Marmota marmota marmota (Alpine marmot): 107159198
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Entry
107159198 CDS
T09644
Symbol
Snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X5
KO
K09453
snRNA-activating protein complex subunit 4
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107159198 (Snapc4)
03021 Transcription machinery [BR:
mmma03021
]
107159198 (Snapc4)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
107159198 (Snapc4)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
107159198 (Snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
107159198
NCBI-ProteinID:
XP_015361256
Ensembl:
ENSMMMG00000010852
UniProt:
A0A8C5ZCN5
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MDVDAEREKITKEIKELERILDPSSSNIHVEVSESSLDSDSDADSLPSEDLEAVEPPILE
EERWGEASNDEEDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEVSLLLAQNREQQEEILW
DLAGSRGPRVKDGKSLPPNMYIGHFMKPYFKDRVTGVGPPANEETREKAAQGIKAFEELL
VTKWKHWEKALLRKSVVSDRLQRLLQPKLLKLEYLRQKQSRVSSESEQQALEKQVREAEK
EIQDINQLPEEALLGNRLDNHDWEKISNIHFEGGRSAEEIRKFWQSSEHPSINKQEWSVK
EVEQLRAIAATHGHLEWHLVAEELGTSRSAFQCLQKFQEHNKALKRKEWTEEEDRMLTQL
VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPSLKKGFWAPEEDAKLLQAVAKYG
EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNAKEEEQLIELIEKYGVGHWAKIA
SELPHRSGSQCLSKWKVMAGKKKSLRRRRRRPCRRVRWSSDSSSSCSTGGGGSSSSSSSS
SSEDPETELEEPRKGLRGPLSPKYTVPDMDLWVPARQNTSQLQRGGAGGCSGHPAAFTGP
SKEFDATQGCSREASSTALAPQELNQREAPTGIHSPVPRGVQDPHLADPHPASLEEPASE
GGQHLLKVPLMTVQKVLRTSMAVQNRTLKERLRQPSPPDSPPGPGPGDGMAGPYLWQLRH
GTFQNGQQHRRHNLHRRLLERRLLLAVTPWVGDIALPCAQVPPRPAAVHTRANTIRMQLE
PTRLASTPVFTLLIQLLQIDTAGCLDVVRERKTQPPTSLQSGTQGLPPHLLQAPSCAQST
PGCPFPNVPTRNATKSASHRGSTGQESCQANSTSPQVPVAAPRGPRPKPKTVSELLREKR
LREARARRATQGPTLPPQLLVSPVTLGPPVLPAPQPQGSPATGPVSSTDCFGPRAPMAAS
ACPSGCWQETGVSDKDEGLPTLQALPLSPAPSPGQVPVGCPLSILGQSQAPTTSRKQGLP
EVLPFFPAAPSPTQLPMQPLNLTPALGTHRSGTPLAASIPLPVTWVLTAQGLLPLPVPAV
VGLPGPTGLPVKLPPPCCEAPACPSQPKASVDTEPAPSSRTDTSAPPTCPLSQSPLEVGG
NVPGALGEAQVVKEAAVPRTSSQTNCPEAESPRPSQLSVSVGTGPTNGSRGTLEPGGPLG
LEKPQLSGSEKGALDLSLLSLESEAATRQWLKGQQGVHVPPLGNRLPYHPPTLSSLRALS
NLLLHKKALEHKASSLVASGAAGALQTSLELVRRQLQDNPAYLLLKARFLAAFTVPALLA
TLAPHGIRTTLSVATRASSESEDEDLLSELDLENRDNWLGCASSRTQARPATTVPIQGAL
VSSEGAVPSHLDTFDDLDVLRTRHGRHARKQKPLL
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagatgctgaaagggagaaaataacaaaggagataaaggagctggaaaggatt
ttggatcccagctcctccaacatccatgtggaggtttcagaatcaagtcttgattcggat
tccgatgcagattcactgcccagtgaagacttggaagctgttgagcccccaatcctggaa
gaagaaaggtggggtgaggccagcaatgatgaggaagaccccaaggataaaaccctccct
gaagaccctgaaacttgtttacagctgaacatggtctatcaggaggtcatccaagagaag
ctggcagaggtcagcttgcttttggcccagaacagggagcaacaggaggagatcctatgg
gatctggctgggtccagaggccccagggtgaaggacggcaagagtctacccccaaacatg
tacatcggtcacttcatgaaaccgtacttcaaagacagggtcactggagtggggcctcct
gccaatgaagagacacgagagaaggctgctcagggaatcaaggctttcgaggagctcctg
gtgaccaagtggaagcactgggagaaagctttgctccgaaagtcagtggtgagtgaccgc
ctacagcgcctgcttcagcccaagttactgaagctcgagtacttgcgccagaagcagagc
cgggtctccagtgagtcagagcagcaggccctggagaagcaggttagggaggcagagaag
gagatccaggacatcaaccagcttccagaggaggccttgctggggaacaggctggacaac
cacgattgggagaagatttccaatatccattttgaaggaggccgcagtgcagaggagatc
cggaagttttggcagagctctgagcatccaagcatcaacaagcaggagtggagtgtcaag
gaggtggagcagctgagggccatcgcagctacgcatggccacctggagtggcacttagtt
gcagaggagctggggaccagccgcagcgccttccagtgcctgcagaaattccaggagcac
