Marmota marmota marmota (Alpine marmot): 107159286
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Entry
107159286 CDS
T09644
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X5
KO
K10779
transcriptional regulator ATRX
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107159286 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107159286 (Atrx)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107159286 (Atrx)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107159286 (Atrx)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107159286 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107159286
NCBI-ProteinID:
XP_015361346
Ensembl:
ENSMMMG00000013466
LinkDB
All DBs
Position
Unknown
AA seq
2485 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSIDKTSGSANNPDTMENN
KEEGTSSSEKSKPSGSSRSKRKPSVVTKYVESDDEKPLDETLNEDVSNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKID
SEKSTKVCEHAPRFSPKKNTSNCNGEEKKLDDSCSGSVTYNYSALTVPKEMIKKAKKLIE
TTANMNSSYVKFLKQATDNSEISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALD
AVSKEKNTKEHKVVDAKSETKVRKGEKIFALERKDISKSDGKLSRKQVDNEHMDQSIPIE
EQRANKSTSGEHKKSDRKEEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLETAMEVQSS
TDFQGDGNSGTEQELESSSVKLNTPSKDNRGGIKSKSTAKVTKELYVKLTPVSLSNSPVK
GADCQEVPQDKEGPKSSGLNPKSEKCGPGQENADNEHLTENEVPLLLEESDLRRSPRVKT
TPLRRQTETNPATSNSDEESNEVVKGKQKLSVPIRKKDKRNSSDSAIDNPKPNKLPKSKQ
SEIVDQNSDSDEMLAILKEVSSRMSHSSSSDTDINETQTNHKTLYDLKTQKGKDDKGKRK
RKSSTSGSDFDIKKGKSAKSSIISKKKRQNQSESSNYDSELEKEIKSMSKIGAVRTTKKR
FSNRKDYDSSEDEKNSKKGMDNQGQKSLKTSQEGSSDDAERKQNFSSAESTIEKDKTIVE
LRDRLSKKQQPSVSSDVADKPSSGKEESLNSLEDKKVVETKEKSKHLRTKTCKKVQSGLS
DVADKFPKKEQSDDSSEEDKKQNKKGTEEKEKTIDLKKKVMKIERHYESSSDGTEKLPEG
EESCHFPKGLKQSKSDTTDGEKKGKKMKDKISKKKDELSDNVEKVPGKGDSCDSSEDKKS
KNRASDREKKRRNLPEKSSRKRQDFSSSDTEKCSMKQDGCDSSDKKPKRIELRERRNLNS
KRNTKEIQSGSSSSDAEESSEDNKKQKKQRASAKKKAGNVKEKKRNPLRTSNKRKQADIT
SSSSDVGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALCKSVPVTVDDDD
DDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEGGKKRTGKQNEENPGDEEAKNQVNS
ESDSDSEESKKPRYRHKLLRHKLTVSDGESGEDKKTNPKENKDVKGKNRRKVSSEESEES
DFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKIQEDSSSENKSHS
EEEVKEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIA
EREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGV
QFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCEKLDFSTALVVCPL
NTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRN
LAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTG
TPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILY
EMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSNEGGRGKA
GAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYT
KKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNMDEAGNNPSVSLKLEDSK
ATSSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISL
DLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETN
VRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLA
QGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRD
TPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTM
RFNIPTGTNLPPVTFNAQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRI
QPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQR
ILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGM
QPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7458 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctggcacactcatcagaagaatctgaagaaacaagttctcctccacgacttgtgatg
aaccaaagcattgataaaaccagtggttctgcaaataaccctgatacgatggaaaataac
aaggaagagggaaccagctcttcagaaaaatccaagccttcaggatcatcacgatcaaag
aggaaaccttcagttgtaacaaagtatgtagaatctgatgatgaaaaacctttggatgaa
