KEGG   Marmota marmota marmota (Alpine marmot): 107159645
Entry
107159645         CDS       T09644                                 
Symbol
Polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03410  Base excision repair
mmma05166  Human T-cell leukemia virus 1 infection
mmma05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107159645 (Polb)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    107159645 (Polb)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    107159645 (Polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107159645 (Polb)
Enzymes [BR:mmma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107159645 (Polb)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107159645 (Polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     107159645 (Polb)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 HHH Cdd1 NTP_transf_2
Other DBs
NCBI-GeneID: 107159645
NCBI-ProteinID: XP_015361723
Ensembl: ENSMMMG00000004558
UniProt: A0A8C6EP17
LinkDB
Position
Unknown
AA seq 335 aa
MSKRKAPQETLNGGITDMLMELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEYLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPNFTSESTKQPKLLHRVVEQLQKVHFITDMLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSERDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagtaaacggaaggcgccgcaggagactctcaacgggggaatcacggacatgctcatg
gaactcgcaaactttgagaagaacgtgagccaggctatccacaagtacaatgcttacaga
aaagcagcatctgttatagcaaagtacccacacaaaataaagagtggagcagaagctaag
aaattgcctggagtaggaacaaaaattgctgaaaaaattgatgagtatttagcaactgga
aaattgcgtaaactggaaaagattcggcaggatgatacaagttcatccatcaatttccta
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaggatctcagaaaaaatgaagataaattgaatcatcatcaacgaattgggctg
aaatactttgaggactttgaaaaaagaatccctcgtgaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggtgcagaatctagtggtgacatggatgttcttctgacccatccaaacttt
acctcggaatcaaccaaacagccaaagctgttacatcgtgttgtggagcagttacaaaag
gtccattttattacagatatgctatccaagggggaaacaaagttcatgggtgtttgccag
cttcccagtaaaaatgatgaaaaggaataccctcacagaagaattgatatcaggttgata
cccaaagatcagtattattgtggggttctttatttcactgggagtgacattttcaataaa
aatatgagagctcatgccttagaaaagggtttcacaatcaacgaatacactatccgcccc
ttgggagtcactggagtagctggagaacccctgccagtagacagtgagagagacatcttt
gattacattcagtggaaataccgagaacccaaggatcgaagtgaatga

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