aacaaagccctgaagcgcaaggagtggacagaggaggaggaccgcatgctcacccagctg
gtgcaggagatgcgtgttgggagccacattccctatcgcagaattgtctactacatggag
ggcagagactccatgcagctgatttatcggtggaccaagagcttggatcccagcctgaaa
aaggggttctgggccccagaggaagatgctaaactgcttcaagctgttgccaaatatggg
gagcaggattggtttaaaatccgggaagaggtgccaggtaggagcgatgcccagtgcaga
gatcgatatctcagaagattacattttagtttgaaaaaggggcgatggaatgcaaaagaa
gaggagcagttaattgaattaatagaaaaatacggtgttggtcactgggcgaaaatagct
tctgaactaccccatcgctcaggctcccagtgtctaagcaagtggaaggtcatggctggg
aagaagaagagtctccggaggaggcgacggcggccctgtcgcagagtccgctggagctcc
gatagcagcagcagctgtagcactggaggtggcggcagcagcagcagcagtagcagcagc
agcagcgaggacccagagacagagctagaggaaccccggaagggcctcagagggccactg
tccccaaagtacacagtgccagacatggacctgtgggtccctgccaggcagaacaccagc
cagctgcagaggggaggggctgggggctgctcaggacaccctgctgccttcactggccct
tctaaggagtttgatgctacccaaggttgcagtagggaagcttccagcacagccttggct
cctcaggaattgaaccagagagaggcccctaccgggatccacagccccgtcccgagaggt
gtccaagacccacacttggcagaccctcacccagcaagcctggaggagccagcctctgag
ggtggacagcatctgctgaaagtacccctgatgacagtacagaaggtgctgaggaccagt
atggccgtccagaaccgcacactgaaggagaggctgaggcagccgtccccacctgactca
cccccagggcctggccctggtgacggcatggctgggccttacctatggcagctgaggcat
ggaaccttccagaatggacagcagcaccggagacataatctgcaccggaggctcctcgag
cgtagacttctgttggctgtgacaccatgggtgggtgatatcgccctgccctgcgcacag
gtcccccccaggcctgcagctgtgcacactagagctaacaccatcagaatgcagttagag
cccacccggctggccagcaccccagtgttcacgctgctgattcagctgttgcagatcgac
actgctggctgcctggatgttgttcgtgagaggaagacccagccacccacatcactccag
tctggcacccagggcctgccaccacatcttctgcaggctccctcctgtgcccagagcacc
ccaggatgccccttcccaaatgtgccaacccggaatgctacaaagagtgccagccacaga
gggagcacaggacaggagtcctgccaggccaactccacctcaccccaagtgcctgtggcg
gccccacgcggtccccgacccaagcctaagactgtatcagagctgcttcgggagaagcgg
ctccgtgaggctcgtgccaggagggccacccagggcccaactcttcctccccagctgctg
gtctcccctgtgacccttgggccccctgtgctgccagcccctcagcctcagggttcccca
gccacaggtcctgtctccagtacagactgctttgggcctagggcccccatggcagccagt
gcatgcccgtctggctgttggcaggagactggggtttcagacaaggacgagggactcccc
accctacaagccttgcctctcagtcccgccccaagccctggccaagtccccgtgggctgc
cctctgagcattctgggacagtctcaggcccctaccacatcccggaagcagggcctacct
gaggttctgccctttttccccgcagcgcccagccccactcaactgcccatgcagcccctc
aacctgacgcctgctctgggcacacacagaagtgggacccccctggcagccagcatcccc
ttgcctgtcacctgggtgctcacagcccaggggctgctccctctgccagtaccagcagtg
gtgggcctccctggtcccacagggctacctgtgaaactcccaccaccctgctgtgaggct
cctgcttgcccctcacagcccaaggccagtgtggacacagagccagccccctcttccagg
actgacacctcagctcccccaacttgccccctatcccagagtcctctagaagtcggtggt
aatgttcctggcgctcttggagaggcccaggtggtcaaggaggctgcagtgccaaggacg
tcttcccagaccaactgccctgaagcagagtccccccggcccagccagctctctgtttct
gttggcactggtcccacaaatggctcaagagggacactggagcctggggggcctctgggt
ctagagaagccacaattgtctgggtccgagaagggggccttggatctgagcctgctctcc
ctggagagtgaggcagccacacggcagtggctaaagggacagcaaggggttcatgtgccc
ccactggggaacaggctaccctaccatccccctaccctgtccagcctacgagcactgtcc
aacctcctgctccacaagaaggccttagagcacaaggcctcctccctagtggccagtggg
gcagctggggcgctgcagacctcgttggagctggtgcggaggcagctgcaggacaaccca
gcctaccttttgctgaaggcacggttcctggcagccttcacagtgcctgctctcctggcc
accctggccccccatggcatccgtaccaccctgtcagtggccacaagagccagctctgag
agtgaggatgaggacctcctgagtgagctggaccttgaaaacagggacaactggttaggc
tgtgcatccagtagaacacaggcaaggccagcaaccacggtccccatccagggagctctg
gtttctagcgagggtgctgttccctcccacttggatacctttgatgaccttgatgtgctc
aggaccaggcatggccggcatgcccggaagcagaagcccctgctgtga
DBGET
integrated database retrieval system