acactgaatgaagatgtttctaatgaaaattcagaaaatgatattactatgcaaagtttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatggaattgtgagctgcacagcttgtggacagcaggtcaatcatttt
caaaaagattccatttatagacacccttcactgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtaga
tggtgtgcagaaggcgggaacttgatttgttgtgacttttgccataatgccttctgtaag
aaatgcattctccgtaaccttggtagaaaggagctgtctaccataatggatgaaaacaac
caatggtattgctacatttgtcacccagagcctttattggacttggtcactgcatgtaac
agtgtatttgagaacttagagcaattgttgcaacaaaataagaagaagataaaaattgac
agtgaaaagagtactaaagtatgtgaacatgcacccagattttctccaaagaagaatact
tcaaattgcaatggagaagaaaagaaattagatgattcgtgttctggctctgtaacctac
aattattcagcactaactgtgcccaaagagatgattaaaaaggcaaaaaaactgattgag
accacagccaacatgaactccagttatgttaagtttttgaagcaggcaacagataattca
gaaatcagttctgctacaaagttacgtcagcttaaggcttttaaatctgtgttggctgat
atcaagaaggctcatcttgcattagaggaagatttgaattcagagattcaagctttggat
gctgtaagcaaagagaaaaataccaaagagcataaagttgtagatgctaagtcggaaaca
aaagtacgaaaaggagaaaaaatctttgctttggaaaggaaggatatttcaaagtcagat
ggtaaactgtccagaaaacaggtagataatgagcacatggatcagagtatcccaatagag
gaacaaagagcaaataaaagtaccagtggtgagcataagaaatctgataggaaagaggaa
cctcagtatgaacctgctaatacttctgaagacttagacatggatattgtgtctgttcct
tcctcagttccagaggatatttttgagaatcttgagactgccatggaagttcagagttca
actgattttcagggggatggcaatagtggaactgagcaagaattggagagttcgtctgta
aaattaaatactccttcaaaagacaacagaggaggtattaagtcaaaaagtacagctaaa
gtaacaaaggaattatatgttaaactcacccctgtttccctttctaattccccagttaaa
ggtgctgattgccaggaagttccacaagataaagaaggccctaaaagttctggtttgaac
cccaagtcagagaaatgtggacctggacaggaaaacgccgacaatgagcatttaactgaa
aatgaagtccctttacttttagaagaatctgatcttcgaagatccccgcgtgttaagact
acacccttgaggcgacagacagaaaccaaccctgcaacatctaattcagatgaagaaagt
aacgaagtagttaaggggaaacaaaaactatcagttccaatcaggaaaaaggacaagcga
aattcttctgacagtgctatagataatcctaagcctaataaattgcctaagtccaagcaa
tcagagattgtggatcaaaattcagattctgatgaaatgttagcaatcctcaaagaggta
agcagcaggatgagtcacagttcttcttcagatactgatattaatgaaactcagacaaat
cataagactctgtatgatttaaagactcaaaaagggaaagatgataaaggaaaaaggaaa
cgaaaaagttctacttccggctcagattttgatattaaaaaaggcaaatcagctaaaagc
tctataatttctaaaaagaaacgccaaaatcagtctgagtcttctaattatgactcagaa
ttagaaaaagaaataaaaagcatgagtaaaattggggctgtcagaacaaccaaaaaaaga
ttttcaaatagaaaagattatgattcttctgaagatgaaaaaaacagcaaaaaagggatg
gataatcaagggcagaagagtttgaagacttcacaggaaggatcatctgatgatgctgaa
aggaaacagaatttttcttcagcagaaagcacaattgagaaagacaagaccatagtggaa
ttaagagatcgactttctaagaaacagcaaccaagtgtttcttctgatgttgctgataag
ccttcttcagggaaagaggagagtttaaattccctagaagacaaaaaagtagttgaaact
aaagaaaagagcaagcatctgagaaccaaaacatgtaaaaaagtacagagtggcttatct
gatgttgctgataaattcccaaagaaagagcagagtgatgattcctctgaagaagataaa
aagcagaacaaaaaggggactgaagaaaaagaaaagactatagacttgaagaaaaaagta
atgaagatagaacggcattatgaatcatcatctgatggcactgagaaattacctgaggga
gaagaaagttgtcattttcctaagggcctaaaacaaagtaagagtgacacaactgatgga
gaaaagaaaggtaaaaaaatgaaagataaaatttctaaaaagaaggatgagttatctgat
aatgttgaaaaggtaccagggaaaggagatagttgtgactcttcagaagataaaaagagt
aagaatagagcatcagatagagagaagaaaagacgcaacttgcctgaaaagagttcaagg
aaaagacaagatttttcatcatctgatactgagaaatgttccatgaaacaagatggttgc
gactcttctgataagaaaccgaaaagaatagaattgagggaaagaagaaatttaaattca
aagagaaataccaaggaaatacaaagtggctcatcatcttctgatgctgaggaaagttct
gaagataataaaaagcagaagaaacaaagagcttcagctaaaaagaaggcaggcaatgtc
aaggaaaaaaagagaaaccccctaagaacaagcaataaaaggaagcaagcagacattact
tcctcatcatctgatgtaggagatgatgatcagaattctgtaggcgaggggagcagtgat
gaacagaaaattaagcctgtgactgaaaatttagtgctttcttcacacactggattttgc
caatcttcaggagatgaagccttatgtaaatcagtgcctgtcacagtggatgatgatgat
gacgacaatgatcctgagaatagaattgccaagaagatgcttttagaagaaattaaagcc
aatctttcctctgatgaggatgggtcttcagatgatgaaccagaaggagggaaaaagaga
actggaaaacaaaatgaagaaaacccaggagatgaggaagcaaaaaatcaagtcaattct
