Marmota marmota marmota (Alpine marmot): 107159553
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Entry
107159553 CDS
T09644
Symbol
Pcdh11x
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107159553 (Pcdh11x)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmma01009
]
107159553 (Pcdh11x)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107159553 (Pcdh11x)
Protein phosphatases and associated proteins [BR:
mmma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107159553 (Pcdh11x)
Cell adhesion molecules [BR:
mmma04515
]
Cadherins
Protocadherins
107159553 (Pcdh11x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Drf_FH1
DUF6377
Motif
Other DBs
NCBI-GeneID:
107159553
NCBI-ProteinID:
XP_015361626
Ensembl:
ENSMMMG00000003383
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MPENVLIGDLLKDLNLSLIPDKSLTSPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDR
EKLCAGIMMDAHCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSA
INSRYALPAAIDPDIGINGVQNYQLIKGQNIFGLDVIETPEGDKMPQLIVQKELDREEKD
TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKEKEIEVSIPENAPVGTSVTQLHA
TDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKLLVLASDGG
SVPARAMVLVNVTDINDNVPSIDIRYIINPTNGTVVLSENAPLNTKVALITVMDKDADHN
GRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLL
VKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLLGTDAPSEF
NLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPIFTHN
EYNFYVPENLPRHGTVGLITVTDPDYGENSAVTLSILDVNDDFTIDPQTGVIRPNISFDR
EKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPPSNYSYELVLPSTNPGT
VVFKVVAIDNDTGMNAELHYSIVGGNTKGLFVIDQTTGNITLKEKCVVADLGLHRLVVKA
KDLGQPDSLFNVVIVNLFVNATVTNATLIHELVRKSIEAPATQNIETADTSSPTSDYVKI
MVAIVAGTITVILVIFITAVVRCRQPPHLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKK
KKKKHAPKNLLLNFVTIEETKADDADNDGNSVTLDLPIELEEQTMGKYNWGTTPTTFKPD
SPDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSV
SECSYPVTTFKTPVSVHTRPPMKEVVRSRTPMKEPTTVEIWTHPQPQRKSEGKKAGKSQR
RVTFHLPEGSQESNSDGGLGDHDAGSLPSTSHALPLGYPQEEYFDHAAPNNRTEGDGNSD
PESTFIPGLKKAAEITVQPTVEEASDNCTQECLILGHSDACWMPASLTHSSPSQAQTSAL
CHSPPLTQASAHRRSPPVTQTIALCHSPPVTQAIALCHSPPTVQASALHHSPPLAQATGL
HHSPPPTQASALRYSPPLAQATAIRRSPPLPQAASLHRSQVQPPMGLQQGWVQGAGADGL
HSLDQGVQGSARSQFYTMSERLHPNDDSIKVIPLTTFTPGQQARPSRGDSPIMEEHPL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaacgtcctgataggcgacttgttgaaagacctcaatttgtcgctaattccc
gacaagtccttaacgtctccaatgcagttcaagctcgtgtacaagacaggggatgtgcca
ctgattcgtattgaagagggtactggtgagatcttcactactggcgctcgcattgatcgt
gagaaattatgtgctggtatcatgatggatgcccattgcttttacgaagtggaggttgct
gttttgccggatgaaatatttagactggttaagatacgttttctgatagaagacataaat
gataatgcaccgttattcccagcgacggttatcaacatctcaattccagagaattcggct
ataaactctcggtatgctctcccagcggccattgatcctgacataggaataaatggagtt
caaaattaccaactaattaagggtcaaaatatttttgggcttgatgtcatagagacacca
gaaggagacaagatgccacaactgattgttcaaaaggagttagatagggaagagaaggat
acctatgtaatgaaagtaaaggttgaagatggtggctttcctcaacgatccagtactgct
attttgcaagtaagtgttgctgatacaaatgacaaccaccctgtgttcaaggagaaggaa
attgaagttagtataccagaaaatgctcctgtaggaacttcagtgacacaactccatgct
acagatgctgacataggtgaaaatgccaagattcacttctatttcagcaatctagtctcc
aatattgccaagagattatttcaccttaacaccaccactggactcatcacagtcaaagaa
cccctggatagagaagaatcaccaagtcataagttactggttttggcaagtgatggtgga
