Marmota marmota marmota (Alpine marmot): 107160059
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Entry
107160059 CDS
T09644
Symbol
Vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107160059 (Vps50)
Membrane trafficking [BR:
mmma04131
]
Protein recycling
Others
EARP complex
107160059 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
107160059
NCBI-ProteinID:
XP_015362210
Ensembl:
ENSMMMG00000020701
UniProt:
A0A8C6A464
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEETVSASEG
SNVMGTEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSINYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSSSSKTVTLFEQYCSGGNPFEIQASHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNTLWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccgacagggtctgaaaagccctcctgagagcctc
agtgatctcggtgctattgagagtctccgggtccctggaaaggaggaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagctaattaatagtattgaacaagta
tatttttctgcagactcatttgatattgtcagatatgagctggagaagctcccacctgtt
ctcaatttgcaagaattagaggagtatagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtgaaggaacttgaa
agagttacctcattgcagacaggtctccagttagctgcagttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcgaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagtacttttaaacattatagttgtataagt
gagctgaattcaaagctgcaagatactttagaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaagaattttgacattaatcattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagactgcaatggatcaacttcatatgcactttacccaagcc
attcacaatactgtgtttcaagttgtccttggttatgtggaattatgtgcaggaaacact
gatacaaaattccagaagctgcagtataaagatctctgtacgcatgtgacaccagacagc
tatattccgtgtcttgccgacctgtgtaaagcactgtgggaagtaatgctcagctattac
aggactatggaatggcatgaaaagcatgacagtgaggaaactgtttcagcttctgaagga
agtaatgtgatgggtactgaagaaaccaactttgatcgtggctatgtgaaaaagaagtta
gaacatggacttacacgaatatggcaggatgttcagctgaaagtaaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
ataagaaaacaaagcatcaactatttcaagaactaccatagaacacgacttgatgaactg
agaatgttcttagagaatgagacctgggaactttgtcctgttaagtcaaatttcagcatt
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcgcctagt
aagcagccagtctcatcttcttcgaaaacagttaccttgtttgagcaatactgtagtggt
gggaatccatttgaaattcaggccagccacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggaatatgacagtgac
agtgatgttcctgaggaactcaagcgagattatgtggatgagcagacaggagatgctcct
gtgaaaagtgtttctcgagaaaccctaaaaagtcggaagaaatcagattacagtctaaat
aaagtgaacgcacccatcttaacaaatacgacgttgaatgtaataaggcttgttgggaaa
tatatgcagatgatgaacattcttaagcctattgcctttgatgttatccatttcatgtct
cagctatttgattattacttatatgcaatatataccttttttggccggaatgattcattg
gaatcaacaggacttggtcttagtagtagtagattaagaacaactctcaacagaatccaa
gaaagccttattgatttggaagtttcagctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtacccagcccacacctcagtcaccttgtggttttgacatctggg
gattcattgtatgggttggcagaaagagtagtagccacggaatccctggtattcctggct
gaacagtttgaattccttcagccacatctggatgctgtgatgccagcagtcaaaaagccc
tttctgcagcagttttattctcagacagtctcaactgctagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccatcgattatgaacagatgctgctcctaatggctaat
gtgaaatgggacgtaaaagaaatcatgtcacagcataacatatacgtagatgcattgtta
aaggaatttgagcagtttaacagaaggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatacactttgggaacattgtatacgattggctaataggactattgtg
gaaggatatgccaacgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaacagatattagacccattcctgataaa
gaatttgtggaaacctatatcaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacaaaacagctgaccaatctggtgaatgtttgccta
ggatcccatatcaataagaaagcaagacagaaacttctagcagctatagatgatatagac
cgacctaaaagataa
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integrated database retrieval system
