Marmota marmota marmota (Alpine marmot): 107160238
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Entry
107160238 CDS
T09644
Symbol
Tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107160238 (Tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmma04812
]
107160238 (Tubgcp6)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
107160238 (Tubgcp6)
Cytoskeleton proteins [BR:
mmma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107160238 (Tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
SPEG_u2
Motif
Other DBs
NCBI-GeneID:
107160238
NCBI-ProteinID:
XP_015362377
Ensembl:
ENSMMMG00000007018
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MAGITQLFDDLCEALLPAAPARPGQRGVPRSRAKQTLKRVAYNALFTSLFQEETQQPQPD
LPKLPVRNKVLMLSFDLRVGGLGPEADRLEELVEGLEADPCCPLVELGSALDLLVQLAGS
GPPRTLRRKRDYFCHNRHAGRNVPYGGYDCCDLRLLEMDVQSLIASEEYSCHSMVQETLQ
VMEAAPGTGLPTVGLFSFGDPCGDRFERETRISIFGALVHSRTYDMDVRLDLPPVPDSAD
LSGLAIKVPQSVDQWEDEGFQSASNLTPDSQSEPSMTPDVDLWEAALTYEPSKRRCWERV
GCPPGHKEEPYLTEAGRDAFDRFCRLRQGELQALSGGLLQAPRPMLVKEQELVKDSLNVL
LGVVSATFSLCQLSQAFVVERGVHVSGASPESISSILSEVAEYGTCYTRLSHFSLQPVLG
ASCSRGLVFQAFTSGLRRYLQYYRACVLATPPTLSLLTIGFLFKKLGRQLRYLAELCGVG
TVLPGSSGGEPGDAFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWV
YSGVFRDVYGEFMIQVNHEYLGFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGK
TINLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARHSSISKEE
KELRMEIAKQELIVHAREAASRVLSELSDRQMSEQMALDARKREQFQRLKEQFVKDQERR
LAARQEELEDDFSYAREVRDREKRLTALEEELDRKARQALVDHYSKLSAEAARREQRALW
RIQRHRLESARLRFFLEDEKRVQEMLKNVAEACQPQELLGHLPGTCSQVNALLQVTSPGP
EHPDRGPTCNSAPTELHLAAWDCPGRPSVPTTQAIESPAVGAGGSGTRLAEGAEPFSAGL
SITDFLPLGPSAEQPVQTNRALPLEEALQTISSDLPAVSPGEAHATASTQPAQPQEYDFS
TVLRPAAATSPSSGPLQAVEGSLGPEEHAPWEGTHEGTQMALSPPLRHVTSEEGSNRPTG
QLHRHVSDASIRVGENMPDVAPSRPRWNVHGHVSDASIRVGENRPEAEPNPPWPHQSPPS
HVSQAGSSLEVQNPALEHGPQLPADMEPSICCPNVGSLQTLPSAASKSSTLGDSVSEEPG
AGKNGDNDDLSPSWPPNSQVGRTQPGEGSMQGAPHALFQHKPQGAWEQLLGGVPTLSLDS
QEGTAAPSSPEAAAEVEALRWGKEQAYVAGLASRYRLEQYPDSYESMSEAPAAHLVRHVL
PRAFAFPVDPRVQSAVDETTVQLTELLTLPVLMQRSLTAPLAAHVSLVNKAAVDYFFAEL
HLEAHFEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNCILSKALQYSLH
GDTPHATNLSFALKYLPEVFAPNAPDVLSCLELRYKVDWPLNIVITENCLSKYSGIFSFL
LQLKLMMWTLKDICFHLKRTALVSHAAGSVQFRQLQLFKHEMQHFVKVTQGYIANQILHV
SWCEFRARLATVGNLEEIQRAHAEYLHKAVFRGLLTEKAAPVMNIIHSIFSLVLKFRSQL
ISQAWGPASGPRGAEHPNFALMQQSYSTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRIN
FNSYYQDS
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggccggcatcacccagctgttcgatgacctgtgcgaggccctcctgccagcggccccg