tcagtgccagcaagagcaatggtcctggtaaatgttacagatatcaatgataatgtccca
tcaattgatataagatatattatcaatccaaccaatggcactgtggttctttcagaaaat
gctccacttaacaccaaagttgctctcattactgtaatggataaggatgccgaccataat
ggtagagtgacatgcttcacagatcatgaagttcctttcagattaaggccagtattcagt
aatcaattcctcctggaaactgctgcatatcttgactatgagtccacaagagaatatgcc
attaaattactggccgcagatgctggcaaacctcctttgaatcagtcatcaatgcttctc
gtcaaagtgaaagatgaaaatgacaatgctccagttttcacccagcccttcataagtctt
tctgttcctgagaataactcccctggcacacagctgaccaaaataagtgcaacagatgca
gacagtggacgtaatgctgaaatcagttaccttctaggtactgatgccccatctgaattc
aacctggatcatcgaacaggcattctgactgcagtgaaaaaattagatagagaaaaacag
gaaaaatattatttcactgttctggcaaaagataatgggatgccaccattaatgactaat
gccacagtcttagtaaccgtccttgatcagaatgataacagcccaattttcactcacaat
gagtacaacttctatgtcccagaaaaccttccaagacatggcacagtaggcctaatcacc
gtaactgatcctgattatggagagaattctgcagtcactctctccattttagatgtgaat
gatgacttcaccattgacccacagactggtgtcattaggccaaatatttcgtttgatcga
gaaaaacaagaatcttacactttttatgtaaaggcagaggatggtggtagggtatcacgc
tcttcaactgcaaaagtaaccataaatgtagttgatgtcaatgacaacaaaccagtgttt
gttgtccctccttccaactattcttatgaactggttctcccatccactaatccaggcaca
gtggtctttaaggtagttgccattgacaatgacactggaatgaatgcagagcttcactac
agcattgtaggaggaaacacaaagggactgtttgtaattgaccaaacaactggcaacatc
acactgaaggagaaatgtgtggttgcagatcttggtttacacagattggtagttaaagct
aaagacttaggacaacctgattctctcttcaatgttgtaattgtcaatctgtttgtgaat
gcgacagtgaccaatgctacactcattcatgaattggtgcgcaaaagcattgaagcacca
gcgacccaaaatattgagacagctgatacatcctcaccaaccagtgactatgtcaagatc
atggttgccattgttgctggcactataactgttatactagtgattttcatcactgctgta
gtaagatgtcgccaaccaccacaccttaaggctgctcagaaaaacaagcagaattctgaa
tgggttactccaaacccagaaaacaggcagatgataatgatgaagaaaaagaagaagaag
aagaagaagaagcatgcccctaagaacttgctgcttaactttgtcactattgaagaaaca
aaggcagatgatgctgacaatgatggaaacagtgtcacactagaccttcccattgaactg
gaagagcaaaccatgggcaaatacaactggggcactacgcctaccaccttcaagcctgac
agccctgatttggcccgacactacaaatctgcctctccacagccagccttccagattcag
cctgaaacgcccctgaattcaaagcaccacatcatccaggaactgcctcttgataacact
ttcgtggcctgtgattccatctccaagtgttcctccagcagttctgatccctacagtgtt
tctgagtgcagctatccagtgacaaccttcaagactcctgtgtctgtacacaccagaccg
ccaatgaaggaggttgtaagatctcgcacccccatgaaagagccaacaactgttgaaatc
tggactcatcctcaaccacagcggaaatccgaggggaaaaaggcaggaaagtcccagcga
cgtgtcacatttcacctaccagaaggctctcaggaaagcaacagtgatggtggactggga
gatcatgatgcaggcagccttcccagcacatcccatgctctgccccttggctatcctcag
gaggagtactttgatcatgctgcacccaacaaccgtactgaaggagatggcaactctgat
cctgaatctactttcattcctggattaaagaaagctgcagaaataactgtgcaaccaact
gtggaagaggcttctgacaactgcactcaagaatgtctcatcttgggccattctgatgcc
tgctggatgccagcttctctgacccattccagcccttcacaggcacagacctctgctcta
tgccacagcccacccctgacacaggcatctgctcaccgccgcagccctccagtgacacag
accattgctctctgccacagtcctccagtgacccaagctatcgctttgtgccacagtcct
ccaacagtacaggcctctgctctccaccacagtcctcctctagcacaagccactggactt
caccacagcccaccccccacacaggcctcagccctccgttacagccctcccttggctcag
gctactgcaattcgccgcagcccgcctctgccacaggctgcctctctccaccgcagccaa
gtccagccaccaatgggtttgcagcaaggttgggtgcaaggtgctggagctgatggactg
cattctcttgatcagggagtgcaaggtagtgctagatctcagttttacactatgtctgaa
agacttcatcccaatgatgattcaattaaagtcattcccttgacaaccttcacaccaggc
caacaggccagaccctctaggggtgattcccccattatggaagaacatcccttgtaa
DBGET
integrated database retrieval system
