Marmota marmota marmota (Alpine marmot): 107159521
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Entry
107159521 CDS
T09644
Symbol
Trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107159521 (Trim16)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107159521 (Trim16)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107159521 (Trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
107159521
NCBI-ProteinID:
XP_015361597
Ensembl:
ENSMMMG00000002750
UniProt:
A0A8C5YR05
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MTELDLMAPGPLPGVTAHPLAPLSSDSGSVSPTEEEDLGSPGRAVEETEGEGSSSAESGA
PGEDGEEDILCDFCLGTSKVKAVKSCLTCMVNYCEEHLRPHQENSKLHSHQLTEPSKDRD
LPTCSAHHSPLVAFCCSDQQCICQECGQDEHKDHTTVSLDAARRDKEAELRSTQLDLEQK
LKLNENAIARLQANHKSVLVSVSEVKVVAEEQFGELLAAVRKAQADVMLFLEEKEQAALN
QANGIKTHLEYRSVEMEKSKQELERLAAISNTVLFLEEYCKFKNTEDTAFPSVYIGLKDK
LSGIRKVITDSTLHLIQLLENYKEKLQEFSKEEEYDIKTQVSAIVQRKYRTSKPEPKTRK
EFLQYAHDITFDPDTAHRYLRLQEDNRKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYL
HRYYFEIEISGAGTYFGLTCKGIDRKGEERNSCISGNNFSWSLHWNGKEFTAWHSDTETP
LKAGPFRRLGIYVNFPGGTLSFYGVEYDCMTLVHKFDCKFSEPVYAAFWLSKKENAIRIV
DLGEEPEKPALSSVEPAS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactggatctgatggccccagggccattgcctggcgtcactgctcaccctctg
gcccctctcagctcagattctgggtctgtcagccccacagaagaagaggatttgggctcc
cccgggagagctgtggaggagacagagggagagggcagctcctctgcagagtcaggggca
cccggtgaagatggggaggaggacatactgtgtgacttctgccttggaaccagcaaggtg
aaggcagtgaaatcctgtctcacctgcatggtgaattactgtgaggagcacctgcgtcct
catcaggagaacagtaagctgcacagccaccagctgactgagccatcaaaggaccgagac
ctacccacctgctctgcccaccacagccctctggttgccttctgctgcagtgaccagcag
tgcatttgccaggaatgtggccaggatgaacacaaggaccacactacagtctccctggat
gctgcccgcagagacaaggaggctgaacttcggtccacccagttagacttggagcagaaa
ctcaagttgaatgaaaatgccattgccaggcttcaagccaatcacaagtccgttttggtg
tcagtgtcggaggtgaaggtggtagctgaagagcagtttggggaactgcttgctgctgtg
aggaaggcccaggcagatgtgatgctcttcttggaggagaaagagcaagctgctctgaac
caggctaatggcatcaagacccacctggagtacaggagtgtagagatggagaaaagcaag
caggagctggagaggttggcggccatcagcaacaccgtcctctttttggaggagtactgc
aagttcaagaacacggaagacactgctttccctagtgtttacatagggctgaaggataaa
ctgtcaggcatccgcaaggtcatcacagactccaccctacacttaatccagctgttggag
aactacaaggaaaaactccaggagttctccaaagaagaggagtatgacatcaaaactcaa
gtttctgccatcgttcagcgcaagtatcggacctcaaaacctgagcctaaaaccaggaaa
gagttccttcaatatgctcacgatatcacatttgacccggacacagcacataggtatctc
cgactgcaagaggacaaccgcaaagtcaccaacaccacaccctgggaacatccctaccca
gacctccccagcagattcctgcactggaggcaggtgctgtcccaacagagtctgtacctg
cacaggtactattttgagatagagatctccggggcaggcacttactttggcctgacctgc
aaaggaattgaccggaaaggggaggaacgcaacagttgcatttctggaaacaacttctcc
tggagcctccattggaacgggaaggagttcacagcctggcacagtgacacagagacccca
ctcaaagctggccctttccggaggcttgggatctatgtcaacttcccgggagggaccctt
tccttctatggtgtagaatatgattgcatgacgctggttcacaagtttgactgcaaattt
tcagagccagtctatgcggccttctggctttccaagaaagaaaatgccatccggattgtg
gatctgggagaggaacctgagaagccagcgctgtcctcagtggagcctgcttcttag
DBGET
integrated database retrieval system