gctcgcccgggccagcgcggcgtgccccggagcagggcgaagcagaccctcaagcgggtg
gcctacaatgcccttttcacgagcctgttccaagaggagactcagcagccgcagcccgac
ctcccgaagctccccgtgaggaacaaggtcctcatgctgtccttcgacctgagagtgggc
ggcctgggccccgaggctgaccgactggaggagctggtggaggggctggaggcagacccg
tgctgtccactcgtggagctggggtctgcgttggacctcctggttcagctggcagggagc
ggcccgccacgcaccctgcggagaaaacgggactacttctgccacaacaggcacgcgggc
cggaacgtcccctacggcggctacgactgctgcgacctgcggctgttggagatggacgtc
cagtccctgatcgccagcgaggagtactcctgtcacagcatggtccaggaaacgcttcaa
gtgatggaggctgctccaggcactggcctgcccaccgtagggctcttctcattcggtgac
ccttgtggtgacaggtttgagagagaaacccgcatctcgatcttcggtgctcttgtgcac
agtcgcacttatgacatggatgtgcgactagacctgccccctgtgccagatagtgcagac
ctctctggactggccattaaggtccctcaaagtgtggatcagtgggaagatgaagggttc
cagtcagcatccaatttgactcctgattctcagtctgaaccaagcatgaccccagatgtg
gacctgtgggaagctgccctcacgtatgagcccagcaagcggaggtgctgggagcgagtg
ggatgcccccctggccacaaagaggagccctacctcactgaagcgggaagggacgccttt
gacaggttctgcaggctccgccaaggtgagcttcaggcgctcagtgggggcctcctgcag
gccccaaggcccatgttggtgaaggagcaagagctggtgaaggactcgctgaacgtcctg
cttggggtggtgtccgccacgttctccctctgccagctctctcaggcctttgttgtggag
cggggtgtccacgtgtcaggggcttctcccgagagcatcagcagtatcctgtcagaggtg
gctgagtatgggacctgctacacacgcctgagccacttctccctgcagcccgtgctgggc
gcctcctgcagcaggggccttgtgtttcaggccttcaccagcggcttgaggcggtacctg
cagtactaccgggcctgcgtcctcgccaccccgcccacactcagcctcctcaccattggc
tttctctttaagaagttgggccggcagctcaggtacctggctgagctttgtggtgttggc
actgtgctccctgggtccagcggaggagagcccggggatgcattccctaccggggtgaag
ctgctgtcctacctctaccaggaagccctggacaactgcagcaatgagcactaccctgtg
ctgctgtccctgctgaagacaagctgtgagccctatacacggttcattcatgactgggtg
tacagcggggtcttcagagacgtgtatggggagttcatgatccaggtgaaccacgagtac
cttggcttcagagacaagttttactggacccatggctatgtgctcatctccaaagaggtg
gaggactgtgtgcctgtgttcctgaagcacattgcccacgacgtgtacgtctgtgggaag
accatcaacctgctgaagctctgctgtccccggcactacctctgttggtcggatgtccct
gtgcctcgcatttcggtgattttctccctggaggagttgaaggagatagagaaggactgt
gctgtctacgttgggcggatggagagggttgcccgccacagctccatcagcaaggaggag
aaggaactacgtatggaaattgcaaaacaagaattaattgtccatgcccgggaagcagcc
tccagggtcctgagtgagctgagcgaccggcagatgtccgagcagatggccttggatgcc
cggaagcgagagcaatttcagcgtctaaaggagcagtttgtgaaggaccaggagcgacgc
ctggcggcccgacaggaagaactggaagatgacttcagctatgctcgtgaggtccgggac
cgagagaagcggctgacagccctggaggaagagctggacaggaaggccaggcaggcactg
gtggaccactatagcaagttgtctgcagaggcagctcgtcgggagcagagggcactgtgg
agaatccagaggcaccgactggaaagtgcacggcttcgttttttcctagaagatgaaaag
cgtgtccaggagatgctgaagaacgtggctgaggcttgccagccccaggagctgctgggt
cacctcccaggtacctgctcccaggtcaatgccctgttgcaggtcacatctccaggccct