gaatcggattccgattctgaagaatctaaaaagccaagatacagacataagcttttgagg
cacaaactgactgtgagtgatggagaatctggagaagacaaaaagacaaaccctaaagag
aataaagatgtcaaaggcaaaaatagaaggaaggtgagcagtgaagagtcagaagagtct
gattttcaggagtcaggagttagtgaagaagttagtgaatctgaagatgaacagcgacct
agaacacggtctgcaaaaaaggcagaattggaagaaaatcaacggagttataaacagaaa
aagaaaagacgacgcattaagattcaagaagattcatccagtgaaaacaagagccattct
gaagaagaagtcaaagaagaagaggaggaagaggaagaggaggaagaagatgaaaatgat
gattctaagtctcctggaaaaggcagaaagaaaatccggaagattcttaaagatgataaa
ctgagaacagaaacacaaaatgctttgaaagaagaggaagagaggcgaaaacgtattgct
gagagggagcgtgagcgagagaaattgagagaggtgatagaaattgaagatgcttcaccc
accaagtgtccaataacaaccaaattggtcctagatgaagatgaagaaaccaaagaacct
ttagtgcaggttcatagaaatatggttatcaaattgaaaccccatcaagtagatggtgtt
cagtttatgtgggattgctgttgtgagtctgtgaaaaagacaaagaaatctccaggttca
ggatgcattcttgcacattgcatgggacttggtaagactttacaggttgtaagttttctt
catacagttcttttgtgtgagaaattggattttagtacagctttagtggtttgtcctctt
aatactgctttgaattggatgaatgaatttgagaagtggcaagagggattaaaagatgat
gagaagctcgaggtctctgaattagcaactgtgaaacgtcctcaggagagaagctacatg
ctgcagaggtggcaagaagatggtggtgttatgatcatagggtatgagatgtacagaaat
cttgctcaaggaaggaatgtgaagagtcgtaaacttaaagaaatatttaataaagcttta
gttgatccaggccccgactttgttgtttgtgatgaaggccatattctaaaaaatgaagca
tctgctgtttcaaaagctatgaattctatacgatcaaggaggaggattattttaacagga
acaccgcttcaaaataacctaattgagtatcattgtatggttaactttatcaaggaaaat
ttgcttggatccattaaggagttcaggaatagatttataaatccaattcaaaatggtcag
tgtgcagattctaccatggtagatgtcagagtgatgaaaaaacgtgctcacattctctac
gagatgttagctggatgtgttcagaggaaagattatacagcattaacaaagtttttgcct
ccaaaacatgaatatgtgttagctgtgagaatgactcctattcagtgcaagctttatcag
tactacttagatcacttaacaggtgtaggtaatagtaatgaaggtggaagaggaaaggca
ggtgcaaaacttttccaagattttcaaatgttaagtagaatctggactcatccttggtgt
ttgcagctggactacatcagcaaagaaaataagggatattttgatgaagatagtatggat
gaatttatagcttcagattctgacgaaacttccatgagtttaagctccgatgattataca
aaaaagaagaaaacaaaggggaagaaggggaaaaaagacagtagctcaagtggaagtggc
agtgacaatgatgttgaagtgatcaaagtttggaattcaagatctcgaggaggtggtgaa
ggaaatatggatgaagcaggaaacaacccttcagtttctttaaagctggaagatagtaaa
gctacttcctcttctaatccaagcagcccagctccagactggtacaaagattttgttaca
gatgctgatgctgaggttttagagcattctggaaaaatggtacttctctttgaaattctt
cgaatggcagaggaaattggggataaagttcttgttttcagccagtcactcatatctctg
gacttgattgaagattttcttgaattggctagtagagagaaaacagaagataaagacaaa
cctcttatttataaaggtgaggggaaatggcttcgaaatattgactattaccgtttagat
ggttctactactgcacaatcaaggaagaaatgggctgaagaatttaatgatgaaactaat
gtgagagggcggttgtttatcatttccaccaaagcaggatcccttggaattaatctggta
gctgctaatcgagtaattatatttgatgcttcttggaatccatcttatgacatccagagt
atattcagagtttatcgctttggacaaactaagcctgtttatgtgtataggttcttagct
cagggaaccatggaagataagatatatgatcggcaagtaactaagcagtcattatctttt
cgagtcgttgatcaacaacaggttgagcgccattttactatgaatgagcttactgaactt
tatacttttgagccagacttattagatgaccctaattcagaaaagaagaagaagagggat
actcccatgctgccaaaggatactatacttgcagaacttcttcaaatacataaagaacac
attgtaggatatcatgaacatgattctcttttggaccacaaagaagaggaggagttgact
gaagaagaaagaaaagcagcttgggctgaatatgaagcagaaaagaagggactgaccatg
cgtttcaacataccaactgggaccaatttaccccctgtcactttcaacgctcagactcct
tatattcctttcaatttgggagccctgtcagcaatgagtaatcaacagctggaggacctc
attaaccaaggaagagaaaaagttgtagaagctacaaacagtgtgacagcagtgaggatt
cagcctcttgaagatataatttcagctgtttggaaagaaaacatgaatctctcagaggcc
caagtacaggcattagcattaagtagacaagccagccaggagcttgatgtaaaacgaaga
gaggcaatctacaacgatgtactgacaaaacaacagatgttaatcagctgtgttcagcga
atactgatgaacaggaggctccagcagcagtacaatcagcagcaacagcaacaaatgact
tatcagcaagcaacactaggtcacctcatgatgccaaagcctccaaatttaatcatgaat
ccttctaactaccagcagattgatatgagaggaatgtatcagtccgtggctggtggtatg
cagccaccacccttacagcgagcaccacccccaatgagaagcaaaaatccaggaccttcc
caagggaaatcaatgtga
DBGET
integrated database retrieval system
