Marmota marmota marmota (Alpine marmot): 107159694
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Entry
107159694 CDS
T09644
Symbol
Usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107159694 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107159694 (Usp39)
Spliceosome [BR:
mmma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107159694 (Usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
107159694
NCBI-ProteinID:
XP_015361785
Ensembl:
ENSMMMG00000008203
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MIFLLAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQ
GRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIAN
LDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKR
PPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSRKTFQITKQGDGVDFLS
WFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMV
ESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLT
KLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIV
HDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDAGETNQQG
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgattttccttttagcaaagaatggtcgcgtggattctgaggatcggaggagccgccac
tgcccatatctggataccattaacaggagtgtgttggactttgactttgagaaactgtgc
tctatctccctttcacatatcaatgcatatgcctgtctggtgtgtggcaagtactttcaa
ggccgaggtttgaagtctcatgcctacatccacagcgtccagtttagccaccatgtcttt
ctcaacctccacaccctcaagttttactgccttccagacaactatgagatcatcgactcc
tccctggaggatatcacgtatgtgttgaagcccacttttacaaagcaacaaattgcaaac
ttggacaagcaagccaaattgtcccgggcgtatgatggtaccacttatctgccgggtatt
gtgggactgaataacataaaggccaacgactatgccaatgccgtccttcaggctctgtct
aacgttcctcctctccggaactacttcctagaagaagacaattacaagaacatcaagcgt
cctccaggggacatcatgttcttgttggtccagcgttttggagagctgatgagaaagctc
tggaaccctcgaaatttcaaggctcatgtctctccccacgagatgctccaggctgtggtc
ctctgcagcaggaagacctttcagatcaccaaacaaggagacggagtcgactttctctcc
tggtttctgaatgctctgcactcggccctggggggcacaaagaagaaaaagaagacgatt
gtgacggatgttttccaggggtccatgcggatcttcactaagaagcttccccatcctgat
ctgccagcagaagaaaaagagcagctgctgcacaatgatgagtaccaggagacgatggtg
gagtccacgttcatgtacttgacgctggaccttcctactgccccgctctataaggacgaa
aaggaacagctcattatcccccaggtgccgctcttcaacatcctggccaagttcaatggc
atcactgagaaggaatataagacttacaaggagaacttcctgaagcgcttccagctcacc
aagctgcctccctacctgatcttctgtatcaagaggttcaccaagaacaacttctttgtg
gagaagaaccccaccattgtcaacttccctatcacgaacgtggatctgagagaatatttg
tctgaagaggtccaggcagtgcacaagaacaccacctacgacctcatcgccaacattgtg
cacgacggcaagccctctgagggctcctaccgcatccatgtgctgcaccatggcactggc
aagtggtacgaactgcaggacctgcaggtgacggacatcctgcctcagatgatcacactg
tcagaggcctacattcagatatggaagaggcgggatgccggggagaccaaccaacagggg
gcgtga
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integrated database retrieval system
