtc
attgcagtacagctcttcaaagggaagtttttctactgcactgatgaatccaaggagctg
gagagggactgcaggggtcagtatttggattatgaaaaggaggaagtggaagctcaacca
aggcagtggaagaaatacgacttccactatgacaacgtgctctgggccctgctcacactc
ttcacggtgtccaccggagaagggtggcccatggtgctgaaacactccgtggatgccacc
tatgaagagcagggtccaagccctgggtttcgcatggagctatccatcttctatgtggtc
tactttgtggtcttccccttcttttttgtcaacatctttgtggccttgatcatcatcacc
ttccaggagcagggggacaaggtgatgtctgaatgcagcctggagaagaatgagagggcc
tgcattgactttgccatcagcgccaagcccctgacacggtatatgccccaaaacaagcag
tcgttccagtataagacatggacgtttgtggtctccccccccttcgagtacttcatcatg
gccatgatagccctcaacacagtagtgctgatgatgaagttctacgatgcgccttatgag
tatgagctgatgctgaagtgcctgaacatggtgttcacctccatgttctccctggagtgt
gtgctgaagatcatcgcctttggggtgctgaactatttcagagatgcctggaatgtcttt
gactttgtcactgtgttgggaagtattactgatattttggtaacagagattgcggaaacg
aacaacttcatcaacctcagcttccttcgcctcttcagagctgcgcggctcgtcaagctg
ctgcgccagggctacaccatccgcatcctgctgtggaccttcgtccagtccttcaaggcg
ctgccctacgtgtgcctcctcattgccatgctgttcttcatctacgccatcatcggcatg
caggtgtttggaaacattgccttggacgacgacaccagcatcaaccggcacaataacttc
cgcacattcttacaagccctgatgctgttgttcaggagtgccacgggggaggcctggcat
gaaatcatgctgtcttgtctgagcaaccgggcctgtgacccagatgccaatgccagtgag
tgtgggagtgactttgcctacttctacttcgtgtccttcatcttcctttgctccttcctg
atgttaaatctatttgtggctgtgatcatggacaactttgagtacctaacgcgagactct
tccatccttgggcctcaccacctggacgagttcatccgggtctgggctgagtacgaccca
gctgcgtgtgggcgcatcagttacaatgacatgtttgagatgctgaagcacatgtccccg
cctctggggctggggaagaagtgccctgctcgagttgcatacaagcgcctggttcgcatg
aacatgcccatctccagtgaggacatgactgtgcacttcacatccacgctgatggccctc
attcgaactgcactggagatcaagctggccccagctggggcaaagcagcaccagtgtgat
gcagagctgaggaaggagatctcctctgtttgggccaatctgccccagaagaccttggac
ttgctggtgccaccccacaagcctgatgagatgacggtggggaaagtctatgcagcgctg
atgatattcgacttctacaaacagaacaaaaccacaagagatcagattcaccaagctcca
ggaggcctatcccagatgggccccgtgtccctgttccaccctctgaaggccaccctggag
cagacgcagccagccgtactccgaggagctcgggttttccttcggcagaagagctctacg
tccctcagcaatggtggggccatacaaactcaagagagtggcatcaaggagtccgtgtcc
tggggcactcagaggacccaggatgcactttatgaggctagggcacccctggaacgtggc
cactcagcagagctcccggtggggcagccaggaacactggctgcggatgtacagatgcag
aacatggcactgaggggtcctggtggggagccccaacctgggttggagagccagggccgg
gctgcctccatgccccgcctggcagcagaaacacagccggcccctgatgccagccccatg
aagcgctccatctccacgttggcccagcgcccacacgggggccacctctgcaacaccacc
ctggaccgccctccccccagccaggcaccacatcaccaccaccatcgctgccaccgccgt
agggacaaaaagcagaggtccctggagaaggggtccagccagcatgccgacacagatggc
gcaccaaacagcactgcaaggcccagcctgcccccaggagaggggcccacaggctgccgg
cgggaacgggaacgcaagcaggagcgaggccggtcccaggagaggaggcagccctcgtcc
tcttcctcagagaagcagcgcttctactcctgtgaccgctttggaggccgtgagcaccct
cagcccaagccctccctcagcagccaccccacgtccccaacagcaggggagccgggaccc
ccaccacagggtagtggttcaattaacgggagccccttgctgtcaacatctggtgctagc
accccgggccgaggtgggcggaggcagctcccccagacacccctgactccccgccccagc
atcacctacaagacggccaactcctccccggtccactttgctggggctcagagtggcctc
ccggccttctcccctggccggctcagccgtgggctttctgaacacaatgctttgctccag
agagaccccctgagccagcccctggctccaggctctcgcatcagctctgacccttacctg
gggcagcgcatggacagcgaggcctctgcccacaccctacctgaggacacactcaccttt
gaggaggccgtggccaccaactcaggccgctcctccaggacttcctatgtgtcttccctg
acctctcagtcccaccctctccgccgtgtgcccaacggctaccactgcactctgggactc
ggcactggcagccgggcgcggcacagctaccaccacccagaccaagaccactggtgctag

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