Marmota marmota marmota (Alpine marmot): 107159795
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Entry
107159795 CDS
T09644
Symbol
Cnot6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X2
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107159795 (Cnot6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107159795 (Cnot6)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107159795 (Cnot6)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107159795 (Cnot6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107159795 (Cnot6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
107159795
NCBI-ProteinID:
XP_015361907
Ensembl:
ENSMMMG00000009896
UniProt:
A0A8C6ERV5
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSKEKYDSPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTKRLLNYLLDNLSGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLKSNALGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLINFSCNGKNGMTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaaaaatacgactctcctgaccctcggaggatgtacacaatcatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagcggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccgtagtttacccgcagaactcggaaacatggtatcactcagg
gagctccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctaaaaggaaatccacttacccaagatatattgaacctctat
caggaaccagatggaacaaaaaggctactgaattatttgcttgataatttgtcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcttggattatgttgcaagaacca
gatagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcatgggcactaaattgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatattataagtcttcaggag
gttgaaacagaacaatattacagtttttttctggtagaactgaaagaacgtggttataat
ggattctttagtcctaaatctcgagctaggacaatgtcagaacaagaaagaaaacatgtt
gatggctgtgcaatattcttcaagactgaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagcaatggcaaattcagaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaagccacatcttggaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtaaagttggtacaaactatgatgttcctc
tcagaagtaaagaacattattgataaagcttctcgaagtctcaaatccaatgcattggga
gaatttggaactattccacttgtgttatgtgcagatcttaattctttgcctgactctggt
gttgtagaatatttgagcactggtggagtagaaacaaatcataaagactttaaggaactg
agatataatgaaagtcttataaacttcagctgcaatgggaagaatggaatgaccaacgga
aggatcactcatggtttcaagttaaagagtgcctatgagagtggcctgatgccttacaca
aattacacatttgatttcaagggtataattgactacatcttctattctaaacctcaactg
aacactttaggcatcctgggacctctggaccaccattggctagttgagaataatatcagt
ggctgcccacacccacttatcccctccgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaagttaatggcattcaccttcctggcaggaggtag
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