Marmota marmota marmota (Alpine marmot): 107159518
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Entry
107159518 CDS
T09644
Name
(RefSeq) LOW QUALITY PROTEIN: occludin-like
KO
K06088
occludin
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03272
Virion - Hepatitis viruses
mmma04514
Cell adhesion molecules
mmma04530
Tight junction
mmma04670
Leukocyte transendothelial migration
mmma05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
107159518
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107159518
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107159518
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
107159518
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
107159518
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmma01009
]
107159518
Protein phosphatases and associated proteins [BR:
mmma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107159518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Cation_ATPase_C
Laminin_II
FapA
Swi5
TMF_TATA_bd
GAS
Motif
Other DBs
NCBI-GeneID:
107159518
NCBI-ProteinID:
XP_048640246
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MSSRPFESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIMMCIAIFACVASTLAWDRGYGTGLLGGGFGYPYGGSSFGGYGGSYGY
GYGYGYGYGGGYTDPRAAKGFLLAMAAFCFIASLAIFVTSVIRSEISRTRGYYLTVIIVS
AILGILVFIATIVYIMGVNPTAQASGSLYSSQIYALCNQFYTPAVTGVYVDQYLYHYCVV
DPQEAIAIVLGFMIIVAFALIIFFAVKTXRKMDWYDKSNILWDKEHIYEEQPPNVEEWVK
NVSAGTQDIPPPPSDYVERVDSSMVYSSNDKVNGKRSYPESSYKSTPPVHEVAQELPLTS
PMDDFRQARYSSSGNLETPSKRAPTKGRAGKPKRTEQDHYETDYTTGGESCDELEEDWIR
EYPPITSDQQRQLYKRNFDTGLQEYKSLQAELDEVNRELSHLDKELDDYREESEEYMAAA
DEYNRLKQVKGSADYKRKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaggccttttgaaagtccgcctccttatagacctgatgaattcaaaccgaat
cattatgcaccaagcaatgacatatatggtggagaaatgcatgttcggccaatgctctct
cagcctgcgtattctttttacccagaagatgaaattcttcacttctacaaatggacatct
cctccaggagtgattcgtattctgtctatgctcgttattatgatgtgtattgctatattt
gcctgtgttgcctccacacttgcctgggacagaggctatggaactggcttactaggaggt
ggttttggctacccttatggaggaagtagctttggtggctatggaggcagctatggctat
ggttatggctacggttatggctatggaggaggctatacggatccaagagcggcaaagggc
ttcctgttggccatggctgccttttgtttcattgcctcattggcaatatttgttaccagt
gttataagatctgaaatatccagaacaagaggatattacttgactgtgataatagtgagt
gctatcctaggtatcctggtgtttattgccacaattgtctatataatgggagtcaaccca
actgcccaggcttctggatctttatatagttcacaaatatatgccctctgcaaccagttc
tatacacctgcagttactggagtctatgtggatcagtatttgtatcactactgtgtggtg
gatccccaggaggctattgccattgtgctaggattcatgattattgtggcttttgcttta
ataattttctttgctgtgaaaacttgaagaaagatggactggtatgacaagtccaatatt
ttgtgggacaaagaacacatttatgaggaacagccacccaatgtggaagaatgggttaaa
aacgtgtctgcaggcacacaagacatacctccacccccatctgactacgtggagagagtc
gatagttccatggtgtactcttccaatgacaaagtgaatggtaagcggtcatatccagag
tcttcctataagtcaacaccaccggtgcatgaagtggctcaggagcttcccctcacttca
cccatggatgacttcagacaggctcgatacagcagcagtggtaacttagagacaccttca
aaaagggctcccactaagggaagagcaggaaagcccaagagaacagagcaagatcactat
gagacagactacacgacgggtggagaatcctgtgatgagctggaggaggactggatcagg
gaatatccacccatcacttcagatcaacaaagacaactttacaagcgaaattttgacact
ggcctgcaggaatacaagagcttacaagcagaacttgatgaggtcaatagagaactctct
catctagataaagaattggatgactatagagaagaaagtgaagagtacatggctgctgct
gatgaatacaatagactgaagcaagttaagggatctgcagattacaaaagaaagagaaat
tactgcaaacagttgaagagtaaattgtcacacatcaagaagatggttggagactatgat
agacggaaaacttag
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