gagcacccagacagaggtcctacctgtaattcagcacccacagagctgcacttggctgcc
tgggattgtccaggcaggccgagtgtgcccactacgcaggccattgagtctccagcagtt
ggggctggtggctcggggaccaggctggcagagggggctgagccgttctctgctggcctc
agcatcacagacttcctgcccttgggtcccagcgctgagcagcctgtgcagaccaacagg
gcccttcccctggaggaggcgctgcagaccatcagctcagacctgcctgccgtttcccct
ggggaggcccatgccacagctagtacacagcctgcccagccacaggagtacgacttcagc
accgtcctgaggccagctgcggccacctcaccttcctcaggtcccctccaggctgttgag
ggcagcttgggccctgaggagcacgcgccatgggagggcacgcatgagggcacacagatg
gctctgtcccccccactcaggcatgtcacctctgaggagggaagcaaccggcccacaggg
cagctccataggcatgtgtcagatgccagcatcagggtaggggagaacatgccagacgtg
gctccctcccggccacggtggaacgtccacgggcacgtgtcagatgccagcatcagggtg
ggagagaacagaccagaagctgagcccaacccaccctggccccaccagagcccccctagc
cacgtttctcaggcaggctcaagcctggaagtacagaaccctgccctggaacatgggcca
cagctacctgcagacatggagccttccatctgctgtcccaatgtgggcagcctgcagacc
ttgccctctgctgcgtccaagtccagcactttgggagacagtgtctctgaggagccaggt
gcagggaagaatggtgacaatgatgacctctctccaagctggcctccaaactctcaggtt
ggaaggacgcagcctggggaggggagcatgcagggagccccacatgcccttttccaacac
aaaccccagggggcctgggagcagctgctgggtggggtgcccaccttgagtttggattct
caggaaggcacagctgccccgagcagccctgaggcagcagctgaggtggaggctctgcgc
tggggcaaggagcaggcctatgtggcaggcctggccagtcggtaccgcctggagcagtac
ccggacagctacgagtccatgtcggaggcccccgctgcccacctggtacgccacgtgctt
ccccgggcctttgccttccccgtggacccccgggtgcagtcggctgtggacgagaccacg
gtgcagctgaccgagctgctgacgctgccggtgctcatgcagcgctcccttactgccccg
ctggctgcccacgtctccctggtgaacaaagctgcggtggactacttctttgcggagctg
cacctggaggcgcactttgaggctttgcggcacttcctgctgatggaggatggggagttt
gcccagtccctgagtgacttgctctttgagaagctcggggctgggcagacacccggggaa
ctgctcaaccccctggtcctcaactgcatcctgagcaaggccctccagtacagcctccat
ggggacaccccacatgccaccaacctctccttcgccctcaagtacctgcctgaagtgttt
gctcccaatgccccggatgtgctgagctgcctggagctcaggtacaaggtcgactggccc
ctcaacatcgtcatcaccgagaactgcctgagcaagtacagcggcatcttctccttcctg
ctgcagctgaagctcatgatgtggacgctcaaggacatctgcttccacctcaagcgtaca
gccctggtgagccacgcagctggctcggtgcagttccgccagctgcagctgttcaaacac
gagatgcagcactttgtgaaggtcacccagggctacatcgccaaccagatcctgcacgtc
agctggtgtgagttcagggcccggctggccacagtgggcaaccttgaggagatccagcgc
gcccatgcagagtacctgcacaaggctgtcttcaggggcctgctcacggagaaggcagca
ccggtcatgaacatcatccatagcattttcagcctggtgctgaagttccgcagccagctc
atctcccaggcctggggcccagccagtggcccccggggtgccgagcaccccaactttgct
ctcatgcagcagtcctacagtaccttcaagtactactcccacttcctcttcaaagtggtg
accaaattggtgaaccgtggctaccagccccacctcgaggacttcttgctgcgcatcaac
ttcaacagctactaccaggactcctga
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